MGE detailed information
MGE type: Conjugative plasmid MGE length: 145051 bp
Accession: NZ_CP084543 Location: 1..145051 Organism: Klebsiella michiganensis strain YL9 Replicon: plasmid p1
Accession: NZ_CP084543 Location: 1..145051 Organism: Klebsiella michiganensis strain YL9 Replicon: plasmid p1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LD277_RS29025 (LD277_29060) | 1..312 | + | 312 | WP_000338945.1 | hypothetical protein | - |
| LD277_RS29030 (LD277_29065) | 486..1271 | + | 786 | WP_001151304.1 | Sporulation initiation inhibitor protein Soj | VF |
| LD277_RS29035 (LD277_29070) | 1275..2456 | + | 1182 | WP_001207227.1 | KorB domain-containing protein | - |
| LD277_RS29040 (LD277_29075) | 2505..2777 | + | 273 | WP_000703827.1 | helix-turn-helix domain-containing protein | - |
| LD277_RS29045 (LD277_29080) | 2830..3465 | - | 636 | WP_238971907.1 | N-6 DNA methylase | - |
| LD277_RS29050 (LD277_29085) | 3557..3700 | - | 144 | WP_000939033.1 | hypothetical protein | - |
| LD277_RS29055 (LD277_29090) | 4019..4396 | + | 378 | WP_001125905.1 | hypothetical protein | - |
| LD277_RS29060 (LD277_29095) | 4389..4670 | + | 282 | WP_000044824.1 | hypothetical protein | - |
| LD277_RS29065 (LD277_29100) | 4645..5319 | + | 675 | WP_000344151.1 | thymidylate kinase | - |
| LD277_RS29070 (LD277_29105) | 5312..5818 | + | 507 | WP_000566600.1 | hypothetical protein | - |
| LD277_RS29075 (LD277_29110) | 5824..6135 | + | 312 | WP_002210541.1 | hypothetical protein | - |
| LD277_RS29080 (LD277_29115) | 6144..6644 | + | 501 | WP_000647189.1 | hypothetical protein | - |
| LD277_RS29085 (LD277_29120) | 6648..8075 | + | 1428 | WP_000936896.1 | DNA cytosine methyltransferase | - |
| LD277_RS29090 (LD277_29125) | 8075..8731 | + | 657 | WP_000268551.1 | hypothetical protein | - |
| LD277_RS29095 (LD277_29130) | 8937..9155 | + | 219 | WP_000362482.1 | hypothetical protein | - |
| LD277_RS29100 (LD277_29135) | 9249..9866 | + | 618 | WP_000464631.1 | hypothetical protein | - |
| LD277_RS29105 (LD277_29140) | 10099..10377 | + | 279 | WP_014386427.1 | hypothetical protein | - |
| LD277_RS29110 (LD277_29145) | 10469..10957 | - | 489 | WP_000468105.1 | hypothetical protein | - |
| LD277_RS29115 (LD277_29150) | 10972..13164 | - | 2193 | WP_000366822.1 | DNA topoisomerase 3 | - |
| LD277_RS29120 (LD277_29155) | 13164..13397 | - | 234 | WP_001191892.1 | hypothetical protein | - |
| LD277_RS29125 (LD277_29160) | 13379..13996 | - | 618 | WP_001249396.1 | hypothetical protein | - |
| LD277_RS29130 (LD277_29165) | 14164..17142 | + | 2979 | WP_001337757.1 | hypothetical protein | Relaxase |
| LD277_RS29135 (LD277_29170) | 17139..19004 | + | 1866 | WP_000178856.1 | conjugative transfer system coupling protein TraD | - |
| LD277_RS29140 (LD277_29175) | 19054..19599 | + | 546 | WP_000228720.1 | hypothetical protein | - |
| LD277_RS29145 (LD277_29180) | 19556..20185 | + | 630 | WP_000743450.1 | DUF4400 domain-containing protein | - |
| LD277_RS29150 (LD277_29185) | 20195..20641 | + | 447 | WP_000122506.1 | hypothetical protein | - |
| LD277_RS29155 (LD277_29190) | 20651..21028 | + | 378 | WP_000869261.1 | hypothetical protein | - |
