MGE detailed information
MGE type: Mobilizable plasmid MGE length: 19159 bp
Accession: NZ_CP084344 Location: 1..19159 Organism: Yersinia pestis strain 20 Replicon: plasmid unnamed1
Accession: NZ_CP084344 Location: 1..19159 Organism: Yersinia pestis strain 20 Replicon: plasmid unnamed1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LDH65_RS20880 (LDH65_20860) | 450..797 | - | 348 | WP_256527418.1 | hypothetical protein | - |
| LDH65_RS20885 (LDH65_20865) | 1016..2075 | + | 1060 | Protein_2 | pesticin | - |
| LDH65_RS20890 (LDH65_20870) | 2110..2532 | - | 423 | Protein_3 | pesticin immunity protein | - |
| LDH65_RS20895 (LDH65_20875) | 3765..3917 | - | 153 | Protein_4 | Rop family plasmid primer RNA-binding protein | - |
| LDH65_RS20900 (LDH65_20880) | 4972..5749 | - | 778 | Protein_5 | IS21-like element helper ATPase IstB | - |
| LDH65_RS20905 (LDH65_20885) | 5752..6773 | - | 1022 | Protein_6 | IS21 family transposase IS100kyp | Transposase |
| LDH65_RS20910 (LDH65_20890) | 8039..8380 | + | 342 | WP_002225538.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| LDH65_RS20915 (LDH65_20895) | 8380..8679 | + | 300 | WP_002213446.1 | XRE family transcriptional regulator | Antitoxin Detail |
| LDH65_RS20920 (LDH65_20900) | 8866..9804 | - | 939 | WP_002218234.1 | Coagulase/fibrinolysin | VF |
| LDH65_RS20925 (LDH65_20905) | 10047..10352 | - | 306 | WP_002221218.1 | hypothetical protein | - |
| LDH65_RS20930 (LDH65_20910) | 10580..11653 | + | 1074 | WP_002218509.1 | pesticin | - |
| LDH65_RS20935 (LDH65_20915) | 11688..12083 | - | 396 | WP_223661135.1 | pesticin immunity protein | - |
| LDH65_RS20940 (LDH65_20920) | 13349..13543 | - | 195 | WP_002213433.1 | Rop family plasmid primer RNA-binding protein | - |
| LDH65_RS20945 (LDH65_20925) | 14580..15362 | - | 783 | WP_001317493.1 | IS21 family transposase IS100kyp | Transposase |
| LDH65_RS20950 (LDH65_20930) | 15359..16381 | - | 1023 | WP_000255944.1 | IS21 family transposase IS100kyp | Transposase |
| LDH65_RS20955 (LDH65_20935) | 17648..17989 | + | 342 | WP_002225538.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| LDH65_RS20960 (LDH65_20940) | 17989..18288 | + | 300 | WP_002213446.1 | XRE family transcriptional regulator | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|