MGE detailed information
MGE type: IS/Tn MGE length: 705 bp
Accession: NZ_CP084208 Location: 15729..16433 Organism: Escherichia coli strain EC2648-R1-1 Replicon: plasmid pKPC-fusion-1
Accession: NZ_CP084208 Location: 15729..16433 Organism: Escherichia coli strain EC2648-R1-1 Replicon: plasmid pKPC-fusion-1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LDB15_RS22415 (10774) | 10774..11595 | + | 822 | WP_004152492.1 | DUF932 domain-containing protein | - |
| LDB15_RS22420 (11628) | 11628..11957 | + | 330 | WP_013214015.1 | DUF5983 family protein | - |
| LDB15_RS22425 (11990) | 11990..12475 | - | 486 | WP_014343495.1 | transglycosylase SLT domain-containing protein | - |
| LDB15_RS22430 (12866) | 12866..13282 | + | 417 | WP_014343494.1 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| LDB15_RS22435 (13482) | 13482..14219 | + | 738 | WP_154244330.1 | conjugal transfer protein TrbJ | - |
| LDB15_RS22440 (14334) | 14334..14540 | + | 207 | WP_171773970.1 | TraY domain-containing protein | - |
| LDB15_RS22445 (14602) | 14602..14970 | + | 369 | WP_004194426.1 | type IV conjugative transfer system pilin TraA | - |
| LDB15_RS22450 (14984) | 14984..15289 | + | 306 | WP_004144424.1 | type IV conjugative transfer system protein TraL | - |
| LDB15_RS22455 (15309) | 15309..15674 | + | 366 | Protein_25 | type IV conjugative transfer system protein TraE | - |
| LDB15_RS22460 (15729) | 15729..16433 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| LDB15_RS22465 (16458) | 16458..16658 | + | 201 | WP_072354025.1 | hypothetical protein | - |
| LDB15_RS22470 (16678) | 16678..17424 | + | 747 | WP_000205770.1 | conjugal transfer pilus acetylase TraX | - |
| LDB15_RS22475 (17479) | 17479..18039 | + | 561 | WP_000139328.1 | fertility inhibition protein FinO | - |
| LDB15_RS22480 (18171) | 18171..18371 | + | 201 | WP_015059022.1 | hypothetical protein | - |
| LDB15_RS22485 (18757) | 18757..19356 | + | 600 | WP_032083981.1 | PIN domain-containing protein | - |
| - (19951) | 19951..20010 | - | 60 | NuclAT_0 | - | Antitoxin Detail |
| - (19951) | 19951..20010 | - | 60 | NuclAT_0 | - | Antitoxin Detail |
| - (19951) | 19951..20010 | - | 60 | NuclAT_0 | - | Antitoxin Detail |
| - (19951) | 19951..20010 | - | 60 | NuclAT_0 | - | Antitoxin Detail |
| LDB15_RS22490 (20055) | 20055..20204 | + | 150 | WP_001312851.1 | Hok/Gef family protein | Toxin Detail |
| LDB15_RS22495 (20488) | 20488..20736 | + | 249 | WP_000083837.1 | replication regulatory protein RepA | - |
| LDB15_RS23395 (20981) | 20981..21055 | + | 75 | WP_001375168.1 | RepA leader peptide Tap | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|