MGE detailed information
MGE type: Prophage MGE length: 45332 bp
Accession: NZ_CP084440 Location: 2592605..2637936 Organism: Staphylococcus lugdunensis strain RMLUG4 Replicon: chromosome
Accession: NZ_CP084440 Location: 2592605..2637936 Organism: Staphylococcus lugdunensis strain RMLUG4 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LE164_RS12290 (LE164_12305) | 2588019..2589020 | - | 1002 | WP_002478915.1 | NADP-dependent oxidoreductase | - |
| LE164_RS12295 (LE164_12310) | 2589115..2589972 | - | 858 | WP_002460003.1 | alpha/beta hydrolase | - |
| LE164_RS12300 (LE164_12315) | 2590196..2591608 | - | 1413 | WP_104013903.1 | 6-phospho-beta-galactosidase | - |
| LE164_RS12305 (LE164_12320) | 2591624..2592496 | - | 873 | Protein_2376 | PTS lactose transporter subunit IIBC | - |
| LE164_RS12310 (LE164_12325) | 2592605..2593165 | - | 561 | WP_267262613.1 | PBECR4 domain-containing protein | - |
| LE164_RS12315 (LE164_12330) | 2593646..2595112 | - | 1467 | WP_267262614.1 | SH3 domain-containing protein | - |
| LE164_RS12320 (LE164_12335) | 2595115..2595564 | - | 450 | WP_267262615.1 | phage holin | - |
| LE164_RS12325 (LE164_12340) | 2595621..2598185 | - | 2565 | WP_267262616.1 | BppU family phage baseplate upper protein | - |
| LE164_RS12330 (LE164_12345) | 2598333..2598629 | - | 297 | WP_267262617.1 | DUF2951 family protein | - |
| LE164_RS12335 (LE164_12350) | 2598662..2598808 | - | 147 | WP_012990965.1 | hypothetical protein | - |
| LE164_RS12340 (LE164_12355) | 2598805..2600988 | - | 2184 | WP_267262618.1 | hypothetical protein | - |
| LE164_RS12345 (LE164_12360) | 2601007..2602104 | - | 1098 | WP_085317554.1 | hypothetical protein | - |
| LE164_RS12350 (LE164_12365) | 2602121..2603074 | - | 954 | WP_070817159.1 | phage tail family protein | - |
| LE164_RS12355 (LE164_12370) | 2603095..2606757 | - | 3663 | WP_267262619.1 | hypothetical protein | - |
| LE164_RS12360 (LE164_12375) | 2606764..2607129 | - | 366 | WP_070557755.1 | hypothetical protein | - |
| LE164_RS12365 (LE164_12380) | 2607174..2607539 | - | 366 | WP_070481516.1 | tail assembly chaperone | - |
| LE164_RS12370 (LE164_12385) | 2607614..2608177 | - | 564 | WP_070557756.1 | phage major tail protein, TP901-1 family | - |
| LE164_RS12375 (LE164_12390) | 2608195..2608581 | - | 387 | WP_070817162.1 | hypothetical protein | - |
| LE164_RS12380 (LE164_12395) | 2608592..2608933 | - | 342 | WP_267262620.1 | HK97 gp10 family phage protein | - |
| LE164_RS12385 (LE164_12400) | 2608933..2609208 | - | 276 | WP_083321418.1 | hypothetical protein | - |
| LE164_RS12390 (LE164_12405) | 2609232..2609561 | - | 330 | WP_070481521.1 | phage head-tail connector protein | - |
| LE164_RS12395 (LE164_12410) | 2609571..2609810 | - | 240 | WP_228865381.1 | hypothetical protein | - |
| LE164_RS12400 (LE164_12415) | 2609825..2610730 | - | 906 | WP_070557759.1 | capsid protein | - |
| LE164_RS12405 (LE164_12420) | 2610750..2611340 | - | 591 | WP_070817165.1 | DUF4355 domain-containing protein | - |