| LD277_RS29160 (LD277_29195) | 21028..21690 | + | 663 | WP_001231463.1 | hypothetical protein | - |
| LD277_RS29165 (LD277_29200) | 21871..22014 | + | 144 | WP_001275801.1 | hypothetical protein | - |
| LD277_RS29170 (LD277_29205) | 22026..22391 | + | 366 | WP_001052531.1 | hypothetical protein | - |
| LD277_RS29175 (LD277_29210) | 22536..22817 | + | 282 | WP_000805625.1 | type IV conjugative transfer system protein TraL | - |
| LD277_RS29180 (LD277_29215) | 22814..23440 | + | 627 | WP_001049716.1 | TraE/TraK family type IV conjugative transfer system protein | - |
| LD277_RS29185 (LD277_29220) | 23424..24341 | + | 918 | WP_000794249.1 | type-F conjugative transfer system secretin TraK | - |
| LD277_RS29190 (LD277_29225) | 24341..25654 | + | 1314 | WP_024131605.1 | TraB/VirB10 family protein | - |
| LD277_RS29195 (LD277_29230) | 25651..26229 | + | 579 | WP_000793435.1 | type IV conjugative transfer system lipoprotein TraV | - |
| LD277_RS29200 (LD277_29235) | 26233..26625 | + | 393 | WP_000479535.1 | TraA family conjugative transfer protein | - |
| LD277_RS29205 (LD277_29240) | 26826..32357 | + | 5532 | WP_000606833.1 | Ig-like domain-containing protein | - |
| LD277_RS29210 (LD277_29245) | 32506..33213 | + | 708 | WP_001259347.1 | DsbC family protein | - |
| LD277_RS29215 (LD277_29250) | 33210..35657 | + | 2448 | WP_000637386.1 | type IV secretion system protein TraC | - |
| LD277_RS29220 (LD277_29255) | 35672..35989 | + | 318 | WP_000351984.1 | hypothetical protein | - |
| LD277_RS29225 (LD277_29260) | 35986..36516 | + | 531 | WP_001010738.1 | S26 family signal peptidase | - |
| LD277_RS29230 (LD277_29265) | 36479..37744 | + | 1266 | WP_000621288.1 | TrbC family F-type conjugative pilus assembly protein | - |
| LD277_RS29235 (LD277_29270) | 37741..38412 | + | 672 | WP_001337754.1 | EAL domain-containing protein | - |
| LD277_RS29240 (LD277_29275) | 38412..39416 | + | 1005 | WP_043940352.1 | TraU family protein | - |
| LD277_RS29245 (LD277_29280) | 39532..42330 | + | 2799 | WP_001256487.1 | conjugal transfer mating pair stabilization protein TraN | - |
| LD277_RS29250 (LD277_29285) | 42369..43229 | - | 861 | WP_000709517.1 | hypothetical protein | - |
| LD277_RS29255 (LD277_29290) | 43352..43993 | - | 642 | WP_000796664.1 | hypothetical protein | - |
| LD277_RS29260 (LD277_29295) | 44287..44607 | + | 321 | WP_000547566.1 | hypothetical protein | - |
| LD277_RS29265 (LD277_29300) | 44911..45096 | + | 186 | WP_001186917.1 | hypothetical protein | - |
| LD277_RS29270 (LD277_29305) | 45316..46284 | + | 969 | WP_000085162.1 | CbbQ/NirQ/NorQ C-terminal domain-containing protein | - |
| LD277_RS29275 (LD277_29310) | 46295..47203 | + | 909 | WP_000739139.1 | hypothetical protein | - |
| LD277_RS29280 (LD277_29315) | 47264..47794 | + | 531 | WP_000987165.1 | single-stranded DNA-binding protein | - |
| LD277_RS29285 (LD277_29320) | 47889..48878 | + | 990 | WP_001282585.1 | phage recombination protein Bet | - |
| LD277_RS29290 (LD277_29325) | 48941..49951 | + | 1011 | WP_000706865.1 | YqaJ viral recombinase family protein | - |
