MGE detailed information
MGE type: Conjugative plasmid MGE length: 101530 bp
Accession: NZ_CP084416 Location: 1..101530 Organism: Klebsiella michiganensis strain YL6-1 Replicon: plasmid p1
Accession: NZ_CP084416 Location: 1..101530 Organism: Klebsiella michiganensis strain YL6-1 Replicon: plasmid p1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LDP80_RS29100 (LDP80_29140) | 1..756 | + | 756 | WP_042078022.1 | replication initiation protein RepE | - |
| LDP80_RS29105 (LDP80_29145) | 1744..2376 | + | 633 | WP_080884176.1 | ParA family protein | - |
| LDP80_RS29110 (LDP80_29150) | 2376..2750 | + | 375 | WP_088903436.1 | hypothetical protein | - |
| LDP80_RS29115 (LDP80_29155) | 2990..3964 | + | 975 | WP_080884175.1 | plasmid segregation protein ParM | - |
| LDP80_RS29120 (LDP80_29160) | 3968..4360 | + | 393 | WP_080884174.1 | plasmid partitioning/stability family protein | - |
| LDP80_RS29125 (LDP80_29165) | 4636..5136 | - | 501 | WP_080884173.1 | PBECR2 nuclease fold domain-containing protein | - |
| LDP80_RS29130 (LDP80_29170) | 5883..6071 | - | 189 | WP_080884172.1 | hypothetical protein | - |
| LDP80_RS29135 (LDP80_29175) | 6154..6441 | - | 288 | WP_032693963.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| LDP80_RS29140 (LDP80_29180) | 6438..6689 | - | 252 | WP_032693964.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| LDP80_RS29145 (LDP80_29185) | 6856..8130 | - | 1275 | WP_080884171.1 | Y-family DNA polymerase | - |
| LDP80_RS29150 (LDP80_29190) | 8130..8555 | - | 426 | WP_032693966.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| LDP80_RS29155 (LDP80_29195) | 8765..8995 | + | 231 | WP_032693967.1 | hypothetical protein | - |
| LDP80_RS29160 (LDP80_29200) | 9430..9663 | + | 234 | Protein_12 | hypothetical protein | - |
| LDP80_RS29165 (LDP80_29205) | 9660..9995 | + | 336 | WP_080884169.1 | hypothetical protein | - |
| LDP80_RS29170 (LDP80_29210) | 10087..10259 | + | 173 | Protein_14 | hypothetical protein | - |
| LDP80_RS29175 (LDP80_29215) | 10379..11080 | + | 702 | WP_080884168.1 | DNA methylase | - |
| LDP80_RS29180 (LDP80_29220) | 11080..11301 | + | 222 | WP_053390281.1 | hypothetical protein | - |
| LDP80_RS29185 (LDP80_29225) | 11348..11758 | + | 411 | WP_032743904.1 | DUF1380 family protein | - |
| LDP80_RS29190 (LDP80_29230) | 11810..12577 | + | 768 | WP_032743901.1 | hypothetical protein | - |
| LDP80_RS29195 (LDP80_29235) | 13016..13444 | + | 429 | WP_048757062.1 | antirestriction protein | - |
| LDP80_RS29200 (LDP80_29240) | 13489..13995 | + | 507 | WP_048757065.1 | antirestriction protein ArdA | - |
| LDP80_RS29205 (LDP80_29245) | 14038..14229 | + | 192 | WP_000761848.1 | hypothetical protein | - |
| LDP80_RS29210 (LDP80_29250) | 14430..14693 | + | 264 | WP_032425679.1 | DNA polymerase III subunit theta | - |
| LDP80_RS29215 (LDP80_29255) | 14718..15038 | + | 321 | WP_049077843.1 | hypothetical protein | - |
| LDP80_RS29220 (LDP80_29260) | 15301..15398 | - | 98 | Protein_24 | hypothetical protein | - |
| LDP80_RS29225 (LDP80_29265) | 15682..16239 | + | 558 | WP_094638182.1 | single-stranded DNA-binding protein | - |
| LDP80_RS29230 (LDP80_29270) | 16288..16536 | + | 249 | WP_053390232.1 | DUF905 domain-containing protein | - |
| LDP80_RS29235 (LDP80_29275) | 16607..18607 | + | 2001 | WP_053390231.1 | ParB/RepB/Spo0J family partition protein | - |
| LDP80_RS29240 (LDP80_29280) | 18648..19082 | + | 435 | WP_087498962.1 | conjugation system SOS inhibitor PsiB | - |
