MGE detailed information
MGE type: Conjugative plasmid MGE length: 145051 bp
Accession: NZ_CP084417 Location: 1..145051 Organism: Klebsiella michiganensis strain YL6-1 Replicon: plasmid p2
Accession: NZ_CP084417 Location: 1..145051 Organism: Klebsiella michiganensis strain YL6-1 Replicon: plasmid p2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LDP80_RS29710 (LDP80_29750) | 623..1612 | + | 990 | WP_001282585.1 | phage recombination protein Bet | - |
| LDP80_RS29715 (LDP80_29755) | 1675..2685 | + | 1011 | WP_000706865.1 | YqaJ viral recombinase family protein | - |
| LDP80_RS29720 (LDP80_29760) | 2885..4162 | + | 1278 | WP_000170086.1 | DUF3150 domain-containing protein | - |
| LDP80_RS29725 (LDP80_29765) | 4247..6043 | + | 1797 | WP_000039318.1 | VWA domain-containing protein | - |
| LDP80_RS29730 (LDP80_29770) | 6105..6440 | + | 336 | WP_001071288.1 | hypothetical protein | - |
| LDP80_RS29735 (LDP80_29775) | 6705..7244 | + | 540 | WP_000018872.1 | hypothetical protein | - |
| LDP80_RS29740 (LDP80_29780) | 7335..7835 | + | 501 | WP_000793769.1 | hypothetical protein | - |
| LDP80_RS29745 (LDP80_29785) | 7909..8793 | + | 885 | WP_000477209.1 | hypothetical protein | - |
| LDP80_RS29750 (LDP80_29790) | 8859..9083 | + | 225 | WP_001102700.1 | class I ribonucleotide reductase maintenance protein YfaE | - |
| LDP80_RS29755 (LDP80_29795) | 9145..9534 | + | 390 | WP_000026577.1 | hypothetical protein | - |
| LDP80_RS29760 (LDP80_29800) | 9524..9976 | + | 453 | WP_001176699.1 | hypothetical protein | - |
| LDP80_RS29765 (LDP80_29805) | 10314..10505 | + | 192 | WP_000651508.1 | hypothetical protein | - |
| LDP80_RS29770 (LDP80_29810) | 10574..10927 | + | 354 | WP_000994741.1 | hypothetical protein | - |
| LDP80_RS29775 (LDP80_29815) | 11119..11463 | + | 345 | WP_000209093.1 | hypothetical protein | - |
| LDP80_RS29780 (LDP80_29820) | 11541..11843 | + | 303 | WP_000410925.1 | hypothetical protein | - |
| LDP80_RS29785 (LDP80_29825) | 11921..13546 | + | 1626 | WP_000201432.1 | DNA cytosine methyltransferase | - |
| LDP80_RS29790 (LDP80_29830) | 13607..14038 | + | 432 | WP_000687894.1 | hypothetical protein | - |
| LDP80_RS29795 (LDP80_29835) | 14112..14666 | + | 555 | WP_001093868.1 | hypothetical protein | - |
| LDP80_RS29800 (LDP80_29840) | 14899..15285 | + | 387 | WP_000042274.1 | hypothetical protein | - |
| LDP80_RS29805 (LDP80_29845) | 15373..17826 | + | 2454 | WP_001187970.1 | phosphoadenosine phosphosulfate reductase | - |
| LDP80_RS29810 (LDP80_29850) | 18028..18231 | + | 204 | WP_000050848.1 | hypothetical protein | - |
| LDP80_RS29815 (LDP80_29855) | 18303..18908 | + | 606 | WP_000071870.1 | 5'-deoxynucleotidase | - |
| LDP80_RS29820 (LDP80_29860) | 18901..19170 | + | 270 | WP_000184110.1 | hypothetical protein | - |
| LDP80_RS29825 (LDP80_29865) | 19184..19402 | + | 219 | WP_000260293.1 | hypothetical protein | - |
| LDP80_RS29830 (LDP80_29870) | 19476..20033 | + | 558 | WP_000064431.1 | pyruvate dehydrogenase | - |
| LDP80_RS29835 (LDP80_29875) | 20108..20959 | + | 852 | WP_000595210.1 | hypothetical protein | - |