| LD277_RS29295 (LD277_29330) | 50151..51428 | + | 1278 | WP_000170086.1 | DUF3150 domain-containing protein | - |
| LD277_RS29300 (LD277_29335) | 51513..53309 | + | 1797 | WP_000039318.1 | VWA domain-containing protein | - |
| LD277_RS29305 (LD277_29340) | 53371..53706 | + | 336 | WP_001071288.1 | hypothetical protein | - |
| LD277_RS29310 (LD277_29345) | 53971..54510 | + | 540 | WP_000018872.1 | hypothetical protein | - |
| LD277_RS29315 (LD277_29350) | 54601..55101 | + | 501 | WP_000793769.1 | hypothetical protein | - |
| LD277_RS29320 (LD277_29355) | 55175..56059 | + | 885 | WP_000477209.1 | hypothetical protein | - |
| LD277_RS29325 (LD277_29360) | 56125..56349 | + | 225 | WP_001102700.1 | class I ribonucleotide reductase maintenance protein YfaE | - |
| LD277_RS29330 (LD277_29365) | 56411..56800 | + | 390 | WP_000026577.1 | hypothetical protein | - |
| LD277_RS29335 (LD277_29370) | 56790..57242 | + | 453 | WP_001176699.1 | hypothetical protein | - |
| LD277_RS29340 (LD277_29375) | 57580..57771 | + | 192 | WP_000651508.1 | hypothetical protein | - |
| LD277_RS29345 (LD277_29380) | 57840..58193 | + | 354 | WP_000994741.1 | hypothetical protein | - |
| LD277_RS29350 (LD277_29385) | 58385..58729 | + | 345 | WP_000209093.1 | hypothetical protein | - |
| LD277_RS29355 (LD277_29390) | 58807..59109 | + | 303 | WP_000410925.1 | hypothetical protein | - |
| LD277_RS29360 (LD277_29395) | 59187..60812 | + | 1626 | WP_000201432.1 | DNA cytosine methyltransferase | - |
| LD277_RS29365 (LD277_29400) | 60873..61304 | + | 432 | WP_000687894.1 | hypothetical protein | - |
| LD277_RS29370 (LD277_29405) | 61378..61932 | + | 555 | WP_001093868.1 | hypothetical protein | - |
| LD277_RS29375 (LD277_29410) | 62165..62551 | + | 387 | WP_000042274.1 | hypothetical protein | - |
| LD277_RS29380 (LD277_29415) | 62639..65092 | + | 2454 | WP_001187970.1 | phosphoadenosine phosphosulfate reductase | - |
| LD277_RS29385 (LD277_29420) | 65294..65497 | + | 204 | WP_000050848.1 | hypothetical protein | - |
| LD277_RS29390 (LD277_29425) | 65569..66174 | + | 606 | WP_000071870.1 | 5'-deoxynucleotidase | - |
| LD277_RS29395 (LD277_29430) | 66167..66436 | + | 270 | WP_000184110.1 | hypothetical protein | - |
| LD277_RS29400 (LD277_29435) | 66450..66668 | + | 219 | WP_000260293.1 | hypothetical protein | - |
| LD277_RS29405 (LD277_29440) | 66742..67299 | + | 558 | WP_000064431.1 | pyruvate dehydrogenase | - |
| LD277_RS29410 (LD277_29445) | 67374..68225 | + | 852 | WP_000595210.1 | hypothetical protein | - |
| LD277_RS29415 (LD277_29450) | 68683..69069 | + | 387 | WP_001077335.1 | hypothetical protein | - |
| LD277_RS29420 (LD277_29455) | 69247..70974 | + | 1728 | WP_000122923.1 | toprim domain-containing protein | - |
| LD277_RS29425 (LD277_29460) | 70961..71239 | + | 279 | WP_000268337.1 | hypothetical protein | - |
| LD277_RS29430 (LD277_29465) | 71312..71551 | + | 240 | WP_000714162.1 | permease | - |
| LD277_RS29435 (LD277_29470) | 71561..71677 | + | 117 | WP_000338626.1 | hypothetical protein | - |
| LD277_RS29440 (LD277_29475) | 71798..72223 | + | 426 | WP_238971908.1 | hypothetical protein | - |