| LE164_RS12410 (LE164_12425) | 2611325..2611433 | - | 109 | Protein_2397 | hypothetical protein | - |
| LE164_RS12415 | 2611443..2611577 | - | 135 | WP_267262621.1 | hypothetical protein | - |
| LE164_RS12420 (LE164_12430) | 2611659..2612624 | - | 966 | WP_267262622.1 | minor capsid protein | - |
| LE164_RS12425 (LE164_12435) | 2612611..2614062 | - | 1452 | WP_267262623.1 | phage portal protein | - |
| LE164_RS12430 (LE164_12440) | 2614074..2615348 | - | 1275 | WP_267262624.1 | PBSX family phage terminase large subunit | - |
| LE164_RS12435 (LE164_12445) | 2615335..2615766 | - | 432 | WP_070817169.1 | HNH endonuclease | - |
| LE164_RS12440 (LE164_12450) | 2616004..2616420 | - | 417 | WP_012990986.1 | hypothetical protein | - |
| LE164_RS12445 (LE164_12455) | 2616417..2616566 | - | 150 | WP_267262625.1 | hypothetical protein | - |
| LE164_RS12450 (LE164_12460) | 2616563..2616745 | - | 183 | WP_085317566.1 | regulator | - |
| LE164_RS12455 (LE164_12465) | 2616742..2617056 | - | 315 | WP_267262626.1 | hypothetical protein | - |
| LE164_RS12460 (LE164_12470) | 2617106..2617531 | - | 426 | WP_267262627.1 | dUTP diphosphatase | - |
| LE164_RS12465 (LE164_12475) | 2617550..2617801 | - | 252 | WP_070817171.1 | hypothetical protein | - |
| LE164_RS12470 (LE164_12480) | 2617809..2618036 | - | 228 | WP_267262628.1 | DUF1024 family protein | - |
| LE164_RS12475 (LE164_12485) | 2618036..2618461 | - | 426 | WP_267262629.1 | DUF3310 domain-containing protein | - |
| LE164_RS12480 (LE164_12490) | 2618467..2618718 | - | 252 | WP_267262630.1 | hypothetical protein | - |
| LE164_RS12485 (LE164_12495) | 2618721..2619035 | - | 315 | WP_070481536.1 | hypothetical protein | - |
| LE164_RS12490 (LE164_12500) | 2619032..2619439 | - | 408 | WP_267262631.1 | RusA family crossover junction endodeoxyribonuclease | - |
| LE164_RS12495 (LE164_12505) | 2619430..2619864 | - | 435 | WP_267262632.1 | DNA N-6-adenine-methyltransferase | - |
| LE164_RS12500 (LE164_12510) | 2619874..2620119 | - | 246 | WP_099816453.1 | hypothetical protein | - |
| LE164_RS12505 (LE164_12515) | 2620271..2621032 | - | 762 | WP_267262738.1 | IS21 family transposase ISRme9 | Transposase |
| LE164_RS12510 (LE164_12520) | 2621054..2621839 | - | 786 | WP_267262739.1 | conserved phage C-terminal domain-containing protein | - |
| LE164_RS12515 (LE164_12525) | 2621832..2622617 | - | 786 | WP_267262633.1 | AP2 domain-containing protein | - |
| LE164_RS12520 (LE164_12530) | 2622623..2622853 | - | 231 | WP_267262634.1 | helix-turn-helix transcriptional regulator | - |
| LE164_RS12525 (LE164_12535) | 2622822..2623517 | - | 696 | WP_267262635.1 | putative HNHc nuclease | - |
| LE164_RS12530 (LE164_12540) | 2623530..2624084 | - | 555 | WP_267262636.1 | single-stranded DNA-binding protein | - |
| LE164_RS12535 (LE164_12545) | 2624113..2624901 | - | 789 | WP_267262637.1 | ATP-binding protein | - |
| LE164_RS12540 (LE164_12550) | 2624894..2625118 | - | 225 | WP_267262638.1 | DUF2483 family protein | - |
