MGE detailed information
MGE type: Prophage MGE length: 51615 bp
Accession: NZ_CP084392 Location: 1647096..1698710 Organism: Pseudochrobactrum sp. XF203 Replicon: chromosome
Accession: NZ_CP084392 Location: 1647096..1698710 Organism: Pseudochrobactrum sp. XF203 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LDL70_RS07305 (LDL70_07305) | 1642462..1643181 | + | 720 | WP_225688105.1 | hypothetical protein | - |
| LDL70_RS07310 (LDL70_07310) | 1643207..1643665 | + | 459 | WP_225688107.1 | DNA mismatch endonuclease Vsr | - |
| LDL70_RS07315 (LDL70_07315) | 1643879..1647109 | + | 3231 | WP_225688109.1 | ATP-binding protein | - |
| LDL70_RS07320 (LDL70_07320) | 1647096..1648781 | + | 1686 | WP_225688111.1 | response regulator receiver domain | - |
| LDL70_RS07325 (LDL70_07325) | 1648783..1649838 | - | 1056 | WP_225688457.1 | DNA cytosine methyltransferase | - |
| LDL70_RS07330 (LDL70_07330) | 1650020..1650745 | + | 726 | WP_225688113.1 | UPF0489 family protein | - |
| LDL70_RS07335 (LDL70_07335) | 1650837..1651061 | - | 225 | WP_225688115.1 | hypothetical protein | - |
| LDL70_RS07340 (LDL70_07340) | 1651158..1651313 | - | 156 | WP_225688117.1 | hypothetical protein | - |
| LDL70_RS07345 (LDL70_07345) | 1651419..1652141 | - | 723 | WP_225688119.1 | glycoside hydrolase family 19 protein | - |
| LDL70_RS07350 (LDL70_07350) | 1652427..1653536 | - | 1110 | WP_225688121.1 | hypothetical protein | - |
| LDL70_RS07355 (LDL70_07355) | 1653533..1654630 | - | 1098 | WP_225688123.1 | hypothetical protein | - |
| LDL70_RS07360 (LDL70_07360) | 1654643..1656832 | - | 2190 | WP_225688125.1 | hypothetical protein | - |
| LDL70_RS07365 (LDL70_07365) | 1656829..1657653 | - | 825 | WP_225688128.1 | hypothetical protein | - |
| LDL70_RS07370 (LDL70_07370) | 1657653..1659587 | - | 1935 | WP_225688130.1 | tape measure protein | - |
| LDL70_RS07375 (LDL70_07375) | 1659580..1659954 | - | 375 | WP_225688132.1 | hypothetical protein | - |
| LDL70_RS07380 (LDL70_07380) | 1659944..1660204 | - | 261 | WP_225688134.1 | hypothetical protein | - |
| LDL70_RS07385 (LDL70_07385) | 1660324..1660710 | - | 387 | WP_225688136.1 | hypothetical protein | - |
| LDL70_RS07390 (LDL70_07390) | 1660827..1662710 | - | 1884 | WP_225688138.1 | hypothetical protein | - |
| LDL70_RS07395 (LDL70_07395) | 1662707..1663210 | - | 504 | WP_225688140.1 | hypothetical protein | - |
| LDL70_RS07400 (LDL70_07400) | 1663198..1664202 | - | 1005 | WP_225688142.1 | hypothetical protein | - |
| LDL70_RS07405 (LDL70_07405) | 1664544..1665014 | - | 471 | WP_225688144.1 | hypothetical protein | - |
| LDL70_RS07410 (LDL70_07410) | 1665029..1665445 | - | 417 | WP_225688146.1 | phage tail terminator-like protein | - |
| LDL70_RS07415 (LDL70_07415) | 1665442..1665870 | - | 429 | WP_225688148.1 | HK97 gp10 family phage protein | - |
| LDL70_RS07420 (LDL70_07420) | 1665870..1666916 | - | 1047 | WP_225688150.1 | phage minor head protein | - |
| LDL70_RS07425 (LDL70_07425) | 1666984..1667355 | + | 372 | WP_225688152.1 | hypothetical protein | - |
| LDL70_RS07430 (LDL70_07430) | 1667374..1667739 | - | 366 | WP_225688154.1 | hypothetical protein | - |
| LDL70_RS07435 (LDL70_07435) | 1667741..1668229 | - | 489 | WP_225688156.1 | hypothetical protein | - |
| LDL70_RS07440 (LDL70_07440) | 1668235..1668492 | - | 258 | WP_225688158.1 | hypothetical protein | - |
| LDL70_RS07445 (LDL70_07445) | 1668541..1669584 | - | 1044 | WP_225688160.1 | DUF6260 family protein | - |
| LDL70_RS07450 (LDL70_07450) | 1669597..1670052 | - | 456 | WP_225688162.1 | hypothetical protein | - |
| LDL70_RS07455 (LDL70_07455) | 1670055..1671167 | - | 1113 | WP_225688164.1 | hypothetical protein | - |
| LDL70_RS07460 (LDL70_07460) | 1671170..1672477 | - | 1308 | WP_225688166.1 | DUF1073 domain-containing protein | - |
| LDL70_RS07465 (LDL70_07465) | 1672543..1673937 | - | 1395 | WP_225688168.1 | PBSX family phage terminase large subunit | - |
| LDL70_RS07470 (LDL70_07470) | 1673897..1674301 | - | 405 | WP_225688170.1 | terminase small subunit | - |
| LDL70_RS07475 (LDL70_07475) | 1674449..1674631 | + | 183 | WP_225688172.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| LDL70_RS07480 (LDL70_07480) | 1674693..1675091 | + | 399 | WP_225688174.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| LDL70_RS07485 (LDL70_07485) | 1675259..1675459 | + | 201 | WP_225688176.1 | hypothetical protein | - |
