MGE detailed information
MGE type: Prophage MGE length: 65596 bp
Accession: NZ_CP084222 Location: 899538..965133 Organism: Arsenophonus apicola strain ArsBeeUS Replicon: chromosome
Accession: NZ_CP084222 Location: 899538..965133 Organism: Arsenophonus apicola strain ArsBeeUS Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LDL57_RS03875 (LDL57_03875) | 894817..897159 | + | 2343 | WP_225507465.1 | LPS assembly protein LptD | - |
| LDL57_RS03880 (LDL57_03880) | 897243..898544 | + | 1302 | WP_225507089.1 | peptidylprolyl isomerase SurA | - |
| LDL57_RS03885 (LDL57_03885) | 898550..899545 | + | 996 | WP_180560138.1 | 4-hydroxythreonine-4-phosphate dehydrogenase PdxA | - |
| LDL57_RS03890 (LDL57_03890) | 899538..900347 | + | 810 | WP_180560137.1 | 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA | - |
| LDL57_RS03895 (LDL57_03895) | 900371..900748 | + | 378 | WP_180560136.1 | Co2+/Mg2+ efflux protein ApaG | - |
| LDL57_RS03900 (LDL57_03900) | 900751..901569 | + | 819 | WP_180560135.1 | bis(5'-nucleosyl)-tetraphosphatase (symmetrical) ApaH | - |
| LDL57_RS03905 (LDL57_03905) | 901825..902319 | - | 495 | WP_180560134.1 | type 3 dihydrofolate reductase | - |
| LDL57_RS03910 (LDL57_03910) | 902541..903956 | - | 1416 | WP_225507091.1 | cell division protein FtsP | - |
| LDL57_RS03915 (LDL57_03915) | 904165..904899 | - | 735 | WP_180560132.1 | 1-acylglycerol-3-phosphate O-acyltransferase | - |
| LDL57_RS03920 (LDL57_03920) | 904951..907206 | - | 2256 | WP_225507093.1 | DNA topoisomerase IV subunit A | - |
| LDL57_RS03925 (LDL57_03925) | 907243..909138 | - | 1896 | WP_180560130.1 | DNA topoisomerase IV subunit B | - |
| LDL57_RS03930 (LDL57_03930) | 909235..909819 | - | 585 | WP_180560129.1 | esterase YqiA | - |
| LDL57_RS03935 (LDL57_03935) | 909819..910157 | - | 339 | Protein_750 | 3',5'-cyclic-AMP phosphodiesterase | - |
| LDL57_RS03940 (LDL57_03940) | 910200..911423 | - | 1224 | Protein_751 | transposase | - |
| LDL57_RS03945 (LDL57_03945) | 911482..911886 | + | 405 | WP_225505529.1 | IS200-IS605 family transposase ISSen6 | Transposase |
| LDL57_RS03950 (LDL57_03950) | 911962..912471 | - | 510 | Protein_753 | 3',5'-cyclic-AMP phosphodiesterase | - |
| LDL57_RS03955 (LDL57_03955) | 912578..913225 | - | 648 | WP_180560127.1 | ADP-ribose diphosphatase | - |
| LDL57_RS03960 (LDL57_03960) | 913459..914841 | + | 1383 | WP_225507095.1 | outer membrane channel protein TolC | - |
| LDL57_RS03965 (LDL57_03965) | 915052..915786 | + | 735 | WP_180560162.1 | DUF1190 family protein | - |
| LDL57_RS03970 (LDL57_03970) | 915792..916952 | + | 1161 | WP_180560125.1 | glutathionylspermidine synthase family protein | - |
| LDL57_RS03975 (LDL57_03975) | 917273..917926 | - | 654 | WP_225507097.1 | 3,4-dihydroxy-2-butanone-4-phosphate synthase | - |
| LDL57_RS03980 (LDL57_03980) | 918452..918718 | + | 267 | WP_180560123.1 | accessory factor UbiK family protein | - |
| LDL57_RS03985 (LDL57_03985) | 918772..920199 | - | 1428 | WP_225507099.1 | Bifunctional protein HldE | VF |
| LDL57_RS03990 (LDL57_03990) | 920310..923162 | - | 2853 | WP_180560121.1 | bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase | - |
