MGE detailed information
MGE type: Genomic_island MGE length: 20029 bp
Accession: NZ_CP084205 Location: 3937669..3957697 Organism: Escherichia coli strain EC2648-R1 Replicon: chromosome
Accession: NZ_CP084205 Location: 3937669..3957697 Organism: Escherichia coli strain EC2648-R1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LDB14_RS19165 (3933148) | 3933148..3933651 | - | 504 | WP_072647342.1 | type 1 fimbria minor subunit FimG | - |
| LDB14_RS19170 (3933664) | 3933664..3934194 | - | 531 | WP_001244827.1 | type 1 fimbria minor subunit FimF | - |
| LDB14_RS19175 (3934204) | 3934204..3936840 | - | 2637 | WP_000121005.1 | fimbrial usher FimD | - |
| LDB14_RS19180 (3936907) | 3936907..3937632 | - | 726 | WP_000066547.1 | type 1 fimbria chaperone FimC | - |
| LDB14_RS19185 (3937669) | 3937669..3938208 | - | 540 | WP_000824114.1 | hypothetical protein | VF |
| LDB14_RS19190 (3938273) | 3938273..3938821 | - | 549 | WP_000695564.1 | hypothetical protein | VF |
| LDB14_RS19195 (3939303) | 3939303..3939857 | - | 555 | WP_000983104.1 | Tyrosine recombinase XerC | VF |
| LDB14_RS19205 (3941153) | 3941153..3941755 | - | 603 | WP_000790583.1 | Tyrosine recombinase XerC | VF |
| LDB14_RS19210 (3943211) | 3943211..3943927 | + | 717 | WP_001295734.1 | N-acetylneuraminic acid outer membrane channel NanC | - |
| LDB14_RS19215 (3943947) | 3943947..3945053 | + | 1107 | WP_001309184.1 | N-acetylneuraminate epimerase | - |
| LDB14_RS19220 (3945118) | 3945118..3946098 | + | 981 | WP_000991438.1 | 9-O-acetyl-N-acetylneuraminic acid deacetylase | - |
| LDB14_RS19225 (3946208) | 3946208..3946413 | + | 206 | Protein_3777 | HNH endonuclease | - |
| LDB14_RS19230 (3946681) | 3946681..3947921 | - | 1241 | Protein_3778 | helicase YjhR | - |
| LDB14_RS19235 (3948037) | 3948037..3948168 | + | 132 | WP_001309182.1 | hypothetical protein | - |
| LDB14_RS19240 (3948659) | 3948659..3948916 | + | 258 | WP_001054376.1 | YjhX family toxin | Toxin Detail |
| LDB14_RS19245 (3948928) | 3948928..3949473 | + | 546 | WP_001309181.1 | N-acetyltransferase | Antitoxin Detail |
| LDB14_RS19250 (3949529) | 3949529..3950275 | + | 747 | WP_000354251.1 | class I SAM-dependent methyltransferase | - |
| LDB14_RS19255 (3950444) | 3950444..3950662 | + | 219 | Protein_3783 | hypothetical protein | - |
| LDB14_RS19260 (3950700) | 3950700..3950816 | + | 117 | Protein_3784 | VOC family protein | - |
| LDB14_RS19265 (3951061) | 3951061..3952182 | + | 1122 | WP_000010829.1 | M42 family metallopeptidase | - |
| LDB14_RS19270 (3952179) | 3952179..3952457 | + | 279 | WP_000722973.1 | PTS sugar transporter subunit IIB SgcB | - |
| LDB14_RS19275 (3952469) | 3952469..3953782 | + | 1314 | WP_000460843.1 | PTS sugar transporter subunit IIC SgcC | - |
| LDB14_RS19280 (3953795) | 3953795..3954601 | + | 807 | WP_000118626.1 | BtpA family protein SgcQ | - |
| LDB14_RS19285 (3954732) | 3954732..3955163 | + | 432 | WP_000606406.1 | SgcA family PTS sugar transporter subunit IIA | - |
| LDB14_RS19290 (3955175) | 3955175..3955807 | + | 633 | WP_000600622.1 | ribulose-phosphate 3 epimerase family protein | - |
| LDB14_RS19295 (3955824) | 3955824..3956606 | + | 783 | WP_000082780.1 | DeoR/GlpR family DNA-binding transcription regulator | - |
| LDB14_RS19300 (3956909) | 3956909..3957697 | + | 789 | WP_000251798.1 | IclR family transcriptional regulator | - |
| LDB14_RS19305 (3957702) | 3957702..3958607 | + | 906 | WP_000714563.1 | dihydrodipicolinate synthase family protein | - |
| LDB14_RS19310 (3958618) | 3958618..3960585 | + | 1968 | WP_000116326.1 | xylonate dehydratase YjhG | - |
| LDB14_RS19315 (3960692) | 3960692..3962041 | + | 1350 | WP_001128363.1 | GntP family permease | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|