MGE detailed information
MGE type: Genomic_island MGE length: 42635 bp
Accession: NZ_CP084586 Location: 971543..1014177 Organism: Mycobacterium intracellulare subsp. chimaera strain 852 Replicon: chromosome
Accession: NZ_CP084586 Location: 971543..1014177 Organism: Mycobacterium intracellulare subsp. chimaera strain 852 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LFT50_RS04780 (LFT50_04780) | 967507..968400 | + | 894 | WP_007168453.1 | SDR family oxidoreductase | - |
| LFT50_RS04785 (LFT50_04785) | 968431..970050 | + | 1620 | WP_007168454.1 | class I adenylate-forming enzyme family protein | - |
| LFT50_RS04790 (LFT50_04790) | 970298..971419 | + | 1122 | WP_050790029.1 | acyl-CoA dehydrogenase family protein | - |
| LFT50_RS04795 (LFT50_04795) | 971543..972628 | + | 1086 | WP_224112852.1 | transposase | - |
| LFT50_RS04800 (LFT50_04800) | 973094..974311 | + | 1218 | WP_007168458.1 | acyl-CoA dehydrogenase family protein | - |
| LFT50_RS04805 (LFT50_04805) | 974838..975446 | - | 609 | WP_224112853.1 | Insertion sequence IS5376 putative ATP-binding protein | VF |
| LFT50_RS04810 (LFT50_04810) | 975443..976849 | - | 1407 | WP_007168461.1 | IS481 family transposase ISGur11 | Transposase |
| LFT50_RS04815 (LFT50_04815) | 976896..977054 | - | 159 | Protein_947 | hypothetical protein | - |
| LFT50_RS04820 (LFT50_04820) | 977041..977928 | - | 888 | Protein_948 | DNA-binding protein | - |
| LFT50_RS04825 (LFT50_04825) | 978024..979109 | - | 1086 | Protein_949 | succinyldiaminopimelate transaminase | - |
| LFT50_RS04830 (LFT50_04830) | 979172..979498 | - | 327 | WP_007168467.1 | ferredoxin family protein | - |
| LFT50_RS04835 (LFT50_04835) | 979847..980125 | + | 279 | WP_007168468.1 | IS3 family transposase ISMyma8 | Transposase |
| LFT50_RS04840 (LFT50_04840) | 980122..980277 | + | 156 | WP_154074411.1 | hypothetical protein | - |
| LFT50_RS04845 (LFT50_04845) | 980353..980802 | + | 450 | WP_007168470.1 | IS3 family transposase ISMyma8 | Transposase |
| LFT50_RS04850 (LFT50_04850) | 981206..981439 | + | 234 | Protein_954 | hypothetical protein | - |
| LFT50_RS04855 (LFT50_04855) | 981664..982063 | + | 400 | Protein_955 | alpha/beta hydrolase | - |
| LFT50_RS04860 (LFT50_04860) | 982111..983145 | + | 1035 | WP_219859229.1 | dihydrodipicolinate reductase | - |
| LFT50_RS04865 (LFT50_04865) | 983462..984106 | + | 645 | WP_230493326.1 | cation:proton antiporter | - |
| LFT50_RS04870 (LFT50_04870) | 984128..984637 | + | 510 | Protein_958 | IS256 family transposase ISArsp4 | Transposase |
| LFT50_RS04875 (LFT50_04875) | 984670..985485 | - | 816 | WP_007168475.1 | IS30 family transposase ISBlo4 | Transposase |
| LFT50_RS04880 (LFT50_04880) | 985571..985852 | - | 282 | WP_136244823.1 | hypothetical protein | - |
| LFT50_RS30930 | 985982..986788 | - | 807 | WP_230484171.1 | IS256 family transposase ISPaes3 | Transposase |
| LFT50_RS30935 | 986769..987329 | - | 561 | WP_080691073.1 | IS256 family transposase ISRo1 | Transposase |
| LFT50_RS04890 (LFT50_04890) | 987409..987808 | + | 400 | Protein_963 | replicative DNA helicase | - |
| LFT50_RS04895 (LFT50_04895) | 987832..988080 | + | 249 | Protein_964 | transposase | - |
| LFT50_RS04900 (LFT50_04900) | 988237..989421 | + | 1185 | WP_040624521.1 | IS30 family transposase | - |