| LDP80_RS29840 (LDP80_29880) | 21417..21803 | + | 387 | WP_001077335.1 | hypothetical protein | - |
| LDP80_RS29845 (LDP80_29885) | 21981..23708 | + | 1728 | WP_000122923.1 | toprim domain-containing protein | - |
| LDP80_RS29850 (LDP80_29890) | 23695..23973 | + | 279 | WP_000268337.1 | hypothetical protein | - |
| LDP80_RS29855 (LDP80_29895) | 24046..24285 | + | 240 | WP_000714162.1 | permease | - |
| LDP80_RS29860 (LDP80_29900) | 24295..24411 | + | 117 | WP_000338626.1 | hypothetical protein | - |
| LDP80_RS29865 (LDP80_29905) | 24532..24957 | + | 426 | WP_238971908.1 | hypothetical protein | - |
| LDP80_RS29870 (LDP80_29910) | 24900..25658 | - | 759 | WP_238971909.1 | IS5 family transposase ISSod6 | Transposase |
| LDP80_RS29875 (LDP80_29915) | 25906..26631 | + | 726 | WP_000988732.1 | hypothetical protein | - |
| LDP80_RS29880 (LDP80_29920) | 26872..31026 | + | 4155 | WP_014342219.1 | hypothetical protein | VF |
| LDP80_RS29885 (LDP80_29925) | 31023..31295 | + | 273 | WP_000787563.1 | MafI family immunity protein | - |
| LDP80_RS29890 (LDP80_29930) | 31590..31889 | + | 300 | WP_011872911.1 | hypothetical protein | - |
| LDP80_RS29895 (LDP80_29935) | 32056..32508 | + | 453 | WP_000791469.1 | hypothetical protein | - |
| LDP80_RS29900 (LDP80_29940) | 32524..33126 | - | 603 | WP_000278322.1 | hypothetical protein | - |
| LDP80_RS29905 (LDP80_29945) | 33388..33669 | + | 282 | WP_000575657.1 | hypothetical protein | - |
| LDP80_RS29910 (LDP80_29950) | 33968..34504 | + | 537 | WP_000949433.1 | hypothetical protein | - |
| LDP80_RS29915 (LDP80_29955) | 34507..35517 | + | 1011 | WP_000543934.1 | IS91 family transposase ISWz1 | Transposase |
| LDP80_RS29920 (LDP80_29960) | 35522..36391 | + | 870 | WP_000997323.1 | 3'-5' exonuclease | - |
| LDP80_RS29925 (LDP80_29965) | 36388..36798 | + | 411 | WP_238971910.1 | hypothetical protein | - |
| LDP80_RS29930 (LDP80_29970) | 37111..37986 | + | 876 | WP_001097010.1 | DNA replication terminus site-binding protein | - |
| LDP80_RS29935 (LDP80_29975) | 38079..38684 | - | 606 | WP_000509966.1 | Tn3 family transposase TnpR_Tn5403 | Transposase |
| LDP80_RS29940 (LDP80_29980) | 38779..41676 | + | 2898 | WP_001553819.1 | Tn3 family transposase TnpA_Tn5403 | Transposase |
| LDP80_RS29945 (LDP80_29985) | 41826..42866 | + | 1041 | WP_000101568.1 | DNA-binding protein | - |
| LDP80_RS29950 (LDP80_29990) | 43153..43527 | + | 375 | Protein_49 | DNA helicase | - |
| LDP80_RS29955 (LDP80_29995) | 43734..44636 | - | 903 | Protein_50 | hypothetical protein | VF |
| LDP80_RS29960 (LDP80_30000) | 44690..45394 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| LDP80_RS29965 (LDP80_30005) | 45457..45921 | + | 465 | Protein_52 | IS6-like element IS6100 family transposase | - |
| LDP80_RS29970 (LDP80_30010) | 46012..46911 | - | 900 | WP_020956917.1 | hypothetical protein | ARG |
| LDP80_RS29975 (LDP80_30015) | 47022..47633 | - | 612 | WP_238971911.1 | IS91 family transposase ISWz1 | Transposase |
| LDP80_RS29980 (LDP80_30020) | 47881..49008 | + | 1128 | WP_099531397.1 | ISAs1 family transposase ISVsa13 | Transposase |