| LDP80_RS29245 (LDP80_29285) | 19079..19807 | + | 729 | WP_080884253.1 | plasmid SOS inhibition protein A | - |
| LDP80_RS29250 (LDP80_29290) | 19804..20127 | + | 324 | WP_053390228.1 | hypothetical protein | - |
| LDP80_RS29255 (LDP80_29295) | 20923..21150 | + | 228 | WP_022644716.1 | hypothetical protein | - |
| LDP80_RS29260 (LDP80_29300) | 21243..21473 | + | 231 | WP_020804025.1 | hypothetical protein | - |
| LDP80_RS29265 (LDP80_29305) | 21522..22397 | + | 876 | WP_022644946.1 | DUF4942 domain-containing protein | - |
| LDP80_RS29270 (LDP80_29310) | 23217..23555 | + | 339 | WP_053390250.1 | hypothetical protein | - |
| LDP80_RS29275 (LDP80_29315) | 23610..23957 | + | 348 | WP_053390249.1 | hypothetical protein | - |
| LDP80_RS29280 (LDP80_29320) | 24048..24278 | + | 231 | WP_032744242.1 | hypothetical protein | - |
| LDP80_RS29285 (LDP80_29325) | 24325..25158 | + | 834 | WP_053390248.1 | N-6 DNA methylase | - |
| LDP80_RS29290 (LDP80_29330) | 25807..26349 | + | 543 | WP_053390246.1 | antirestriction protein | - |
| LDP80_RS29295 (LDP80_29335) | 26372..26794 | - | 423 | WP_077268549.1 | hypothetical protein | VF |
| LDP80_RS29300 (LDP80_29340) | 27298..27690 | + | 393 | WP_020805752.1 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| LDP80_RS29305 (LDP80_29345) | 27928..28629 | + | 702 | WP_223174962.1 | hypothetical protein | - |
| LDP80_RS29310 (LDP80_29350) | 28715..28915 | + | 201 | WP_048289787.1 | TraY domain-containing protein | - |
| LDP80_RS29315 (LDP80_29355) | 28984..29352 | + | 369 | WP_064343525.1 | type IV conjugative transfer system pilin TraA | - |
| LDP80_RS29320 (LDP80_29360) | 29366..29671 | + | 306 | WP_064343526.1 | type IV conjugative transfer system protein TraL | - |
| LDP80_RS29325 (LDP80_29365) | 29687..30253 | + | 567 | WP_064359954.1 | type IV conjugative transfer system protein TraE | - |
| LDP80_RS29330 (LDP80_29370) | 30240..30974 | + | 735 | WP_064343528.1 | type-F conjugative transfer system secretin TraK | - |
| LDP80_RS29335 (LDP80_29375) | 30974..32395 | + | 1422 | WP_053390199.1 | F-type conjugal transfer pilus assembly protein TraB | - |
| LDP80_RS29340 (LDP80_29380) | 32388..32822 | + | 435 | WP_020322358.1 | conjugal transfer protein TraP | - |
| LDP80_RS29345 (LDP80_29385) | 32856..33440 | + | 585 | WP_064343530.1 | type IV conjugative transfer system lipoprotein TraV | - |
| LDP80_RS29350 (LDP80_29390) | 34053..34241 | + | 189 | WP_053390286.1 | hypothetical protein | - |
| LDP80_RS29355 (LDP80_29395) | 34325..34726 | + | 402 | WP_064343532.1 | hypothetical protein | - |
| LDP80_RS29360 (LDP80_29400) | 34723..35022 | + | 300 | WP_053390308.1 | hypothetical protein | - |
| LDP80_RS29365 (LDP80_29405) | 35110..35493 | + | 384 | WP_042946290.1 | hypothetical protein | - |
| LDP80_RS29370 (LDP80_29410) | 35586..38225 | + | 2640 | WP_064343533.1 | type IV secretion system protein TraC | - |
| LDP80_RS29375 (LDP80_29415) | 38225..38617 | + | 393 | WP_064343534.1 | type-F conjugative transfer system protein TrbI | - |
| LDP80_RS29380 (LDP80_29420) | 38614..39240 | + | 627 | WP_064343535.1 | type-F conjugative transfer system protein TraW | - |
| LDP80_RS29385 (LDP80_29425) | 39284..40243 | + | 960 | WP_229295972.1 | conjugal transfer pilus assembly protein TraU | - |
| LDP80_RS29390 (LDP80_29430) | 40256..40903 | + | 648 | WP_064343536.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| LDP80_RS29395 (LDP80_29435) | 40900..41283 | + | 384 | WP_053390297.1 | hypothetical protein | - |
