MGE detailed information
MGE type: IS/Tn MGE length: 705 bp
Accession: NZ_CP084211 Location: 97427..98131 Organism: Escherichia coli strain EC2648-R2 Replicon: plasmid pKP2648-KPCR
Accession: NZ_CP084211 Location: 97427..98131 Organism: Escherichia coli strain EC2648-R2 Replicon: plasmid pKP2648-KPCR
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LDB16_RS23160 (92472) | 92472..93293 | + | 822 | WP_004152492.1 | DUF932 domain-containing protein | - |
| LDB16_RS23165 (93326) | 93326..93655 | + | 330 | WP_013214015.1 | DUF5983 family protein | - |
| LDB16_RS23170 (93688) | 93688..94173 | - | 486 | WP_014343495.1 | transglycosylase SLT domain-containing protein | - |
| LDB16_RS23175 (94564) | 94564..94980 | + | 417 | WP_014343494.1 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| LDB16_RS23180 (95180) | 95180..95917 | + | 738 | WP_154244330.1 | conjugal transfer protein TrbJ | - |
| LDB16_RS23185 (96032) | 96032..96238 | + | 207 | WP_171773970.1 | TraY domain-containing protein | - |
| LDB16_RS23190 (96300) | 96300..96668 | + | 369 | WP_004194426.1 | type IV conjugative transfer system pilin TraA | - |
| LDB16_RS23195 (96682) | 96682..96987 | + | 306 | WP_004144424.1 | type IV conjugative transfer system protein TraL | - |
| LDB16_RS23200 (97007) | 97007..97372 | + | 366 | Protein_120 | type IV conjugative transfer system protein TraE | - |
| LDB16_RS23205 (97427) | 97427..98131 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| LDB16_RS23210 (98156) | 98156..98356 | + | 201 | WP_072354025.1 | hypothetical protein | - |
| LDB16_RS23215 (98376) | 98376..99122 | + | 747 | WP_000205770.1 | conjugal transfer pilus acetylase TraX | - |
| LDB16_RS23220 (99177) | 99177..99737 | + | 561 | WP_000139328.1 | fertility inhibition protein FinO | - |
| LDB16_RS23225 (99869) | 99869..100069 | + | 201 | WP_015059022.1 | hypothetical protein | - |
| LDB16_RS23230 (100455) | 100455..101054 | + | 600 | WP_032083981.1 | PIN domain-containing protein | - |
| - (101649) | 101649..101708 | - | 60 | NuclAT_0 | - | Antitoxin Detail |
| - (101649) | 101649..101708 | - | 60 | NuclAT_0 | - | Antitoxin Detail |
| - (101649) | 101649..101708 | - | 60 | NuclAT_0 | - | Antitoxin Detail |
| - (101649) | 101649..101708 | - | 60 | NuclAT_0 | - | Antitoxin Detail |
| LDB16_RS23235 (101753) | 101753..101902 | + | 150 | WP_001312851.1 | Hok/Gef family protein | Toxin Detail |
| LDB16_RS23240 (102186) | 102186..102434 | + | 249 | WP_000083837.1 | replication regulatory protein RepA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|