| LDL57_RS03995 (LDL57_03995) | 923176..924132 | - | 957 | WP_180560120.1 | CYTH domain-containing protein | - |
| LDL57_RS04000 (LDL57_04000) | 924615..925238 | + | 624 | WP_180560119.1 | TIGR04211 family SH3 domain-containing protein | - |
| LDL57_RS04005 (LDL57_04005) | 925249..926487 | + | 1239 | WP_180560118.1 | multifunctional CCA addition/repair protein | - |
| LDL57_RS04010 (LDL57_04010) | 926489..926851 | - | 363 | WP_180560117.1 | bifunctional dihydroneopterin aldolase/7,8-dihydroneopterin epimerase | - |
| LDL57_RS04015 (LDL57_04015) | 927214..927870 | + | 657 | WP_180560116.1 | glycerol-3-phosphate 1-O-acyltransferase PlsY | - |
| LDL57_RS04020 (LDL57_04020) | 927893..928933 | - | 1041 | WP_180560115.1 | tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD | - |
| LDL57_RS04025 (LDL57_04025) | 929256..929471 | + | 216 | WP_026821546.1 | 30S ribosomal protein S21 | - |
| LDL57_RS04030 (LDL57_04030) | 929584..931329 | + | 1746 | WP_180560114.1 | DNA primase | - |
| LDL57_RS04035 (LDL57_04035) | 931511..933358 | + | 1848 | WP_180560113.1 | RNA polymerase sigma factor RpoD | - |
| LDL57_RS04040 (LDL57_04040) | 933901..934917 | - | 1017 | WP_180560112.1 | Tyrosine recombinase XerD ; Integrase | Integrase |
| LDL57_RS04045 (LDL57_04045) | 934930..935418 | - | 489 | WP_180560111.1 | hypothetical protein | - |
| LDL57_RS04050 (LDL57_04050) | 935428..936015 | - | 588 | WP_180560161.1 | phage repressor protein CI | - |
| LDL57_RS04055 (LDL57_04055) | 936155..936379 | + | 225 | WP_225507101.1 | regulatory phage cox family protein | - |
| LDL57_RS04060 (LDL57_04060) | 936410..936919 | + | 510 | WP_180560109.1 | phage regulatory CII family protein | - |
| LDL57_RS04065 (LDL57_04065) | 937120..937470 | + | 351 | WP_180560108.1 | DUF5347 family protein | - |
| LDL57_RS04070 (LDL57_04070) | 937542..937784 | + | 243 | WP_225507103.1 | hypothetical protein | - |
| LDL57_RS04075 (LDL57_04075) | 937791..938372 | - | 582 | WP_180560107.1 | hypothetical protein | - |
| LDL57_RS04080 (LDL57_04080) | 938471..940483 | + | 2013 | WP_225507104.1 | replication endonuclease | - |
| LDL57_RS04085 (LDL57_04085) | 940455..940598 | + | 144 | WP_225507106.1 | hypothetical protein | - |
| LDL57_RS04090 (LDL57_04090) | 941104..941409 | - | 306 | Protein_781 | ogr/Delta-like zinc finger family protein | - |
| LDL57_RS04095 (LDL57_04095) | 941409..942410 | - | 1002 | WP_225507446.1 | phage portal protein | - |
| LDL57_RS04100 (LDL57_04100) | 942440..944227 | - | 1788 | WP_225507108.1 | terminase family protein | - |
| LDL57_RS04105 (LDL57_04105) | 944392..945237 | + | 846 | WP_225507111.1 | GPO family capsid scaffolding protein | - |
| LDL57_RS04110 (LDL57_04110) | 945293..946318 | + | 1026 | WP_225507113.1 | phage major capsid protein, P2 family | - |
| LDL57_RS04115 (LDL57_04115) | 946318..947025 | + | 708 | WP_225507115.1 | phage terminase small subunit | - |
| LDL57_RS04120 (LDL57_04120) | 947124..947576 | + | 453 | WP_225506947.1 | head completion/stabilization protein | - |
