MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 59372 bp
Accession: NZ_CP084533 Location: 1..59372 Organism: Salmonella enterica subsp. enterica serovar Enteritidis strain SE211 Replicon: plasmid pSE211
Accession: NZ_CP084533 Location: 1..59372 Organism: Salmonella enterica subsp. enterica serovar Enteritidis strain SE211 Replicon: plasmid pSE211
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LDP70_RS22730 (LDP70_22730) | 181..738 | + | 558 | WP_000725064.1 | Attachment invasion locus protein | VF |
| LDP70_RS22735 (LDP70_22735) | 1004..1750 | + | 747 | WP_000417897.1 | AraC family transcriptional regulator | - |
| LDP70_RS22740 (LDP70_22740) | 1847..2041 | - | 195 | Protein_3 | SdiA-regulated domain-containing protein | - |
| LDP70_RS22745 (LDP70_22745) | 2924..3805 | - | 882 | WP_001676666.1 | incFII family plasmid replication initiator RepA | - |
| LDP70_RS22750 (LDP70_22750) | 3786..3863 | - | 78 | WP_001541552.1 | RepA leader peptide Tap | - |
| LDP70_RS22755 (LDP70_22755) | 4113..4379 | - | 267 | WP_016710725.1 | replication regulatory protein RepA | - |
| LDP70_RS22760 (LDP70_22760) | 4490..5050 | - | 561 | Protein_7 | phospholipase D family protein | - |
| LDP70_RS22765 (LDP70_22765) | 5331..5612 | - | 282 | Protein_8 | disulfide bond formation protein DsbA | - |
| LDP70_RS22770 (LDP70_22770) | 5729..6151 | - | 423 | Protein_9 | fertility inhibition protein FinO | - |
| LDP70_RS22775 (LDP70_22775) | 6231..6745 | - | 515 | Protein_10 | type IV conjugative transfer system lipoprotein TraV | - |
| LDP70_RS22780 (LDP70_22780) | 6742..6966 | - | 225 | WP_016716015.1 | DUF2689 domain-containing protein | - |
| LDP70_RS22785 (LDP70_22785) | 6944..7540 | - | 597 | WP_000527901.1 | conjugal transfer pilus-stabilizing protein TraP | - |
| LDP70_RS22790 (LDP70_22790) | 7530..8951 | - | 1422 | WP_000146697.1 | F-type conjugal transfer pilus assembly protein TraB | - |
| LDP70_RS22795 (LDP70_22795) | 8951..9691 | - | 741 | WP_001230718.1 | type-F conjugative transfer system secretin TraK | - |
| LDP70_RS22800 (LDP70_22800) | 9678..10244 | - | 567 | WP_001679518.1 | type IV conjugative transfer system protein TraE | - |
| LDP70_RS22805 (LDP70_22805) | 10266..10577 | - | 312 | WP_000012130.1 | type IV conjugative transfer system protein TraL | - |
| LDP70_RS22810 (LDP70_22810) | 10592..10954 | - | 363 | WP_001274199.1 | type IV conjugative transfer system pilin TraA | - |
| LDP70_RS22815 (LDP70_22815) | 10996..11223 | - | 228 | WP_001676655.1 | conjugal transfer relaxosome protein TraY | - |
| LDP70_RS22820 (LDP70_22820) | 11317..12002 | - | 686 | Protein_19 | PAS domain-containing protein | - |
| LDP70_RS22825 (LDP70_22825) | 12196..12576 | - | 381 | WP_001151546.1 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| LDP70_RS22830 (LDP70_22830) | 12992..13462 | + | 471 | WP_015056628.1 | hypothetical protein | VF |
| LDP70_RS22835 (LDP70_22835) | 13773..14591 | - | 819 | Protein_22 | DUF945 domain-containing protein | - |
| LDP70_RS22840 (LDP70_22840) | 14694..14852 | - | 159 | WP_001704449.1 | hypothetical protein | - |
