MGE detailed information
MGE type: Genomic_island MGE length: 19923 bp
Accession: NZ_CP084406 Location: 968316..988238 Organism: Sphingobium sp. CFD-2 Replicon: chromosome
Accession: NZ_CP084406 Location: 968316..988238 Organism: Sphingobium sp. CFD-2 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LDB29_RS24545 | 963569..964531 | + | 963 | WP_257557345.1 | ThuA domain-containing protein | - |
| LDB29_RS24550 | 964533..965588 | + | 1056 | WP_257557348.1 | RraA family protein | - |
| LDB29_RS24555 | 965642..966076 | + | 435 | WP_044662922.1 | hypothetical protein | - |
| LDB29_RS24560 | 966317..967051 | - | 735 | WP_257557350.1 | zeta toxin family protein | - |
| LDB29_RS24565 | 967048..967368 | - | 321 | WP_037481402.1 | hypothetical protein | - |
| LDB29_RS24570 | 967427..967570 | - | 144 | WP_257557352.1 | hypothetical protein | - |
| LDB29_RS24575 | 967684..968388 | - | 705 | WP_257558026.1 | TonB-dependent receptor | - |
| LDB29_RS24580 | 968316..968717 | - | 402 | WP_257558027.1 | TonB-dependent receptor | - |
| LDB29_RS24585 | 968768..968926 | - | 159 | WP_239659656.1 | DUF736 domain-containing protein | - |
| LDB29_RS24590 | 969304..970260 | + | 957 | WP_257557354.1 | hypothetical protein | - |
| LDB29_RS24595 | 970292..970489 | - | 198 | Protein_851 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| LDB29_RS24600 | 970489..970758 | - | 270 | WP_044660855.1 | type II toxin-antitoxin system ParD family antitoxin | - |
| LDB29_RS24605 | 971033..971365 | - | 333 | WP_103001490.1 | endoribonuclease MazF | Toxin Detail |
| LDB29_RS24610 | 971365..971607 | - | 243 | WP_082166021.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| LDB29_RS24615 | 972309..972566 | + | 258 | WP_048575602.1 | addiction module antitoxin | - |
| LDB29_RS24620 | 972572..972886 | + | 315 | WP_048575603.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| LDB29_RS24625 | 973197..973580 | + | 384 | WP_041380262.1 | IS66 family transposase ISPpa7 | Transposase |
| LDB29_RS24630 | 973577..973924 | + | 348 | WP_011950829.1 | IS66 family transposase ISAzs21 | Transposase |
| LDB29_RS24635 | 974027..975538 | + | 1512 | WP_257557001.1 | IS66 family transposase ISCARN48 | Transposase |
| LDB29_RS24640 | 975801..976997 | - | 1197 | WP_037449607.1 | IS256 family transposase ISRm5 | Transposase |
| LDB29_RS24645 | 977260..977838 | - | 579 | WP_257558028.1 | hypothetical protein | - |
| LDB29_RS24650 | 978341..979288 | - | 948 | WP_257558029.1 | aldo/keto reductase | - |
| LDB29_RS24655 | 979400..980344 | - | 945 | WP_257558030.1 | Gfo/Idh/MocA family oxidoreductase | - |
| LDB29_RS24660 | 980358..980762 | - | 405 | WP_257557355.1 | hypothetical protein | - |
| LDB29_RS24665 | 980785..981627 | - | 843 | WP_257557356.1 | class III extradiol dioxygenase subunit beta | - |
| LDB29_RS24670 | 981627..982040 | - | 414 | WP_257557357.1 | protocatechuate 4,5-dioxygenase subunit alpha | - |
| LDB29_RS24675 | 982037..983053 | - | 1017 | WP_257557358.1 | amidohydrolase family protein | - |
| LDB29_RS24680 | 983050..983910 | - | 861 | WP_257557360.1 | NAD(P)-dependent oxidoreductase | - |
| LDB29_RS24685 | 983993..985141 | - | 1149 | WP_257557362.1 | LysR family transcriptional regulator | - |
| LDB29_RS24690 | 985246..985917 | + | 672 | WP_257557364.1 | 4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase | - |
| LDB29_RS24695 | 985910..986965 | + | 1056 | WP_257557366.1 | 4-oxalomesaconate tautomerase | - |
| LDB29_RS24700 | 986962..987834 | + | 873 | WP_257557368.1 | amidohydrolase family protein | - |
| LDB29_RS24705 | 988029..988238 | + | 210 | WP_257557370.1 | AlpA family phage regulatory protein | - |
| LDB29_RS24710 | 988420..989085 | + | 666 | WP_044660868.1 | peptidylprolyl isomerase | - |
| LDB29_RS24715 | 989241..990509 | - | 1269 | WP_257557372.1 | cation:proton antiporter | - |
| LDB29_RS24720 | 990583..991878 | - | 1296 | WP_257557374.1 | PLP-dependent transferase | - |
| LDB29_RS24725 | 992026..992760 | - | 735 | WP_257557376.1 | cytochrome c oxidase assembly protein | - |
| LDB29_RS24730 | 992852..993067 | - | 216 | WP_025546858.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|