| LDP80_RS29985 (LDP80_30025) | 49330..49677 | + | 348 | WP_000679427.1 | Spermidine export protein MdtJ | ARG |
| LDP80_RS29990 (LDP80_30030) | 49671..50510 | + | 840 | WP_000259031.1 | hypothetical protein | ARG |
| LDP80_RS29995 (LDP80_30035) | 50915..52456 | + | 1542 | WP_000050481.1 | IS91 family transposase ISVsa3 | Transposase |
| LDP80_RS30000 (LDP80_30040) | 52634..53512 | - | 879 | WP_238971912.1 | hypothetical protein | - |
| LDP80_RS30005 (LDP80_30045) | 53557..53751 | - | 195 | WP_000757530.1 | DUF2997 domain-containing protein | - |
| LDP80_RS30010 (LDP80_30050) | 53800..54192 | - | 393 | WP_000018404.1 | hypothetical protein | - |
| LDP80_RS30015 (LDP80_30055) | 54197..54526 | - | 330 | WP_000277953.1 | hypothetical protein | - |
| LDP80_RS30020 (LDP80_30060) | 54682..56145 | - | 1464 | WP_001280522.1 | AAA family ATPase | - |
| LDP80_RS30025 (LDP80_30065) | 56219..57151 | - | 933 | WP_000434071.1 | hypothetical protein | - |
| LDP80_RS30030 (LDP80_30070) | 57713..58210 | - | 498 | WP_000062185.1 | hypothetical protein | - |
| LDP80_RS30035 (LDP80_30075) | 58213..58701 | - | 489 | WP_001273096.1 | DUF1643 domain-containing protein | - |
| LDP80_RS30040 (LDP80_30080) | 58798..59133 | + | 336 | WP_000683476.1 | hypothetical protein | - |
| LDP80_RS30045 (LDP80_30085) | 59148..59618 | - | 471 | WP_001281821.1 | hypothetical protein | - |
| LDP80_RS30050 (LDP80_30090) | 59611..59982 | - | 372 | WP_000516916.1 | hypothetical protein | - |
| LDP80_RS30055 (LDP80_30095) | 59993..60187 | - | 195 | WP_000343597.1 | hypothetical protein | - |
| LDP80_RS30060 (LDP80_30100) | 60528..61076 | - | 549 | WP_001061574.1 | transcriptional regulator | - |
| LDP80_RS30065 (LDP80_30105) | 61239..61589 | + | 351 | WP_000270043.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| LDP80_RS30070 (LDP80_30110) | 61594..61896 | + | 303 | WP_000124640.1 | XRE family transcriptional regulator | Antitoxin Detail |
| LDP80_RS30075 (LDP80_30115) | 61923..62216 | - | 294 | WP_001239997.1 | chromosome segregation protein ParM | - |
| LDP80_RS30080 (LDP80_30120) | 62304..62576 | - | 273 | WP_001043047.1 | HU family DNA-binding protein | - |
| LDP80_RS30085 (LDP80_30125) | 62634..63161 | - | 528 | WP_001236377.1 | thermonuclease family protein | - |
| LDP80_RS30090 (LDP80_30130) | 63392..64249 | - | 858 | WP_001167032.1 | hypothetical protein | - |
| LDP80_RS30095 (LDP80_30135) | 64236..64466 | - | 231 | WP_000972663.1 | hypothetical protein | - |
| LDP80_RS30100 (LDP80_30140) | 64466..64984 | - | 519 | WP_000210756.1 | nitrite reductase | - |
| LDP80_RS30105 (LDP80_30145) | 64981..65427 | - | 447 | WP_000919345.1 | Fe3+-siderophore ABC transporter permease | - |
| LDP80_RS30110 (LDP80_30150) | 65427..65786 | - | 360 | WP_000422768.1 | hypothetical protein | - |
| LDP80_RS30115 (LDP80_30155) | 65843..66271 | - | 429 | WP_000591074.1 | hypothetical protein | - |
| LDP80_RS30120 (LDP80_30160) | 66305..67165 | - | 861 | WP_000139698.1 | DsbA family protein | - |