| LDP70_RS23200 | 14938..15066 | - | 129 | WP_000372430.1 | hypothetical protein | - |
| LDP70_RS22845 (LDP70_22845) | 15101..15757 | - | 657 | Protein_25 | plasmid SOS inhibition protein A | - |
| LDP70_RS22850 (LDP70_22850) | 15760..15861 | - | 102 | Protein_26 | conjugation system SOS inhibitor PsiB | - |
| LDP70_RS22855 (LDP70_22855) | 15901..17622 | - | 1722 | Protein_27 | ParB/RepB/Spo0J family partition protein | - |
| LDP70_RS22860 (LDP70_22860) | 17923..18345 | + | 423 | WP_000925628.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| LDP70_RS22865 (LDP70_22865) | 18345..19619 | + | 1275 | WP_000457542.1 | Y-family DNA polymerase | - |
| LDP70_RS22870 (LDP70_22870) | 19701..20675 | - | 975 | WP_000064277.1 | ParB family protein | - |
| LDP70_RS22875 (LDP70_22875) | 20675..21880 | - | 1206 | WP_000427676.1 | AAA family ATPase | - |
| LDP70_RS22880 (LDP70_22880) | 22295..23236 | + | 942 | WP_000728919.1 | Recombination-promoting nuclease RpnA | VF |
| LDP70_RS22885 (LDP70_22885) | 23233..23838 | - | 606 | WP_000176303.1 | DUF2913 family protein | - |
| LDP70_RS22890 (LDP70_22890) | 23895..24311 | - | 417 | WP_000988946.1 | hypothetical protein | - |
| LDP70_RS22895 (LDP70_22895) | 24414..24830 | - | 417 | WP_001541564.1 | hypothetical protein | - |
| LDP70_RS22900 (LDP70_22900) | 24916..26031 | - | 1116 | WP_001247117.1 | DNA-binding protein | - |
| LDP70_RS22905 (LDP70_22905) | 26289..26777 | + | 489 | WP_001135409.1 | hypothetical protein | - |
| LDP70_RS22910 (LDP70_22910) | 27432..28172 | + | 741 | WP_001541566.1 | carbonic anhydrase family protein | - |
| LDP70_RS22915 (LDP70_22915) | 28379..28939 | + | 561 | WP_001240330.1 | Tn3 family transposase TnBth3 | Transposase |
| LDP70_RS22920 (LDP70_22920) | 28923..30587 | + | 1665 | WP_000098781.1 | IS481 family transposase ISAzs36 | Transposase |
| LDP70_RS22925 (LDP70_22925) | 30520..31545 | + | 1026 | WP_077907510.1 | ExeA family protein | - |
| LDP70_RS22930 (LDP70_22930) | 31734..32771 | - | 1038 | WP_001121400.1 | IS630 family transposase ISEc33 | Transposase |
| LDP70_RS22935 (LDP70_22935) | 33379..34272 | + | 894 | WP_000346690.1 | virulence genes transcriptional activator SpvR | - |
| LDP70_RS22940 (LDP70_22940) | 34446..34610 | + | 165 | WP_001576629.1 | glycoside hydrolase family protein | - |
| LDP70_RS22945 (LDP70_22945) | 34784..35551 | + | 768 | WP_001676649.1 | virulence protein SpvA | - |
| LDP70_RS22950 (LDP70_22950) | 35514..35681 | + | 168 | WP_001526987.1 | hypothetical protein | - |
| LDP70_RS22955 (LDP70_22955) | 35733..37508 | + | 1776 | WP_001676648.1 | Mono(ADP-ribosyl)transferase SpvB | VF |
| LDP70_RS22960 (LDP70_22960) | 37789..38514 | + | 726 | WP_001122242.1 | MAPK phosphothreonine lyase | VF |
| LDP70_RS22965 (LDP70_22965) | 38776..39426 | + | 651 | WP_001676646.1 | SPI-2 type III secretion system effector cysteine hydrolase SpvD | - |
| LDP70_RS22970 (LDP70_22970) | 39553..39978 | - | 426 | WP_000064919.1 | IS200-IS605 family transposase ISEc46 | Transposase |