| LD277_RS29445 (LD277_29480) | 72166..72924 | - | 759 | WP_238971909.1 | IS5 family transposase ISSod6 | Transposase |
| LD277_RS29450 (LD277_29485) | 73172..73897 | + | 726 | WP_000988732.1 | hypothetical protein | - |
| LD277_RS29455 (LD277_29490) | 74138..78292 | + | 4155 | WP_014342219.1 | Putative deoxyribonuclease RhsC | VF |
| LD277_RS29460 (LD277_29495) | 78289..78561 | + | 273 | WP_000787563.1 | MafI family immunity protein | - |
| LD277_RS29465 (LD277_29500) | 78856..79155 | + | 300 | WP_011872911.1 | hypothetical protein | - |
| LD277_RS29470 (LD277_29505) | 79322..79774 | + | 453 | WP_000791469.1 | hypothetical protein | - |
| LD277_RS29475 (LD277_29510) | 79790..80392 | - | 603 | WP_000278322.1 | hypothetical protein | - |
| LD277_RS29480 (LD277_29515) | 80654..80935 | + | 282 | WP_000575657.1 | hypothetical protein | - |
| LD277_RS29485 (LD277_29520) | 81234..81770 | + | 537 | WP_000949433.1 | hypothetical protein | - |
| LD277_RS29490 (LD277_29525) | 81773..82783 | + | 1011 | WP_000543934.1 | IS91 family transposase ISWz1 | Transposase |
| LD277_RS29495 (LD277_29530) | 82788..83657 | + | 870 | WP_000997323.1 | 3'-5' exonuclease | - |
| LD277_RS29500 (LD277_29535) | 83654..84064 | + | 411 | WP_238971910.1 | hypothetical protein | - |
| LD277_RS29505 (LD277_29540) | 84377..85252 | + | 876 | WP_001097010.1 | DNA replication terminus site-binding protein | - |
| LD277_RS29510 (LD277_29545) | 85345..85950 | - | 606 | WP_000509966.1 | Tn3 family transposase TnpR_Tn5403 | Transposase |
| LD277_RS29515 (LD277_29550) | 86045..88942 | + | 2898 | WP_001553819.1 | Tn3 family transposase TnpA_Tn5403 | Transposase |
| LD277_RS29520 (LD277_29555) | 89092..90132 | + | 1041 | WP_000101568.1 | DNA-binding protein | - |
| LD277_RS29525 (LD277_29560) | 90419..90793 | + | 375 | Protein_100 | DNA helicase | - |
| LD277_RS29530 (LD277_29565) | 91000..91902 | - | 903 | Protein_101 | Methyl-accepting chemotaxis protein McpQ | VF |
| LD277_RS29535 (LD277_29570) | 91956..92660 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| LD277_RS29540 (LD277_29575) | 92723..93187 | + | 465 | Protein_103 | IS6-like element IS6100 family transposase | - |
| LD277_RS29545 (LD277_29580) | 93278..94177 | - | 900 | WP_020956917.1 | Extended-spectrum beta-lactamase PER-1 | ARG |
| LD277_RS29550 (LD277_29585) | 94288..94899 | - | 612 | WP_238971911.1 | IS91 family transposase ISWz1 | Transposase |
| LD277_RS29555 (LD277_29590) | 95147..96274 | + | 1128 | WP_099531397.1 | ISAs1 family transposase ISVsa13 | Transposase |
| LD277_RS29560 (LD277_29595) | 96596..96943 | + | 348 | WP_000679427.1 | Multidrug transporter EmrE | ARG |
| LD277_RS29565 (LD277_29600) | 96937..97776 | + | 840 | WP_000259031.1 | Dihydropteroate synthase | ARG |
| LD277_RS29570 (LD277_29605) | 98181..99722 | + | 1542 | WP_000050481.1 | IS91 family transposase ISVsa3 | Transposase |
| LD277_RS29575 (LD277_29610) | 99900..100778 | - | 879 | WP_238971912.1 | hypothetical protein | - |
| LD277_RS29580 (LD277_29615) | 100823..101017 | - | 195 | WP_000757530.1 | DUF2997 domain-containing protein | - |