| LDP80_RS29400 (LDP80_29440) | 41280..43235 | + | 1956 | WP_064343537.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| LDP80_RS29405 (LDP80_29445) | 43267..43527 | + | 261 | WP_225025344.1 | hypothetical protein | - |
| LDP80_RS29410 (LDP80_29450) | 43520..44131 | + | 612 | WP_053390217.1 | hypothetical protein | - |
| LDP80_RS29415 (LDP80_29455) | 44121..44363 | + | 243 | WP_053390218.1 | conjugal transfer protein TrbE | - |
| LDP80_RS29420 (LDP80_29460) | 44409..44735 | + | 327 | WP_053390219.1 | hypothetical protein | - |
| LDP80_RS29425 (LDP80_29465) | 44756..45508 | + | 753 | WP_053390220.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| LDP80_RS29430 (LDP80_29470) | 45519..45755 | + | 237 | WP_053390221.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| LDP80_RS29435 (LDP80_29475) | 45730..46290 | + | 561 | WP_039698500.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| LDP80_RS29440 (LDP80_29480) | 46277..47647 | + | 1371 | WP_075606918.1 | conjugal transfer pilus assembly protein TraH | - |
| LDP80_RS29445 (LDP80_29485) | 47647..50526 | + | 2880 | WP_064386194.1 | conjugal transfer mating-pair stabilization protein TraG | - |
| LDP80_RS29450 (LDP80_29490) | 50543..51211 | + | 669 | WP_128317877.1 | hypothetical protein | - |
| LDP80_RS29455 (LDP80_29495) | 51564..52295 | + | 732 | WP_064386198.1 | conjugal transfer complement resistance protein TraT | - |
| LDP80_RS29460 (LDP80_29500) | 52487..53179 | + | 693 | WP_202395549.1 | hypothetical protein | - |
| LDP80_RS29465 (LDP80_29505) | 53298..55616 | + | 2319 | WP_075606915.1 | type IV conjugative transfer system coupling protein TraD | - |
| LDP80_RS29470 (LDP80_29510) | 55616..60874 | + | 5259 | WP_075606914.1 | Multifunctional conjugation protein TraI | Relaxase |
| LDP80_RS29475 (LDP80_29515) | 60957..61682 | + | 726 | WP_064386205.1 | type-F conjugative transfer system pilin acetylase TraX | - |
| LDP80_RS29480 (LDP80_29520) | 61839..62429 | + | 591 | WP_009651737.1 | fertility inhibition protein FinO | - |
| LDP80_RS29485 (LDP80_29525) | 62579..63370 | + | 792 | WP_075606913.1 | DsbA family protein | - |
| LDP80_RS29490 (LDP80_29530) | 63500..64096 | + | 597 | WP_042927543.1 | PIN domain-containing protein | - |
| LDP80_RS29495 (LDP80_29535) | 64166..64810 | + | 645 | WP_042927545.1 | hypothetical protein | - |
| LDP80_RS29500 (LDP80_29540) | 64866..65426 | + | 561 | Protein_80 | DUF2726 domain-containing protein | - |
| LDP80_RS29505 (LDP80_29545) | 65489..66055 | + | 567 | WP_052544827.1 | Phospholipase D | VF |
| LDP80_RS29510 (LDP80_29550) | 66188..66454 | + | 267 | WP_238971906.1 | replication regulatory protein RepA | - |
| LDP80_RS29515 (LDP80_29555) | 66678..66755 | + | 78 | WP_009652807.1 | RepA leader peptide Tap | - |
| LDP80_RS29520 (LDP80_29560) | 66748..67767 | + | 1020 | WP_009652816.1 | plasmid replication initiator RepA | - |
| LDP80_RS29525 (LDP80_29565) | 68782..68943 | + | 162 | Protein_85 | SOS response-associated peptidase | - |
| LDP80_RS29530 (LDP80_29570) | 69066..70457 | - | 1392 | WP_014839878.1 | ISKra4 family transposase ISKpn19 | Transposase |
| LDP80_RS29535 (LDP80_29575) | 70494..71066 | - | 573 | WP_001493762.1 | Tn3 family transposase TnpR_ISPa40 | Transposase |
| LDP80_RS29540 (LDP80_29580) | 71203..71748 | - | 546 | WP_001493763.1 | plasmid pRiA4b ORF-3 family protein | - |
| LDP80_RS29545 (LDP80_29585) | 71927..74935 | - | 3009 | WP_004098837.1 | Tn3 family transposase ISEc63 | Transposase |