| LDP80_RS30125 (LDP80_30165) | 67181..68140 | - | 960 | WP_000829616.1 | S49 family peptidase | - |
| LDP80_RS30130 (LDP80_30170) | 68140..68994 | - | 855 | WP_000539392.1 | hypothetical protein | - |
| LDP80_RS30135 (LDP80_30175) | 68999..69292 | - | 294 | WP_001370730.1 | hypothetical protein | - |
| LDP80_RS30140 (LDP80_30180) | 69303..69776 | - | 474 | WP_000057877.1 | hypothetical protein | - |
| LDP80_RS30145 (LDP80_30185) | 69873..70394 | - | 522 | WP_000805800.1 | hypothetical protein | - |
| LDP80_RS30150 (LDP80_30190) | 70397..70918 | - | 522 | WP_000393785.1 | hypothetical protein | - |
| LDP80_RS30155 (LDP80_30195) | 70923..71531 | - | 609 | WP_000849071.1 | hypothetical protein | - |
| LDP80_RS30160 (LDP80_30200) | 71800..72915 | + | 1116 | WP_000946102.1 | phosphoadenosine phosphosulfate reductase family protein | - |
| LDP80_RS30165 (LDP80_30205) | 72933..73367 | + | 435 | WP_000883925.1 | hypothetical protein | - |
| LDP80_RS30170 (LDP80_30210) | 74404..75504 | - | 1101 | WP_000350011.1 | RepB family plasmid replication initiator protein | - |
| LDP80_RS30175 (LDP80_30215) | 75489..75776 | - | 288 | WP_000127321.1 | hypothetical protein | - |
| LDP80_RS30180 (LDP80_30220) | 75781..76320 | - | 540 | WP_001447712.1 | conjugative transfer protein MobI(A/C) | - |
| LDP80_RS30185 (LDP80_30225) | 76819..77802 | + | 984 | WP_000077458.1 | ParM/StbA family protein | - |
| LDP80_RS30190 (LDP80_30230) | 77819..78112 | + | 294 | WP_000919078.1 | hypothetical protein | - |
| LDP80_RS30195 (LDP80_30235) | 78114..78533 | + | 420 | WP_000651490.1 | H-NS family nucleoid-associated regulatory protein | - |
| LDP80_RS30200 (LDP80_30240) | 78593..79144 | - | 552 | WP_001020646.1 | FlhC family transcriptional regulator | - |
| LDP80_RS30205 (LDP80_30245) | 79141..79749 | - | 609 | WP_000891157.1 | hypothetical protein | - |
| LDP80_RS30210 (LDP80_30250) | 79760..80293 | - | 534 | WP_000790610.1 | transglycosylase SLT domain-containing protein | - |
| LDP80_RS30215 (LDP80_30255) | 80293..80565 | - | 273 | WP_000356489.1 | helix-turn-helix domain-containing protein | - |
| LDP80_RS30220 (LDP80_30260) | 81281..81643 | + | 363 | WP_000683483.1 | hypothetical protein | - |
| LDP80_RS30225 (LDP80_30265) | 81681..85295 | - | 3615 | WP_000534551.1 | conjugal transfer protein TraG N-terminal domain-containing protein | - |
| LDP80_RS30230 (LDP80_30270) | 85308..86741 | - | 1434 | WP_000256129.1 | conjugal transfer protein TraH | - |
| LDP80_RS30235 (LDP80_30275) | 86743..87783 | - | 1041 | WP_001326396.1 | conjugal transfer protein TraF | - |
| LDP80_RS30240 (LDP80_30280) | 87894..89045 | - | 1152 | Protein_107 | UvrD-helicase domain-containing protein | - |
| LDP80_RS30245 (LDP80_30285) | 89323..90327 | - | 1005 | WP_000427623.1 | IS110 family transposase IS4321R | Transposase |
| LDP80_RS30250 (LDP80_30290) | 90406..93378 | - | 2973 | WP_001138073.1 | Tn3 family transposase TnpA_TnAs3 | Transposase |
| LDP80_RS30255 (LDP80_30295) | 93381..93938 | - | 558 | WP_001162012.1 | Tn3 family transposase TnpR_TnAs2 | Transposase |
