MGE detailed information
MGE type: Genomic_island MGE length: 20029 bp
Accession: NZ_CP084209 Location: 3938633..3958661 Organism: Escherichia coli strain EC2648-R2 Replicon: chromosome
Accession: NZ_CP084209 Location: 3938633..3958661 Organism: Escherichia coli strain EC2648-R2 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LDB16_RS19175 (3934112) | 3934112..3934615 | - | 504 | WP_072647342.1 | type 1 fimbria minor subunit FimG | - |
| LDB16_RS19180 (3934628) | 3934628..3935158 | - | 531 | WP_001244827.1 | type 1 fimbria minor subunit FimF | - |
| LDB16_RS19185 (3935168) | 3935168..3937804 | - | 2637 | WP_000121005.1 | fimbrial usher FimD | - |
| LDB16_RS19190 (3937871) | 3937871..3938596 | - | 726 | WP_000066547.1 | type 1 fimbria chaperone FimC | - |
| LDB16_RS19195 (3938633) | 3938633..3939172 | - | 540 | WP_000824114.1 | hypothetical protein | VF |
| LDB16_RS19200 (3939237) | 3939237..3939785 | - | 549 | WP_000695564.1 | hypothetical protein | VF |
| LDB16_RS19205 (3940267) | 3940267..3940821 | - | 555 | WP_000983104.1 | hypothetical protein | VF |
| LDB16_RS19215 (3942117) | 3942117..3942719 | - | 603 | WP_000790583.1 | hypothetical protein | VF |
| LDB16_RS19220 (3944175) | 3944175..3944891 | + | 717 | WP_001295734.1 | N-acetylneuraminic acid outer membrane channel NanC | - |
| LDB16_RS19225 (3944911) | 3944911..3946017 | + | 1107 | WP_001309184.1 | N-acetylneuraminate epimerase | - |
| LDB16_RS19230 (3946082) | 3946082..3947062 | + | 981 | WP_000991438.1 | 9-O-acetyl-N-acetylneuraminic acid deacetylase | - |
| LDB16_RS19235 (3947172) | 3947172..3947377 | + | 206 | Protein_3779 | HNH endonuclease | - |
| LDB16_RS19240 (3947645) | 3947645..3948885 | - | 1241 | Protein_3780 | helicase YjhR | - |
| LDB16_RS19245 (3949001) | 3949001..3949132 | + | 132 | WP_001309182.1 | hypothetical protein | - |
| LDB16_RS19250 (3949623) | 3949623..3949880 | + | 258 | WP_001054376.1 | YjhX family toxin | Toxin Detail |
| LDB16_RS19255 (3949892) | 3949892..3950437 | + | 546 | WP_001309181.1 | N-acetyltransferase | Antitoxin Detail |
| LDB16_RS19260 (3950493) | 3950493..3951239 | + | 747 | WP_000354251.1 | class I SAM-dependent methyltransferase | - |
| LDB16_RS19265 (3951408) | 3951408..3951626 | + | 219 | Protein_3785 | hypothetical protein | - |
| LDB16_RS19270 (3951664) | 3951664..3951780 | + | 117 | Protein_3786 | VOC family protein | - |
| LDB16_RS19275 (3952025) | 3952025..3953146 | + | 1122 | WP_000010829.1 | M42 family metallopeptidase | - |
| LDB16_RS19280 (3953143) | 3953143..3953421 | + | 279 | WP_000722973.1 | PTS sugar transporter subunit IIB SgcB | - |
| LDB16_RS19285 (3953433) | 3953433..3954746 | + | 1314 | WP_000460843.1 | PTS sugar transporter subunit IIC SgcC | - |
| LDB16_RS19290 (3954759) | 3954759..3955565 | + | 807 | WP_000118626.1 | BtpA family protein SgcQ | - |
| LDB16_RS19295 (3955696) | 3955696..3956127 | + | 432 | WP_000606406.1 | SgcA family PTS sugar transporter subunit IIA | - |
| LDB16_RS19300 (3956139) | 3956139..3956771 | + | 633 | WP_000600622.1 | ribulose-phosphate 3 epimerase family protein | - |
| LDB16_RS19305 (3956788) | 3956788..3957570 | + | 783 | WP_000082780.1 | DeoR/GlpR family DNA-binding transcription regulator | - |
| LDB16_RS19310 (3957873) | 3957873..3958661 | + | 789 | WP_000251798.1 | IclR family transcriptional regulator | - |
| LDB16_RS19315 (3958666) | 3958666..3959571 | + | 906 | WP_000714563.1 | dihydrodipicolinate synthase family protein | - |
| LDB16_RS19320 (3959582) | 3959582..3961549 | + | 1968 | WP_000116326.1 | xylonate dehydratase YjhG | - |
| LDB16_RS19325 (3961656) | 3961656..3963005 | + | 1350 | WP_001128363.1 | GntP family permease | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|