| LDP80_RS29550 (LDP80_29590) | 75098..75655 | + | 558 | WP_001217881.1 | Tn3 family transposase TnpR_Tn3 | Transposase |
| LDP80_RS29555 (LDP80_29595) | 75778..76758 | + | 981 | WP_013213985.1 | IS481 family transposase ISKpn27 | Transposase |
| LDP80_RS29560 (LDP80_29600) | 76860..77741 | + | 882 | WP_004199234.1 | Carbapenem-hydrolyzing beta-lactamase KPC | ARG |
| LDP80_RS29565 (LDP80_29605) | 77991..78872 | - | 882 | Protein_93 | IS1182 family transposase ISKpn6 | Transposase |
| LDP80_RS29570 (LDP80_29610) | 78976..79272 | - | 297 | WP_013213987.1 | transcriptional regulator | - |
| LDP80_RS29575 (LDP80_29615) | 79318..79473 | - | 156 | WP_013213988.1 | hypothetical protein | - |
| LDP80_RS29580 (LDP80_29620) | 79601..80026 | - | 426 | WP_013213989.1 | antirestriction protein | - |
| LDP80_RS29585 (LDP80_29625) | 80137..80415 | - | 279 | WP_013213990.1 | hypothetical protein | - |
| LDP80_RS29590 (LDP80_29630) | 80949..81170 | - | 222 | Protein_98 | replication protein | - |
| LDP80_RS29595 (LDP80_29635) | 81400..81945 | + | 546 | WP_001493763.1 | plasmid pRiA4b ORF-3 family protein | - |
| LDP80_RS29600 (LDP80_29640) | 82082..82654 | + | 573 | WP_001493762.1 | Tn3 family transposase TnpR_ISPa40 | Transposase |
| LDP80_RS29605 (LDP80_29645) | 82691..84082 | + | 1392 | WP_014839878.1 | ISKra4 family transposase ISKpn19 | Transposase |
| LDP80_RS29610 (LDP80_29650) | 84228..84686 | - | 459 | WP_040190671.1 | helix-turn-helix domain-containing protein | - |
| LDP80_RS29615 (LDP80_29655) | 84748..84984 | + | 237 | WP_032695943.1 | tautomerase family protein | - |
| LDP80_RS29620 (LDP80_29660) | 85220..85363 | + | 144 | Protein_104 | transposase | - |
| LDP80_RS29625 (LDP80_29665) | 86115..88307 | + | 2193 | WP_032743941.1 | 1,4-alpha-glucan branching enzyme | - |
| LDP80_RS29630 (LDP80_29670) | 88437..89720 | + | 1284 | WP_050074631.1 | glucose-1-phosphate adenylyltransferase | - |
| LDP80_RS29635 (LDP80_29675) | 89810..91243 | + | 1434 | WP_004197677.1 | glycogen synthase GlgA | - |
| LDP80_RS29640 (LDP80_29680) | 91262..93709 | + | 2448 | WP_032690516.1 | glycogen phosphorylase | - |
| LDP80_RS29645 (LDP80_29685) | 93814..95457 | + | 1644 | WP_032743938.1 | phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) | - |
| LDP80_RS29650 (LDP80_29690) | 95604..96173 | + | 570 | WP_032743937.1 | helix-turn-helix transcriptional regulator | - |
| LDP80_RS29655 (LDP80_29695) | 96257..96706 | - | 450 | WP_224250944.1 | MFS transporter | - |
| LDP80_RS29660 (LDP80_29700) | 96858..97061 | - | 204 | WP_049077905.1 | HHA domain-containing protein | - |
| LDP80_RS29665 (LDP80_29705) | 97095..97463 | - | 369 | WP_048293716.1 | hypothetical protein | - |
| LDP80_RS29670 (LDP80_29710) | 97507..98001 | - | 495 | WP_048293717.1 | hypothetical protein | - |
| LDP80_RS29675 (LDP80_29715) | 98032..98607 | - | 576 | WP_020317495.1 | hypothetical protein | - |
| LDP80_RS29680 (LDP80_29720) | 98595..98864 | - | 270 | WP_020804424.1 | hypothetical protein | - |
| LDP80_RS29685 (LDP80_29725) | 99066..99241 | + | 176 | Protein_117 | hypothetical protein | - |
| LDP80_RS29690 (LDP80_29730) | 99434..99751 | + | 318 | WP_164876889.1 | hypothetical protein | - |
| LDP80_RS29695 (LDP80_29735) | 99873..100208 | + | 336 | WP_080884178.1 | hypothetical protein | - |
| LDP80_RS29700 (LDP80_29740) | 100259..100999 | + | 741 | WP_164876890.1 | site-specific integrase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|