| LDP80_RS30260 (LDP80_30300) | 94235..94456 | - | 222 | Protein_111 | tyrosine-type recombinase/integrase | - |
| LDP80_RS30265 (LDP80_30305) | 94522..95226 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| LDP80_RS30270 (LDP80_30310) | 95279..95800 | - | 522 | Protein_113 | aminoglycoside phosphotransferase family protein | - |
| LDP80_RS30275 (LDP80_30315) | 95800..96603 | - | 804 | WP_001082319.1 | hypothetical protein | ARG |
| LDP80_RS30280 (LDP80_30320) | 96664..97479 | - | 816 | WP_001043260.1 | hypothetical protein | ARG |
| LDP80_RS30285 (LDP80_30325) | 97786..98097 | + | 312 | WP_000338945.1 | hypothetical protein | - |
| LDP80_RS30290 (LDP80_30330) | 98271..99056 | + | 786 | WP_001151304.1 | Iron-sulfur cluster carrier protein | VF |
| LDP80_RS30295 (LDP80_30335) | 99060..100241 | + | 1182 | WP_001207227.1 | KorB domain-containing protein | - |
| LDP80_RS30300 (LDP80_30340) | 100290..100562 | + | 273 | WP_000703827.1 | helix-turn-helix domain-containing protein | - |
| LDP80_RS30305 (LDP80_30345) | 100615..101250 | - | 636 | WP_238971907.1 | N-6 DNA methylase | - |
| LDP80_RS30310 (LDP80_30350) | 101342..101485 | - | 144 | WP_000939033.1 | hypothetical protein | - |
| LDP80_RS30315 (LDP80_30355) | 101804..102181 | + | 378 | WP_001125905.1 | hypothetical protein | - |
| LDP80_RS30320 (LDP80_30360) | 102174..102455 | + | 282 | WP_000044824.1 | hypothetical protein | - |
| LDP80_RS30325 (LDP80_30365) | 102430..103104 | + | 675 | WP_000344151.1 | thymidylate kinase | - |
| LDP80_RS30330 (LDP80_30370) | 103097..103603 | + | 507 | WP_000566600.1 | hypothetical protein | - |
| LDP80_RS30335 (LDP80_30375) | 103609..103920 | + | 312 | WP_002210541.1 | hypothetical protein | - |
| LDP80_RS30340 (LDP80_30380) | 103929..104429 | + | 501 | WP_000647189.1 | hypothetical protein | - |
| LDP80_RS30345 (LDP80_30385) | 104433..105860 | + | 1428 | WP_000936896.1 | DNA cytosine methyltransferase | - |
| LDP80_RS30350 (LDP80_30390) | 105860..106516 | + | 657 | WP_000268551.1 | hypothetical protein | - |
| LDP80_RS30355 (LDP80_30395) | 106722..106940 | + | 219 | WP_000362482.1 | hypothetical protein | - |
| LDP80_RS30360 (LDP80_30400) | 107034..107651 | + | 618 | WP_000464631.1 | hypothetical protein | - |
| LDP80_RS30365 (LDP80_30405) | 107884..108162 | + | 279 | WP_014386427.1 | hypothetical protein | - |
| LDP80_RS30370 (LDP80_30410) | 108254..108742 | - | 489 | WP_000468105.1 | hypothetical protein | - |
| LDP80_RS30375 (LDP80_30415) | 108757..110949 | - | 2193 | WP_000366822.1 | DNA topoisomerase 3 | - |
| LDP80_RS30380 (LDP80_30420) | 110949..111182 | - | 234 | WP_001191892.1 | hypothetical protein | - |
| LDP80_RS30385 (LDP80_30425) | 111164..111781 | - | 618 | WP_001249396.1 | hypothetical protein | - |
| LDP80_RS30390 (LDP80_30430) | 111949..114927 | + | 2979 | WP_001337757.1 | hypothetical protein | Relaxase |
| LDP80_RS30395 (LDP80_30435) | 114924..116789 | + | 1866 | WP_000178856.1 | conjugative transfer system coupling protein TraD | - |
| LDP80_RS30400 (LDP80_30440) | 116839..117384 | + | 546 | WP_000228720.1 | hypothetical protein | - |