| LD277_RS29585 (LD277_29620) | 101066..101458 | - | 393 | WP_000018404.1 | hypothetical protein | - |
| LD277_RS29590 (LD277_29625) | 101463..101792 | - | 330 | WP_000277953.1 | hypothetical protein | - |
| LD277_RS29595 (LD277_29630) | 101948..103411 | - | 1464 | WP_001280522.1 | AAA family ATPase | - |
| LD277_RS29600 (LD277_29635) | 103485..104417 | - | 933 | WP_000434071.1 | hypothetical protein | - |
| LD277_RS29605 (LD277_29640) | 104979..105476 | - | 498 | WP_000062185.1 | hypothetical protein | - |
| LD277_RS29610 (LD277_29645) | 105479..105967 | - | 489 | WP_001273096.1 | DUF1643 domain-containing protein | - |
| LD277_RS29615 (LD277_29650) | 106064..106399 | + | 336 | WP_000683476.1 | hypothetical protein | - |
| LD277_RS29620 (LD277_29655) | 106414..106884 | - | 471 | WP_001281821.1 | hypothetical protein | - |
| LD277_RS29625 (LD277_29660) | 106877..107248 | - | 372 | WP_000516916.1 | hypothetical protein | - |
| LD277_RS29630 (LD277_29665) | 107259..107453 | - | 195 | WP_000343597.1 | hypothetical protein | - |
| LD277_RS29635 (LD277_29670) | 107794..108342 | - | 549 | WP_001061574.1 | transcriptional regulator | - |
| LD277_RS29640 (LD277_29675) | 108505..108855 | + | 351 | WP_000270043.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| LD277_RS29645 (LD277_29680) | 108860..109162 | + | 303 | WP_000124640.1 | XRE family transcriptional regulator | Antitoxin Detail |
| LD277_RS29650 (LD277_29685) | 109189..109482 | - | 294 | WP_001239997.1 | chromosome segregation protein ParM | - |
| LD277_RS29655 (LD277_29690) | 109570..109842 | - | 273 | WP_001043047.1 | HU family DNA-binding protein | - |
| LD277_RS29660 (LD277_29695) | 109900..110427 | - | 528 | WP_001236377.1 | thermonuclease family protein | - |
| LD277_RS29665 (LD277_29700) | 110658..111515 | - | 858 | WP_001167032.1 | hypothetical protein | - |
| LD277_RS29670 (LD277_29705) | 111502..111732 | - | 231 | WP_000972663.1 | hypothetical protein | - |
| LD277_RS29675 (LD277_29710) | 111732..112250 | - | 519 | WP_000210756.1 | nitrite reductase | - |
| LD277_RS29680 (LD277_29715) | 112247..112693 | - | 447 | WP_000919345.1 | Fe3+-siderophore ABC transporter permease | - |
| LD277_RS29685 (LD277_29720) | 112693..113052 | - | 360 | WP_000422768.1 | hypothetical protein | - |
| LD277_RS29690 (LD277_29725) | 113109..113537 | - | 429 | WP_000591074.1 | hypothetical protein | - |
| LD277_RS29695 (LD277_29730) | 113571..114431 | - | 861 | WP_000139698.1 | DsbA family protein | - |
| LD277_RS29700 (LD277_29735) | 114447..115406 | - | 960 | WP_000829616.1 | S49 family peptidase | - |
| LD277_RS29705 (LD277_29740) | 115406..116260 | - | 855 | WP_000539392.1 | hypothetical protein | - |
| LD277_RS29710 (LD277_29745) | 116265..116558 | - | 294 | WP_001370730.1 | hypothetical protein | - |
| LD277_RS29715 (LD277_29750) | 116569..117042 | - | 474 | WP_000057877.1 | hypothetical protein | - |
| LD277_RS29720 (LD277_29755) | 117139..117660 | - | 522 | WP_000805800.1 | hypothetical protein | - |
| LD277_RS29725 (LD277_29760) | 117663..118184 | - | 522 | WP_000393785.1 | hypothetical protein | - |