| LDL57_RS04125 (LDL57_04125) | 947573..948046 | + | 474 | WP_225506945.1 | phage tail protein | - |
| LDL57_RS04130 (LDL57_04130) | 948043..948792 | + | 750 | WP_225507467.1 | hypothetical protein | - |
| LDL57_RS04135 (LDL57_04135) | 948805..949923 | + | 1119 | WP_225506943.1 | DUF2586 domain-containing protein | - |
| LDL57_RS04140 (LDL57_04140) | 949923..950378 | + | 456 | WP_225506942.1 | DUF2597 family protein | - |
| LDL57_RS04145 (LDL57_04145) | 950391..950685 | + | 295 | Protein_792 | phage holin family protein | - |
| LDL57_RS04150 (LDL57_04150) | 950682..951097 | + | 416 | Protein_793 | structural protein | - |
| LDL57_RS04155 (LDL57_04155) | 951094..951471 | + | 378 | WP_225506935.1 | hypothetical protein | - |
| LDL57_RS04160 (LDL57_04160) | 951398..951579 | + | 182 | Protein_795 | hypothetical protein | - |
| LDL57_RS04165 (LDL57_04165) | 951572..951835 | + | 264 | WP_225506931.1 | putative phage tail assembly chaperone | - |
| LDL57_RS04170 (LDL57_04170) | 952023..952886 | + | 864 | WP_225507117.1 | phage tail tape measure protein | - |
| LDL57_RS04175 (LDL57_04175) | 952919..954118 | + | 1200 | WP_225507119.1 | hypothetical protein | - |
| LDL57_RS04180 (LDL57_04180) | 954111..954446 | + | 336 | WP_225506926.1 | DUF2590 family protein | - |
| LDL57_RS04185 (LDL57_04185) | 954436..955626 | + | 1191 | WP_225507121.1 | baseplate J/gp47 family protein | - |
| LDL57_RS04190 (LDL57_04190) | 955613..956230 | + | 618 | WP_225507123.1 | phage tail protein | - |
| LDL57_RS04195 (LDL57_04195) | 956244..957905 | + | 1662 | WP_225507125.1 | phage tail protein | - |
| LDL57_RS04200 (LDL57_04200) | 957916..958335 | + | 420 | WP_225507127.1 | tail fiber assembly protein | - |
| LDL57_RS04205 (LDL57_04205) | 959037..959603 | + | 567 | WP_225507469.1 | hypothetical protein | - |
| LDL57_RS04210 (LDL57_04210) | 959606..961282 | + | 1677 | WP_225507128.1 | phage baseplate assembly protein V | - |
| LDL57_RS04215 (LDL57_04215) | 961488..961784 | - | 297 | WP_180560259.1 | NadS family protein | Antitoxin Detail |
| LDL57_RS04220 (LDL57_04220) | 961831..962154 | - | 324 | WP_180560260.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| LDL57_RS04225 (LDL57_04225) | 962557..962856 | + | 300 | Protein_808 | BRO family protein | - |
| LDL57_RS04230 (LDL57_04230) | 963643..964014 | - | 372 | WP_180560262.1 | hypothetical protein | - |
| LDL57_RS04235 (LDL57_04235) | 964531..964857 | + | 327 | Protein_810 | BRO family protein | - |
| LDL57_RS04245 (LDL57_04245) | 965647..966129 | - | 483 | WP_180560264.1 | SsrA-binding protein SmpB | - |
| LDL57_RS04250 (LDL57_04250) | 966287..966721 | + | 435 | WP_026821677.1 | type II toxin-antitoxin system RatA family toxin | - |
| LDL57_RS04255 (LDL57_04255) | 966714..967004 | + | 291 | WP_180560266.1 | RnfH family protein | - |
| LDL57_RS04260 (LDL57_04260) | 967106..967462 | - | 357 | WP_180560267.1 | outer membrane protein assembly factor BamE | - |
| LDL57_RS04265 (LDL57_04265) | 967576..969237 | - | 1662 | WP_225507130.1 | DNA repair protein RecN | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|