MGE detailed information
MGE type: Genomic_island MGE length: 19253 bp
Accession: NZ_CP084529 Location: 2214469..2233721 Organism: Escherichia coli strain Origami2-DE3 Replicon: chromosome
Accession: NZ_CP084529 Location: 2214469..2233721 Organism: Escherichia coli strain Origami2-DE3 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LFW28_RS10520 (2209948) | 2209948..2210451 | - | 504 | WP_000870592.1 | type 1 fimbria minor subunit FimG | - |
| LFW28_RS10525 (2210464) | 2210464..2210994 | - | 531 | WP_001244827.1 | type 1 fimbria minor subunit FimF | - |
| LFW28_RS10530 (2211004) | 2211004..2213640 | - | 2637 | WP_000121005.1 | fimbrial usher FimD | - |
| LFW28_RS10535 (2213707) | 2213707..2214432 | - | 726 | WP_000066547.1 | type 1 fimbria chaperone FimC | - |
| LFW28_RS10540 (2214469) | 2214469..2215008 | - | 540 | WP_000824114.1 | putative major fimbrial subunit LpfA | VF |
| LFW28_RS10545 (2215073) | 2215073..2215621 | - | 549 | WP_000695564.1 | Type-1 fimbrial protein, A chain | VF |
| LFW28_RS10550 (2216103) | 2216103..2216699 | - | 597 | WP_000044711.1 | Tyrosine recombinase XerD | VF |
| LFW28_RS10555 (2217177) | 2217177..2217779 | - | 603 | WP_000790583.1 | Tyrosine recombinase XerC | VF |
| LFW28_RS10560 (2219235) | 2219235..2219951 | + | 717 | WP_001295734.1 | N-acetylneuraminic acid outer membrane channel NanC | - |
| LFW28_RS10565 (2219971) | 2219971..2221077 | + | 1107 | WP_001309184.1 | N-acetylneuraminate epimerase | - |
| LFW28_RS10570 (2221142) | 2221142..2222122 | + | 981 | WP_000991438.1 | 9-O-acetyl-N-acetylneuraminic acid deacetylase | - |
| LFW28_RS10575 (2222232) | 2222232..2222437 | + | 206 | Protein_2081 | HNH endonuclease | - |
| LFW28_RS10580 (2222705) | 2222705..2223945 | - | 1241 | Protein_2082 | helicase YjhR | - |
| LFW28_RS10585 (2224061) | 2224061..2224192 | + | 132 | WP_001309182.1 | hypothetical protein | - |
| LFW28_RS10590 (2224683) | 2224683..2224940 | + | 258 | WP_001054376.1 | YjhX family toxin | Toxin Detail |
| LFW28_RS10595 (2224952) | 2224952..2225497 | + | 546 | WP_001309181.1 | N-acetyltransferase | Antitoxin Detail |
| LFW28_RS10600 (2225553) | 2225553..2226299 | + | 747 | WP_000354251.1 | class I SAM-dependent methyltransferase | - |
| LFW28_RS10605 (2226468) | 2226468..2226686 | + | 219 | Protein_2087 | hypothetical protein | - |
| LFW28_RS10610 (2226724) | 2226724..2226840 | + | 117 | Protein_2088 | VOC family protein | - |
| LFW28_RS10615 (2227085) | 2227085..2228206 | + | 1122 | WP_000010829.1 | M42 family metallopeptidase | - |
| LFW28_RS10620 (2228203) | 2228203..2228481 | + | 279 | WP_000722973.1 | PTS sugar transporter subunit IIB SgcB | - |
| LFW28_RS10625 (2228493) | 2228493..2229806 | + | 1314 | WP_000460843.1 | PTS sugar transporter subunit IIC SgcC | - |
| LFW28_RS10630 (2229819) | 2229819..2230625 | + | 807 | WP_000118626.1 | BtpA family protein SgcQ | - |
| LFW28_RS10635 (2230756) | 2230756..2231187 | + | 432 | WP_000606406.1 | SgcA family PTS sugar transporter subunit IIA | - |
| LFW28_RS10640 (2231199) | 2231199..2231831 | + | 633 | WP_000600622.1 | ribulose-phosphate 3 epimerase family protein | - |
| LFW28_RS10645 (2231848) | 2231848..2232630 | + | 783 | WP_000082780.1 | DeoR/GlpR family DNA-binding transcription regulator | - |
| LFW28_RS10650 (2232933) | 2232933..2233721 | + | 789 | WP_000251798.1 | IclR family transcriptional regulator | - |
| LFW28_RS10655 (2233726) | 2233726..2234631 | + | 906 | WP_000714563.1 | dihydrodipicolinate synthase family protein | - |
| LFW28_RS10660 (2234642) | 2234642..2236609 | + | 1968 | WP_000116326.1 | xylonate dehydratase YjhG | - |
| LFW28_RS10665 (2236716) | 2236716..2238065 | + | 1350 | WP_001128363.1 | GntP family permease | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|