| LDL70_RS07490 (LDL70_07490) | 1675677..1676057 | + | 381 | WP_225688178.1 | hypothetical protein | - |
| LDL70_RS07495 (LDL70_07495) | 1676266..1676580 | + | 315 | WP_225688180.1 | hypothetical protein | - |
| LDL70_RS07500 (LDL70_07500) | 1676671..1677693 | - | 1023 | WP_225688182.1 | DUF2806 domain-containing protein | - |
| LDL70_RS07505 (LDL70_07505) | 1677925..1678524 | - | 600 | WP_225688184.1 | hypothetical protein | - |
| LDL70_RS07510 (LDL70_07510) | 1678535..1678798 | - | 264 | WP_225688186.1 | DUF2312 domain-containing protein | - |
| LDL70_RS07515 (LDL70_07515) | 1678841..1679743 | - | 903 | WP_225688188.1 | DUF1376 domain-containing protein | - |
| LDL70_RS07520 (LDL70_07520) | 1679740..1681173 | - | 1434 | WP_225688190.1 | DnaB-like helicase C-terminal domain-containing protein | - |
| LDL70_RS07525 (LDL70_07525) | 1681170..1681352 | - | 183 | WP_225688192.1 | hypothetical protein | - |
| LDL70_RS07530 (LDL70_07530) | 1681349..1681564 | - | 216 | WP_225688194.1 | hypothetical protein | - |
| LDL70_RS07535 (LDL70_07535) | 1681548..1681814 | - | 267 | WP_225688196.1 | hypothetical protein | - |
| LDL70_RS07540 (LDL70_07540) | 1681863..1682171 | - | 309 | WP_225688198.1 | hypothetical protein | - |
| LDL70_RS07545 (LDL70_07545) | 1682164..1682469 | - | 306 | WP_225688200.1 | hypothetical protein | - |
| LDL70_RS07550 (LDL70_07550) | 1682466..1682684 | - | 219 | WP_225688202.1 | hypothetical protein | - |
| LDL70_RS07555 (LDL70_07555) | 1682771..1683172 | + | 402 | WP_225688204.1 | hypothetical protein | - |
| LDL70_RS07560 (LDL70_07560) | 1683564..1683800 | + | 237 | WP_225688206.1 | hypothetical protein | - |
| LDL70_RS07565 (LDL70_07565) | 1683793..1684290 | + | 498 | WP_225688208.1 | hypothetical protein | - |
| LDL70_RS07570 (LDL70_07570) | 1684688..1684963 | + | 276 | WP_225688210.1 | hypothetical protein | - |
| LDL70_RS07575 (LDL70_07575) | 1684963..1685133 | + | 171 | WP_220159781.1 | hypothetical protein | - |
| LDL70_RS07580 (LDL70_07580) | 1685219..1685530 | + | 312 | WP_225688212.1 | hypothetical protein | - |
| LDL70_RS07585 (LDL70_07585) | 1685527..1686327 | + | 801 | WP_225688214.1 | RecT family recombinase | - |
| LDL70_RS07590 (LDL70_07590) | 1686324..1686719 | + | 396 | WP_225688216.1 | recombination protein NinB | - |
| LDL70_RS07595 (LDL70_07595) | 1686716..1686928 | + | 213 | WP_225688217.1 | hypothetical protein | - |
| LDL70_RS07600 (LDL70_07600) | 1686925..1687308 | + | 384 | WP_225688218.1 | HNH endonuclease signature motif containing protein | - |
| LDL70_RS07605 (LDL70_07605) | 1687305..1687547 | + | 243 | WP_225688219.1 | hypothetical protein | - |
| LDL70_RS07610 (LDL70_07610) | 1687519..1688694 | + | 1176 | WP_225688220.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| LDL70_RS07615 (LDL70_07615) | 1688908..1689888 | + | 981 | WP_225688221.1 | glycosyltransferase family 2 protein | - |
| LDL70_RS07620 (LDL70_07620) | 1689910..1690788 | + | 879 | WP_225688222.1 | Glucose-1-phosphate thymidylyltransferase | VF |
| LDL70_RS07625 (LDL70_07625) | 1690788..1691339 | + | 552 | WP_225688223.1 | dTDP-4-dehydrorhamnose 3,5-epimerase | VF |
| LDL70_RS07630 (LDL70_07630) | 1691365..1692420 | + | 1056 | WP_225688224.1 | dTDP-glucose 4,6-dehydratase 2 | VF |
| LDL70_RS07635 (LDL70_07635) | 1692428..1693297 | + | 870 | WP_225688225.1 | dTDP-4-dehydrorhamnose reductase | - |
| LDL70_RS07640 (LDL70_07640) | 1693380..1694120 | - | 741 | WP_225688226.1 | Teichoic acids export ATP-binding protein TagH | VF |
| LDL70_RS07645 (LDL70_07645) | 1694124..1695029 | - | 906 | WP_225688227.1 | ABC transporter permease | - |
| LDL70_RS07650 (LDL70_07650) | 1695069..1697300 | - | 2232 | WP_225688228.1 | glycosyltransferase | - |
| LDL70_RS07655 (LDL70_07655) | 1697778..1698710 | - | 933 | WP_225688229.1 | NAD-dependent epimerase/dehydratase family protein | - |
| LDL70_RS07660 (LDL70_07660) | 1698738..1701305 | - | 2568 | WP_225688230.1 | rhamnan synthesis F family protein | - |
| LDL70_RS07665 (LDL70_07665) | 1701340..1702416 | - | 1077 | WP_225688231.1 | class I SAM-dependent methyltransferase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|