MGE detailed information
MGE type: Genomic_island MGE length: 13918 bp
Accession: NZ_CP084205 Location: 3574363..3588280 Organism: Escherichia coli strain EC2648-R1 Replicon: chromosome
Accession: NZ_CP084205 Location: 3574363..3588280 Organism: Escherichia coli strain EC2648-R1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LDB14_RS17430 (3570025) | 3570025..3570252 | + | 228 | WP_001147279.1 | protein YkgL | - |
| LDB14_RS17435 (3570287) | 3570287..3570427 | - | 141 | WP_000866436.1 | type B 50S ribosomal protein L36 | - |
| LDB14_RS17440 (3570427) | 3570427..3570690 | - | 264 | WP_000803998.1 | type B 50S ribosomal protein L31 | - |
| LDB14_RS23355 (3571025) | 3571025..3571108 | - | 84 | Protein_3429 | hypothetical protein | - |
| LDB14_RS17450 (3571629) | 3571629..3571718 | - | 90 | Protein_3430 | hypothetical protein | - |
| LDB14_RS17455 (3572270) | 3572270..3573145 | + | 876 | Protein_3431 | inverse autotransporter beta domain-containing protein | - |
| LDB14_RS17460 (3573204) | 3573204..3574366 | + | 1163 | WP_085947771.1 | IS3-like element IS3 family transposase | - |
| LDB14_RS17465 (3574396) | 3574396..3575049 | - | 654 | Protein_3433 | HTH-type transcriptional activator RhaR | VF |
| LDB14_RS17470 (3575352) | 3575352..3575480 | + | 129 | Protein_3434 | aldo/keto reductase | - |
| LDB14_RS17475 (3575639) | 3575639..3576232 | - | 594 | WP_001299021.1 | reactive chlorine species resistance protein RclC | - |
| LDB14_RS17480 (3576244) | 3576244..3576480 | - | 237 | WP_000474084.1 | reactive chlorine resistance periplasmic protein RclB | - |
| LDB14_RS17485 (3576589) | 3576589..3577914 | - | 1326 | WP_001046307.1 | reactive chlorine resistance oxidoreductase RclA | - |
| LDB14_RS17490 (3578140) | 3578140..3578994 | + | 855 | WP_000339594.1 | reactive chlorine-specific transcriptional regulator RclR | - |
| LDB14_RS17495 (3579521) | 3579521..3580240 | + | 720 | WP_001102108.1 | heterodisulfide reductase-related iron-sulfur binding cluster | - |
| LDB14_RS17500 (3580251) | 3580251..3581360 | + | 1110 | Protein_3440 | LutB/LldF family L-lactate oxidation iron-sulfur protein | - |
| LDB14_RS17510 (3582133) | 3582133..3582456 | - | 324 | Protein_3442 | sigma factor-binding protein Crl | - |
| - (3583174) | 3583174..3583254 | - | 81 | NuclAT_12 | - | - |
| - (3583174) | 3583174..3583254 | - | 81 | NuclAT_12 | - | - |
| - (3583174) | 3583174..3583254 | - | 81 | NuclAT_12 | - | - |
| - (3583174) | 3583174..3583254 | - | 81 | NuclAT_12 | - | - |
| LDB14_RS17515 (3582514) | 3582514..3583758 | - | 1245 | WP_000189532.1 | esterase FrsA | - |
| LDB14_RS17520 (3583850) | 3583850..3584308 | - | 459 | WP_001291990.1 | xanthine phosphoribosyltransferase | - |
| LDB14_RS17525 (3584569) | 3584569..3586026 | + | 1458 | WP_001292994.1 | cytosol nonspecific dipeptidase | - |
| LDB14_RS17530 (3586083) | 3586083..3586604 | - | 522 | Protein_3446 | peptide chain release factor H | - |
| LDB14_RS17535 (3586600) | 3586600..3586806 | - | 207 | Protein_3447 | RtcB family protein | - |
| LDB14_RS17540 (3587124) | 3587124..3587576 | - | 453 | WP_001059892.1 | GNAT family N-acetyltransferase | - |
| LDB14_RS17545 (3587586) | 3587586..3587984 | - | 399 | WP_001263489.1 | type II toxin-antitoxin system mRNA interferase toxin YafO | Toxin Detail |
| LDB14_RS17550 (3587987) | 3587987..3588280 | - | 294 | WP_000554758.1 | type I toxin-antitoxin system antitoxin YafN | Antitoxin Detail |
| LDB14_RS17555 (3588332) | 3588332..3589387 | - | 1056 | WP_001226164.1 | DNA polymerase IV | - |
| LDB14_RS17560 (3589458) | 3589458..3590243 | - | 786 | WP_000207552.1 | putative lateral flagellar export/assembly protein LafU | - |
| LDB14_RS17565 (3590215) | 3590215..3591927 | + | 1713 | Protein_3453 | flagellar biosynthesis protein FlhA | - |
| LDB14_RS17570 (3592151) | 3592151..3592648 | - | 498 | WP_000006255.1 | REP-associated tyrosine transposase RayT | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|