MGE detailed information
MGE type: Genomic_island MGE length: 11356 bp
Accession: NZ_CP084532 Location: 834401..845756 Organism: Salmonella enterica subsp. enterica serovar Enteritidis strain SE211 Replicon: chromosome
Accession: NZ_CP084532 Location: 834401..845756 Organism: Salmonella enterica subsp. enterica serovar Enteritidis strain SE211 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LDP70_RS03995 (829847) | 829847..830945 | + | 1099 | WP_096059418.1 | peptide chain release factor 2 | - |
| LDP70_RS04000 (830955) | 830955..832472 | + | 1518 | WP_000003339.1 | lysine--tRNA ligase | - |
| LDP70_RS04005 (832548) | 832548..833093 | - | 546 | WP_000133994.1 | isopentenyl-diphosphate Delta-isomerase | - |
| LDP70_RS04010 (833358) | 833358..834116 | + | 759 | WP_000244328.1 | amidase activator ActS | - |
| LDP70_RS04020 (834401) | 834401..835207 | - | 807 | WP_001574939.1 | DUF1460 domain-containing protein | - |
| LDP70_RS04025 (835487) | 835487..835738 | - | 252 | WP_001576352.1 | hypothetical protein | - |
| LDP70_RS04030 (835947) | 835947..836174 | + | 228 | WP_000557549.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
| LDP70_RS04035 (836174) | 836174..836572 | + | 399 | WP_000911336.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| LDP70_RS04040 (837380) | 837380..837916 | + | 537 | WP_001038502.1 | Attachment invasion locus protein | VF |
| LDP70_RS04045 (837963) | 837963..838595 | + | 633 | WP_000835265.1 | YfdX family protein | - |
| LDP70_RS04050 (839314) | 839314..839895 | + | 582 | WP_001244651.1 | putative fimbrial-like protein YbgD | VF |
| LDP70_RS04055 (840015) | 840015..842498 | + | 2484 | WP_000705505.1 | Outer membrane usher protein PapC | VF |
| LDP70_RS04060 (842539) | 842539..843282 | + | 744 | WP_000798504.1 | Chaperone protein PapD | VF |
| LDP70_RS04065 (843279) | 843279..844355 | + | 1077 | WP_000141330.1 | hypothetical protein | - |
| LDP70_RS04070 (844499) | 844499..845011 | + | 513 | WP_000336257.1 | CaiF/GrlA family transcriptional regulator | - |
| LDP70_RS04075 (844998) | 844998..845756 | + | 759 | WP_000134802.1 | transcriptional regulator | - |
| LDP70_RS04080 (845966) | 845966..846814 | - | 849 | WP_000503687.1 | nickel/cobalt efflux protein RcnA | - |
| LDP70_RS04085 (846936) | 846936..847208 | + | 273 | WP_000019953.1 | Ni(II)/Co(II)-binding transcriptional repressor RcnR | - |
| LDP70_RS04090 (847239) | 847239..848468 | - | 1230 | WP_000036838.1 | amino acid permease | - |
| LDP70_RS04095 (848610) | 848610..849065 | - | 456 | WP_001519547.1 | multidrug/biocide efflux PACE transporter | - |
| LDP70_RS04100 (849169) | 849169..850032 | + | 864 | WP_001270774.1 | LysR family transcriptional regulator | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium strain NCTC12023 | Genomic island | TA297244 | UFRD01000002 | 4451871..4463194 | 0.009 |