| LD277_RS29730 (LD277_29765) | 118189..118797 | - | 609 | WP_000849071.1 | hypothetical protein | - |
| LD277_RS29735 (LD277_29770) | 119066..120181 | + | 1116 | WP_000946102.1 | phosphoadenosine phosphosulfate reductase family protein | - |
| LD277_RS29740 (LD277_29775) | 120199..120633 | + | 435 | WP_000883925.1 | hypothetical protein | - |
| LD277_RS29745 (LD277_29780) | 121670..122770 | - | 1101 | WP_000350011.1 | RepB family plasmid replication initiator protein | - |
| LD277_RS29750 (LD277_29785) | 122755..123042 | - | 288 | WP_000127321.1 | hypothetical protein | - |
| LD277_RS29755 (LD277_29790) | 123047..123586 | - | 540 | WP_001447712.1 | conjugative transfer protein MobI(A/C) | - |
| LD277_RS29760 (LD277_29795) | 124085..125068 | + | 984 | WP_000077458.1 | ParM/StbA family protein | - |
| LD277_RS29765 (LD277_29800) | 125085..125378 | + | 294 | WP_000919078.1 | hypothetical protein | - |
| LD277_RS29770 (LD277_29805) | 125380..125799 | + | 420 | WP_000651490.1 | H-NS family nucleoid-associated regulatory protein | - |
| LD277_RS29775 (LD277_29810) | 125859..126410 | - | 552 | WP_001020646.1 | FlhC family transcriptional regulator | - |
| LD277_RS29780 (LD277_29815) | 126407..127015 | - | 609 | WP_000891157.1 | hypothetical protein | - |
| LD277_RS29785 (LD277_29820) | 127026..127559 | - | 534 | WP_000790610.1 | transglycosylase SLT domain-containing protein | - |
| LD277_RS29790 (LD277_29825) | 127559..127831 | - | 273 | WP_000356489.1 | helix-turn-helix domain-containing protein | - |
| LD277_RS29795 (LD277_29830) | 128547..128909 | + | 363 | WP_000683483.1 | hypothetical protein | - |
| LD277_RS29800 (LD277_29835) | 128947..132561 | - | 3615 | WP_000534551.1 | conjugal transfer protein TraG N-terminal domain-containing protein | - |
| LD277_RS29805 (LD277_29840) | 132574..134007 | - | 1434 | WP_000256129.1 | conjugal transfer protein TraH | - |
| LD277_RS29810 (LD277_29845) | 134009..135049 | - | 1041 | WP_001326396.1 | conjugal transfer protein TraF | - |
| LD277_RS29815 (LD277_29850) | 135160..136311 | - | 1152 | Protein_158 | UvrD-helicase domain-containing protein | - |
| LD277_RS29820 (LD277_29855) | 136589..137593 | - | 1005 | WP_000427623.1 | IS110 family transposase IS4321R | Transposase |
| LD277_RS29825 (LD277_29860) | 137672..140644 | - | 2973 | WP_001138073.1 | Tn3 family transposase TnpA_TnAs3 | Transposase |
| LD277_RS29830 (LD277_29865) | 140647..141204 | - | 558 | WP_001162012.1 | Tn3 family transposase TnpR_TnAs2 | Transposase |
| LD277_RS29835 (LD277_29870) | 141501..141722 | - | 222 | Protein_162 | tyrosine-type recombinase/integrase | - |
| LD277_RS29840 (LD277_29875) | 141788..142492 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| LD277_RS29845 (LD277_29880) | 142545..143066 | - | 522 | Protein_164 | aminoglycoside phosphotransferase family protein | - |
| LD277_RS29850 (LD277_29885) | 143066..143869 | - | 804 | WP_001082319.1 | Aminoglycoside 3'-phosphotransferase | ARG |
| LD277_RS29855 (LD277_29890) | 143930..144745 | - | 816 | WP_001043260.1 | Dihydropteroate synthase | ARG |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|