MGE detailed information
MGE type: Prophage MGE length: 18884 bp
Accession: NZ_CP084480 Location: 1882239..1901122 Organism: Staphylococcus lugdunensis strain RMLUG1 Replicon: chromosome
Accession: NZ_CP084480 Location: 1882239..1901122 Organism: Staphylococcus lugdunensis strain RMLUG1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LFR23_RS08915 (LFR23_08910) | 1877750..1878535 | - | 786 | WP_002492308.1 | carbon-nitrogen family hydrolase | - |
| LFR23_RS08920 (LFR23_08915) | 1878670..1879293 | - | 624 | WP_002461413.1 | nitroreductase family protein | - |
| LFR23_RS08925 (LFR23_08920) | 1879487..1880899 | + | 1413 | WP_002492303.1 | SdrH family protein | - |
| LFR23_RS08930 (LFR23_08925) | 1881318..1882058 | - | 741 | WP_002461411.1 | CPBP family intramembrane metalloprotease | - |
| LFR23_RS08935 (LFR23_08930) | 1882239..1882523 | + | 285 | WP_002461410.1 | co-chaperone GroES | - |
| LFR23_RS08940 (LFR23_08935) | 1882583..1884205 | + | 1623 | WP_002461409.1 | 60 kDa chaperonin | VF |
| LFR23_RS08945 (LFR23_08940) | 1884274..1885446 | - | 1173 | WP_002492309.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| LFR23_RS08950 (LFR23_08945) | 1885460..1886134 | - | 675 | WP_002445345.1 | helix-turn-helix transcriptional regulator | - |
| LFR23_RS08955 (LFR23_08950) | 1886307..1886525 | + | 219 | WP_000153640.1 | helix-turn-helix transcriptional regulator | - |
| LFR23_RS08960 (LFR23_08955) | 1886530..1886847 | + | 318 | WP_002445364.1 | helix-turn-helix domain-containing protein | - |
| LFR23_RS08965 (LFR23_08960) | 1886844..1886990 | + | 147 | WP_002445365.1 | hypothetical protein | - |
| LFR23_RS08970 (LFR23_08965) | 1886983..1887192 | + | 210 | WP_001058489.1 | hypothetical protein | Antitoxin Detail |
| LFR23_RS08975 (LFR23_08970) | 1887195..1887518 | + | 324 | WP_002445368.1 | DUF1474 family protein | Toxin Detail |
| LFR23_RS08980 (LFR23_08975) | 1887582..1888451 | + | 870 | WP_002445370.1 | primase alpha helix C-terminal domain-containing protein | - |
| LFR23_RS08985 (LFR23_08980) | 1888465..1890174 | + | 1710 | WP_002445371.1 | DUF927 domain-containing protein | - |
| LFR23_RS08990 (LFR23_08985) | 1890522..1890887 | + | 366 | WP_002445372.1 | hypothetical protein | - |
| LFR23_RS08995 (LFR23_08990) | 1890901..1891542 | + | 642 | WP_002492310.1 | pathogenicity island protein | - |
| LFR23_RS09000 (LFR23_08995) | 1891830..1892174 | + | 345 | WP_094449183.1 | pathogenicity island protein | - |
| LFR23_RS09005 (LFR23_09000) | 1892188..1892421 | + | 234 | WP_002492317.1 | hypothetical protein | - |
| LFR23_RS09010 (LFR23_09005) | 1892433..1892954 | + | 522 | WP_002445376.1 | hypothetical protein | - |
| LFR23_RS09015 (LFR23_09010) | 1893017..1893589 | + | 573 | WP_002445377.1 | terminase small subunit | - |
| LFR23_RS09020 (LFR23_09015) | 1893869..1894378 | + | 510 | WP_002492698.1 | DUF4065 domain-containing protein | - |
| LFR23_RS09025 (LFR23_09020) | 1894371..1894979 | + | 609 | WP_002445379.1 | hypothetical protein | - |
| LFR23_RS09030 (LFR23_09025) | 1895184..1895411 | + | 228 | WP_002445380.1 | hypothetical protein | - |
| LFR23_RS09035 (LFR23_09030) | 1895483..1895599 | + | 117 | Protein_1765 | hypothetical protein | - |
| LFR23_RS09040 (LFR23_09035) | 1895854..1896768 | + | 915 | WP_002445383.1 | iron-hydroxamate ABC transporter substrate-binding protein | - |
| LFR23_RS09045 (LFR23_09040) | 1896826..1897656 | + | 831 | WP_002445384.1 | class I SAM-dependent methyltransferase | - |
| LFR23_RS09050 (LFR23_09045) | 1898577..1899863 | - | 1287 | WP_002492717.1 | aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme | - |
| LFR23_RS09055 (LFR23_09050) | 1900337..1900516 | + | 180 | WP_002461405.1 | hypothetical protein | - |
| LFR23_RS09060 (LFR23_09055) | 1900742..1901122 | + | 381 | WP_002492708.1 | GntR family transcriptional regulator | - |
| LFR23_RS09065 (LFR23_09060) | 1901119..1902006 | + | 888 | WP_002492705.1 | ABC transporter ATP-binding protein | - |
| LFR23_RS09070 (LFR23_09065) | 1902003..1902668 | + | 666 | WP_002492693.1 | ABC-2 transporter permease | - |
| LFR23_RS09075 (LFR23_09070) | 1902688..1903560 | + | 873 | WP_002461399.1 | ABC transporter ATP-binding protein | - |
| LFR23_RS09080 (LFR23_09075) | 1903560..1904288 | + | 729 | WP_002461398.1 | ABC transporter permease | - |
| LFR23_RS09085 (LFR23_09080) | 1904382..1904939 | - | 558 | WP_002492740.1 | thioredoxin family protein | - |
| LFR23_RS09090 (LFR23_09085) | 1905068..1905592 | + | 525 | WP_002477930.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|