| LE164_RS12545 (LE164_12555) | 2625090..2625365 | - | 276 | WP_267262639.1 | hypothetical protein | - |
| LE164_RS12550 (LE164_12560) | 2625429..2625608 | - | 180 | WP_267262640.1 | hypothetical protein | - |
| LE164_RS12555 (LE164_12565) | 2625836..2626219 | + | 384 | WP_002478859.1 | hypothetical protein | - |
| LE164_RS12560 (LE164_12570) | 2626167..2626478 | - | 312 | WP_070866275.1 | hypothetical protein | - |
| LE164_RS12565 (LE164_12575) | 2626516..2626743 | - | 228 | WP_237622948.1 | hypothetical protein | - |
| LE164_RS12570 (LE164_12580) | 2626755..2627342 | - | 588 | WP_107638322.1 | hypothetical protein | - |
| LE164_RS12575 (LE164_12585) | 2627345..2628232 | - | 888 | WP_267262641.1 | DUF3102 domain-containing protein | - |
| LE164_RS12580 (LE164_12590) | 2628288..2628497 | + | 210 | WP_000033736.1 | hypothetical protein | - |
| LE164_RS12585 (LE164_12595) | 2628486..2628656 | - | 171 | WP_176746548.1 | hypothetical protein | - |
| LE164_RS12590 (LE164_12600) | 2628672..2628920 | - | 249 | WP_070817182.1 | helix-turn-helix transcriptional regulator | - |
| LE164_RS12595 (LE164_12605) | 2629085..2629408 | + | 324 | WP_070817183.1 | helix-turn-helix transcriptional regulator | Antitoxin Detail |
| LE164_RS12600 (LE164_12610) | 2629420..2629884 | + | 465 | WP_267262642.1 | ImmA/IrrE family metallo-endopeptidase | Toxin Detail |
| LE164_RS12605 (LE164_12615) | 2629936..2630442 | + | 507 | WP_070481548.1 | hypothetical protein | - |
| LE164_RS12610 (LE164_12620) | 2630508..2631890 | + | 1383 | WP_267262643.1 | Tn3 family transposase ISPsy42 | Transposase |
| LE164_RS12615 (LE164_12625) | 2631912..2632790 | - | 879 | Protein_2438 | PTS transporter subunit EIIC | - |
| LE164_RS12620 (LE164_12630) | 2632799..2633110 | - | 312 | WP_002460006.1 | PTS lactose transporter subunit IIA | - |
| LE164_RS12625 (LE164_12635) | 2633130..2634104 | - | 975 | WP_002460008.1 | tagatose-bisphosphate aldolase | - |
| LE164_RS12630 (LE164_12640) | 2634108..2635043 | - | 936 | WP_002478851.1 | tagatose-6-phosphate kinase | - |
| LE164_RS12635 (LE164_12645) | 2635056..2635571 | - | 516 | WP_002460010.1 | galactose-6-phosphate isomerase subunit LacB | - |
| LE164_RS12640 (LE164_12650) | 2635587..2636015 | - | 429 | WP_002478850.1 | galactose-6-phosphate isomerase subunit LacA | - |
| LE164_RS12645 (LE164_12655) | 2636246..2637001 | - | 756 | WP_002460013.1 | DeoR/GlpR family DNA-binding transcription regulator | - |
| LE164_RS12650 (LE164_12660) | 2637199..2637936 | + | 738 | WP_172452322.1 | NAD-dependent protein deacylase | - |
| LE164_RS12655 (LE164_12665) | 2638234..2638893 | - | 660 | WP_002478848.1 | antibiotic biosynthesis monooxygenase | - |
| LE164_RS12660 (LE164_12670) | 2640146..2640817 | - | 672 | WP_070817119.1 | 4'-phosphopantetheinyl transferase superfamily protein | - |
| LE164_RS12665 (LE164_12675) | 2640825..2642564 | - | 1740 | WP_002478846.1 | lugdunin non-ribosomal peptide synthetase LugD | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|