MGE detailed information
MGE type: Prophage MGE length: 24987 bp
Accession: NZ_CP084437 Location: 494884..519870 Organism: Staphylococcus lugdunensis strain RMLUG3 Replicon: chromosome
Accession: NZ_CP084437 Location: 494884..519870 Organism: Staphylococcus lugdunensis strain RMLUG3 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LE166_RS02400 (LE166_02400) | 490585..491301 | - | 717 | WP_002461418.1 | LytTR family DNA-binding domain-containing protein | - |
| LE166_RS02405 (LE166_02405) | 491314..492603 | - | 1290 | WP_002461417.1 | GHKL domain-containing protein | - |
| LE166_RS02410 (LE166_02410) | 492624..492767 | - | 144 | WP_002461416.1 | cyclic lactone autoinducer peptide | - |
| LE166_RS02415 (LE166_02415) | 492770..493336 | - | 567 | WP_037540641.1 | accessory gene regulator AgrB | - |
| LE166_RS02420 (LE166_02420) | 493964..494749 | - | 786 | WP_002492308.1 | carbon-nitrogen family hydrolase | - |
| LE166_RS02425 (LE166_02425) | 494884..495507 | - | 624 | WP_002461413.1 | nitroreductase family protein | - |
| LE166_RS02430 (LE166_02430) | 495701..497209 | + | 1509 | WP_062248909.1 | SdrH family protein | - |
| LE166_RS02435 (LE166_02435) | 497628..498368 | - | 741 | WP_002461411.1 | CPBP family intramembrane metalloprotease | - |
| LE166_RS02440 (LE166_02440) | 498549..498833 | + | 285 | WP_002461410.1 | co-chaperone GroES | - |
| LE166_RS02445 (LE166_02445) | 498893..500515 | + | 1623 | WP_267262507.1 | 60 kDa chaperonin | VF |
| LE166_RS02450 (LE166_02450) | 500584..501756 | - | 1173 | WP_002492309.1 | Transposase from transposon Tn916 ; Integrase | Integrase |
| LE166_RS02455 (LE166_02455) | 501770..502444 | - | 675 | WP_002445345.1 | helix-turn-helix transcriptional regulator | - |
| LE166_RS02460 (LE166_02460) | 502617..502835 | + | 219 | WP_000153640.1 | helix-turn-helix transcriptional regulator | - |
| LE166_RS02465 (LE166_02465) | 502840..503157 | + | 318 | WP_002445364.1 | helix-turn-helix domain-containing protein | - |
| LE166_RS02470 (LE166_02470) | 503154..503300 | + | 147 | WP_002445365.1 | hypothetical protein | - |
| LE166_RS02475 (LE166_02475) | 503293..503502 | + | 210 | WP_001058489.1 | hypothetical protein | Antitoxin Detail |
| LE166_RS02480 (LE166_02480) | 503505..503828 | + | 324 | WP_002445368.1 | DUF1474 family protein | Toxin Detail |
| LE166_RS02485 (LE166_02485) | 503892..504761 | + | 870 | WP_002445370.1 | primase alpha helix C-terminal domain-containing protein | - |
| LE166_RS02490 (LE166_02490) | 504775..506484 | + | 1710 | WP_002445371.1 | DUF927 domain-containing protein | - |
| LE166_RS02495 (LE166_02495) | 506832..507197 | + | 366 | WP_002445372.1 | hypothetical protein | - |
| LE166_RS02500 (LE166_02500) | 507211..507852 | + | 642 | WP_002492310.1 | pathogenicity island protein | - |
| LE166_RS02505 (LE166_02505) | 508140..508484 | + | 345 | WP_002445374.1 | hypothetical protein | - |
| LE166_RS02510 (LE166_02510) | 508498..508731 | + | 234 | WP_002492317.1 | hypothetical protein | - |
| LE166_RS02515 (LE166_02515) | 508743..509264 | + | 522 | WP_002445376.1 | hypothetical protein | - |
| LE166_RS02520 (LE166_02520) | 509327..509899 | + | 573 | WP_002445377.1 | terminase small subunit | - |
| LE166_RS02525 (LE166_02525) | 510179..510688 | + | 510 | WP_002492698.1 | DUF4065 domain-containing protein | - |
| LE166_RS02530 (LE166_02530) | 510681..511289 | + | 609 | WP_002445379.1 | hypothetical protein | - |
| LE166_RS02535 (LE166_02535) | 511494..511721 | + | 228 | WP_002445380.1 | hypothetical protein | - |
| LE166_RS02540 (LE166_02540) | 511793..511909 | + | 117 | Protein_493 | hypothetical protein | - |
| LE166_RS02545 (LE166_02545) | 512164..513078 | + | 915 | WP_002445383.1 | iron-hydroxamate ABC transporter substrate-binding protein | - |
| LE166_RS02550 (LE166_02550) | 513136..513966 | + | 831 | WP_002445384.1 | class I SAM-dependent methyltransferase | - |
| LE166_RS02555 (LE166_02555) | 514887..516173 | - | 1287 | WP_002492717.1 | aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme | - |
| LE166_RS02560 (LE166_02560) | 516647..516826 | + | 180 | WP_002461405.1 | hypothetical protein | - |
| LE166_RS02565 (LE166_02565) | 517052..517432 | + | 381 | WP_002492708.1 | GntR family transcriptional regulator | - |
| LE166_RS02570 (LE166_02570) | 517429..518316 | + | 888 | WP_002492705.1 | ABC transporter ATP-binding protein NatA | VF |
| LE166_RS02575 (LE166_02575) | 518313..518978 | + | 666 | WP_002492693.1 | ABC-2 transporter permease | - |
| LE166_RS02580 (LE166_02580) | 518998..519870 | + | 873 | WP_002461399.1 | ABC transporter ATP-binding protein | - |
| LE166_RS02585 (LE166_02585) | 519870..520598 | + | 729 | WP_002461398.1 | ABC transporter permease | - |
| LE166_RS02590 (LE166_02590) | 520692..521249 | - | 558 | WP_002492740.1 | thioredoxin family protein | - |
| LE166_RS02595 (LE166_02595) | 521378..521902 | + | 525 | WP_002477930.1 | hypothetical protein | - |
| LE166_RS02600 (LE166_02600) | 521972..522526 | + | 555 | WP_002461394.1 | DUF1700 domain-containing protein | - |
| LE166_RS02605 (LE166_02605) | 522526..523365 | + | 840 | WP_002461393.1 | DUF4097 family beta strand repeat-containing protein | - |
| LE166_RS02610 (LE166_02610) | 523750..524790 | - | 1041 | WP_002477931.1 | C45 family autoproteolytic acyltransferase/hydolase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|