| LDP70_RS22975 (LDP70_22975) | 40035..40385 | + | 351 | WP_001541541.1 | IS200-IS605 family transposase ISEc46 | Transposase |
| LDP70_RS22980 (LDP70_22980) | 40452..40997 | - | 546 | WP_071591236.1 | Invasin | VF |
| LDP70_RS22985 (LDP70_22985) | 40892..41215 | - | 324 | WP_223163851.1 | LysM peptidoglycan-binding domain-containing protein | - |
| LDP70_RS22990 (LDP70_22990) | 41732..42217 | - | 486 | WP_000905606.1 | membrane protein | - |
| LDP70_RS22995 (LDP70_22995) | 42211..42699 | - | 489 | WP_001075507.1 | CaiF/GrlA family transcriptional regulator | - |
| LDP70_RS23000 (LDP70_23000) | 42724..43437 | - | 714 | WP_121212594.1 | Cyclic di-GMP phosphodiesterase PdeL | VF |
| LDP70_RS23005 (LDP70_23005) | 43446..44228 | - | 783 | WP_000082169.1 | site-specific integrase | - |
| LDP70_RS23010 (LDP70_23010) | 44263..44784 | - | 522 | WP_000198608.1 | hypothetical protein | - |
| LDP70_RS23015 (LDP70_23015) | 44781..45071 | - | 291 | WP_001266176.1 | hypothetical protein | - |
| LDP70_RS23020 (LDP70_23020) | 45073..45378 | - | 306 | WP_001159863.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| LDP70_RS23025 (LDP70_23025) | 45380..45598 | - | 219 | WP_000813641.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| LDP70_RS23030 (LDP70_23030) | 46274..46795 | + | 522 | WP_077681952.1 | hypothetical protein | - |
| LDP70_RS23035 (LDP70_23035) | 46839..47267 | - | 429 | Protein_63 | hypothetical protein | - |
| LDP70_RS23040 (LDP70_23040) | 47279..47574 | + | 296 | Protein_64 | cytoplasmic protein | - |
| LDP70_RS23045 (LDP70_23045) | 48068..49057 | + | 990 | WP_000461382.1 | RepB family plasmid replication initiator protein | - |
| LDP70_RS23050 (LDP70_23050) | 49426..49545 | - | 120 | Protein_66 | recombinase | - |
| LDP70_RS23055 (LDP70_23055) | 49598..49984 | - | 387 | WP_000751876.1 | YgiW/YdeI family stress tolerance OB fold protein | - |
| LDP70_RS23060 (LDP70_23060) | 50351..50662 | - | 312 | WP_015059605.1 | hypothetical protein | - |
| LDP70_RS23065 (LDP70_23065) | 50691..50993 | + | 303 | WP_000979451.1 | Major pilu subunit operon regulatory protein PapB | VF |
| LDP70_RS23070 (LDP70_23070) | 51268..51792 | + | 525 | WP_000748204.1 | hypothetical protein | VF |
| LDP70_RS23075 (LDP70_23075) | 52019..54427 | + | 2409 | WP_000007891.1 | Outer membrane usher protein FimD | VF |
| LDP70_RS23080 (LDP70_23080) | 54420..55112 | + | 693 | WP_001038509.1 | Chaperone protein FaeE | VF |
| LDP70_RS23085 (LDP70_23085) | 55109..55687 | + | 579 | WP_000085742.1 | hypothetical protein | - |
| LDP70_RS23090 (LDP70_23090) | 55783..56724 | + | 942 | WP_223156944.1 | hypothetical protein | - |
| LDP70_RS23095 (LDP70_23095) | 56984..57196 | + | 213 | WP_000004289.1 | hypothetical protein | VF |
| LDP70_RS23100 (LDP70_23100) | 57181..57531 | + | 351 | WP_000135399.1 | Transcriptional regulatory protein RcsB | VF |
| LDP70_RS23105 (LDP70_23105) | 57775..58431 | + | 657 | WP_077907617.1 | DsbA family protein | - |
| LDP70_RS23110 (LDP70_23110) | 58421..58567 | + | 147 | WP_001141717.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|