MGE detailed information
MGE type: IScluster/Tn MGE length: 8376 bp
Accession: NZ_CP084254 Location: 10498..18873 Organism: Caballeronia sp. Sq4a Replicon: plasmid p2
Accession: NZ_CP084254 Location: 10498..18873 Organism: Caballeronia sp. Sq4a Replicon: plasmid p2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LDZ24_RS27605 | 5529..6107 | + | 579 | WP_248324887.1 | zinc ribbon domain-containing protein | - |
| LDZ24_RS27610 | 6267..7697 | + | 1431 | WP_248324889.1 | ATP-binding protein | - |
| LDZ24_RS27615 | 8774..9979 | - | 1206 | WP_248324891.1 | GAF domain-containing sensor histidine kinase | - |
| LDZ24_RS27620 | 10203..10432 | + | 230 | Protein_8 | integrase | - |
| LDZ24_RS27625 | 10498..11265 | - | 768 | WP_248324924.1 | IS21 family transposase ISCARN17 | Transposase |
| LDZ24_RS27630 | 11268..12844 | - | 1577 | Protein_10 | IS21 family transposase | - |
| LDZ24_RS27635 | 13126..14649 | + | 1524 | WP_087129150.1 | IS21 family transposase ISCARN16 | Transposase |
| LDZ24_RS27640 | 14642..15442 | + | 801 | WP_248324893.1 | IS21 family transposase ISCARN16 | Transposase |
| LDZ24_RS27645 | 15763..15915 | - | 153 | WP_248324894.1 | hypothetical protein | - |
| LDZ24_RS27650 | 15947..16123 | - | 177 | WP_248324896.1 | hypothetical protein | - |
| LDZ24_RS27655 | 16140..16541 | - | 402 | WP_248324898.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| LDZ24_RS27660 | 16541..16777 | - | 237 | WP_248324899.1 | type II toxin-antitoxin system VapB family antitoxin | Antitoxin Detail |
| LDZ24_RS27665 | 17339..17511 | + | 173 | Protein_17 | DUF4148 domain-containing protein | - |
| LDZ24_RS27670 | 17636..18873 | + | 1238 | WP_248324902.1 | IS3 family transposase IS1416 | Transposase |
| LDZ24_RS27675 | 19311..21365 | - | 2055 | WP_248324904.1 | response regulator | - |
| LDZ24_RS27680 | 21373..22872 | - | 1500 | WP_248324906.1 | ATPase domain-containing protein | - |
| LDZ24_RS27685 | 22862..23224 | - | 363 | WP_248324908.1 | HigA family addiction module antitoxin | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|