| LDP80_RS30405 (LDP80_30445) | 117341..117970 | + | 630 | WP_000743450.1 | DUF4400 domain-containing protein | - |
| LDP80_RS30410 (LDP80_30450) | 117980..118426 | + | 447 | WP_000122506.1 | hypothetical protein | - |
| LDP80_RS30415 (LDP80_30455) | 118436..118813 | + | 378 | WP_000869261.1 | hypothetical protein | - |
| LDP80_RS30420 (LDP80_30460) | 118813..119475 | + | 663 | WP_001231463.1 | hypothetical protein | - |
| LDP80_RS30425 (LDP80_30465) | 119811..120176 | + | 366 | WP_001052531.1 | hypothetical protein | - |
| LDP80_RS30430 (LDP80_30470) | 120321..120602 | + | 282 | WP_000805625.1 | type IV conjugative transfer system protein TraL | - |
| LDP80_RS30435 (LDP80_30475) | 120599..121225 | + | 627 | WP_001049716.1 | TraE/TraK family type IV conjugative transfer system protein | - |
| LDP80_RS30440 (LDP80_30480) | 121209..122126 | + | 918 | WP_000794249.1 | type-F conjugative transfer system secretin TraK | - |
| LDP80_RS30445 (LDP80_30485) | 122126..123439 | + | 1314 | WP_024131605.1 | TraB/VirB10 family protein | - |
| LDP80_RS30450 (LDP80_30490) | 123436..124014 | + | 579 | WP_000793435.1 | type IV conjugative transfer system lipoprotein TraV | - |
| LDP80_RS30455 (LDP80_30495) | 124018..124410 | + | 393 | WP_000479535.1 | TraA family conjugative transfer protein | - |
| LDP80_RS30460 (LDP80_30500) | 124611..130142 | + | 5532 | WP_000606833.1 | Ig-like domain-containing protein | - |
| LDP80_RS30465 (LDP80_30505) | 130291..130998 | + | 708 | WP_001259347.1 | DsbC family protein | - |
| LDP80_RS30470 (LDP80_30510) | 130995..133442 | + | 2448 | WP_000637386.1 | type IV secretion system protein TraC | - |
| LDP80_RS30475 (LDP80_30515) | 133457..133774 | + | 318 | WP_000351984.1 | hypothetical protein | - |
| LDP80_RS30480 (LDP80_30520) | 133771..134301 | + | 531 | WP_001010738.1 | S26 family signal peptidase | - |
| LDP80_RS30485 (LDP80_30525) | 134264..135529 | + | 1266 | WP_000621288.1 | TrbC family F-type conjugative pilus assembly protein | - |
| LDP80_RS30490 (LDP80_30530) | 135526..136197 | + | 672 | WP_001337754.1 | EAL domain-containing protein | - |
| LDP80_RS30495 (LDP80_30535) | 136197..137201 | + | 1005 | WP_043940352.1 | TraU family protein | - |
| LDP80_RS30500 (LDP80_30540) | 137317..140115 | + | 2799 | WP_001256487.1 | conjugal transfer mating pair stabilization protein TraN | - |
| LDP80_RS30505 (LDP80_30545) | 140154..141014 | - | 861 | WP_000709517.1 | hypothetical protein | - |
| LDP80_RS30510 (LDP80_30550) | 141137..141778 | - | 642 | WP_000796664.1 | hypothetical protein | - |
| LDP80_RS30515 (LDP80_30555) | 142072..142392 | + | 321 | WP_000547566.1 | hypothetical protein | - |
| LDP80_RS30520 (LDP80_30560) | 142696..142881 | + | 186 | WP_001186917.1 | hypothetical protein | - |
| LDP80_RS30525 (LDP80_30565) | 143101..144069 | + | 969 | WP_000085162.1 | CbbQ/NirQ/NorQ C-terminal domain-containing protein | - |
| LDP80_RS30530 (LDP80_30570) | 144080..144988 | + | 909 | WP_000739139.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|