| LFT50_RS30940 | 989523..989618 | - | 96 | WP_230484118.1 | hypothetical protein | - |
| LFT50_RS04910 (LFT50_04910) | 989751..989843 | - | 93 | Protein_967 | ATPase | - |
| LFT50_RS30945 | 989887..990009 | + | 123 | WP_255250777.1 | hypothetical protein | - |
| LFT50_RS04915 (LFT50_04915) | 991457..991762 | - | 306 | WP_007168485.1 | hypothetical protein | - |
| LFT50_RS04920 (LFT50_04920) | 991823..992164 | - | 342 | WP_007168486.1 | hypothetical protein | - |
| LFT50_RS04925 (LFT50_04925) | 992185..992592 | - | 408 | WP_007168487.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| LFT50_RS04930 (LFT50_04930) | 992596..992868 | - | 273 | WP_033711258.1 | type II toxin-antitoxin system prevent-host-death family antitoxin | Antitoxin Detail |
| LFT50_RS04935 (LFT50_04935) | 993364..994599 | - | 1236 | WP_042909886.1 | IS256 family transposase IS1512 | Transposase |
| LFT50_RS04940 (LFT50_04940) | 995241..995426 | + | 186 | WP_132160383.1 | hypothetical protein | - |
| LFT50_RS04945 (LFT50_04945) | 995500..995916 | - | 417 | WP_007168492.1 | type II toxin-antitoxin system VapC family toxin | - |
| LFT50_RS04950 (LFT50_04950) | 995913..996164 | - | 252 | WP_007168493.1 | ribbon-helix-helix protein, CopG family | - |
| LFT50_RS04955 (LFT50_04955) | 996966..997361 | + | 396 | WP_007168495.1 | hypothetical protein | - |
| LFT50_RS04960 (LFT50_04960) | 997358..998029 | + | 672 | WP_007168496.1 | RES family NAD+ phosphorylase | - |
| LFT50_RS04970 (LFT50_04970) | 999067..999519 | + | 453 | WP_036428428.1 | hypothetical protein | - |
| LFT50_RS04975 (LFT50_04975) | 1000004..1001167 | - | 1164 | WP_008253492.1 | nucleotidyltransferase | - |
| LFT50_RS04980 (LFT50_04980) | 1001170..1002147 | - | 978 | WP_151458148.1 | CBASS cGAMP-activated phospholipase | - |
| LFT50_RS04985 (LFT50_04985) | 1002307..1003335 | + | 1029 | WP_008253494.1 | XRE family transcriptional regulator | - |
| LFT50_RS04990 (LFT50_04990) | 1003761..1004927 | - | 1167 | WP_136244620.1 | hypothetical protein | - |
| LFT50_RS04995 (LFT50_04995) | 1005950..1006918 | + | 969 | WP_036428439.1 | hypothetical protein | - |
| LFT50_RS05000 (LFT50_05000) | 1006984..1009218 | + | 2235 | WP_008253497.1 | hypothetical protein | - |
| LFT50_RS05005 (LFT50_05005) | 1009482..1010441 | + | 960 | WP_008253498.1 | hypothetical protein | - |
| LFT50_RS05010 (LFT50_05010) | 1010475..1010750 | + | 276 | WP_008253499.1 | hypothetical protein | - |
| LFT50_RS05015 (LFT50_05015) | 1011190..1012125 | + | 936 | WP_008253501.1 | hypothetical protein | - |
| LFT50_RS05020 (LFT50_05020) | 1012325..1013164 | - | 840 | WP_069433435.1 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | - |
| LFT50_RS05025 (LFT50_05025) | 1013161..1014177 | - | 1017 | WP_036429123.1 | hypothetical protein | - |
| LFT50_RS05035 (LFT50_05035) | 1014626..1015465 | - | 840 | WP_008253525.1 | mycofactocin-coupled SDR family oxidoreductase | - |
| LFT50_RS05040 (LFT50_05040) | 1015624..1016178 | - | 555 | WP_085976474.1 | TetR/AcrR family transcriptional regulator | - |
| LFT50_RS05045 (LFT50_05045) | 1016365..1016565 | + | 201 | WP_014710945.1 | ferredoxin | - |
| LFT50_RS05050 (LFT50_05050) | 1016606..1017886 | + | 1281 | WP_014710946.1 | cytochrome P450 | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|