MGE detailed information
MGE type: Genomic_island MGE length: 17012 bp
Accession: NZ_CP084197 Location: 3097427..3114438 Organism: Pantoea agglomerans strain CB1 Replicon: chromosome
Accession: NZ_CP084197 Location: 3097427..3114438 Organism: Pantoea agglomerans strain CB1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LDO72_RS14640 (LDO72_14645) | 3092833..3093069 | + | 237 | WP_003854080.1 | DUF2171 domain-containing protein | - |
| LDO72_RS14645 (LDO72_14650) | 3093243..3093824 | - | 582 | WP_163792416.1 | D-alanyl-D-alanine dipeptidase | - |
| LDO72_RS14650 (LDO72_14655) | 3094338..3094670 | + | 333 | WP_163792414.1 | SymE family type I addiction module toxin | - |
| LDO72_RS14655 (LDO72_14660) | 3094980..3095303 | - | 324 | WP_275102463.1 | hypothetical protein | - |
| LDO72_RS14660 (LDO72_14665) | 3095723..3096049 | + | 327 | WP_072036911.1 | four-helix bundle copper-binding protein | - |
| LDO72_RS14665 (LDO72_14670) | 3096474..3096701 | + | 228 | WP_275103091.1 | DUF333 domain-containing protein | - |
| LDO72_RS14670 (LDO72_14675) | 3097427..3098260 | - | 834 | WP_176971330.1 | DUF4942 domain-containing protein | - |
| LDO72_RS14675 (LDO72_14680) | 3098394..3098762 | - | 369 | WP_275102464.1 | TA system toxin CbtA family protein | Toxin Detail |
| LDO72_RS14680 (LDO72_14685) | 3098825..3099160 | - | 336 | WP_191914503.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| LDO72_RS14685 (LDO72_14690) | 3099172..3099651 | - | 480 | WP_176971328.1 | DNA repair protein RadC | - |
| LDO72_RS14690 (LDO72_14695) | 3099834..3100454 | - | 621 | WP_176971327.1 | hypothetical protein | - |
| LDO72_RS14695 (LDO72_14700) | 3100482..3101036 | - | 555 | WP_176971326.1 | hypothetical protein | - |
| LDO72_RS14700 (LDO72_14705) | 3101279..3102163 | - | 885 | WP_176971325.1 | 50S ribosome-binding GTPase | - |
| LDO72_RS14705 (LDO72_14710) | 3102271..3103071 | - | 801 | WP_275102465.1 | hypothetical protein | - |
| LDO72_RS14710 (LDO72_14715) | 3103687..3103896 | + | 210 | WP_275102466.1 | AlpA family transcriptional regulator | - |
| LDO72_RS14715 (LDO72_14720) | 3104631..3105254 | + | 624 | WP_275102467.1 | inovirus Gp2 family protein | - |
| LDO72_RS14720 (LDO72_14725) | 3105619..3106476 | - | 858 | WP_275102468.1 | hypothetical protein | - |
| LDO72_RS14725 (LDO72_14730) | 3106473..3108221 | - | 1749 | WP_275102469.1 | AAA family ATPase | - |
| LDO72_RS14730 (LDO72_14735) | 3108223..3110217 | - | 1995 | WP_275102470.1 | restriction endonuclease subunit S | - |
| LDO72_RS14735 (LDO72_14740) | 3110217..3111998 | - | 1782 | WP_275102471.1 | N-6 DNA methylase | - |
| LDO72_RS14740 (LDO72_14745) | 3112033..3114438 | - | 2406 | WP_275102472.1 | DEAD/DEAH box helicase family protein | - |
| LDO72_RS14745 (LDO72_14750) | 3115063..3116274 | - | 1212 | WP_275102473.1 | tyrosine-type recombinase/integrase | - |
| LDO72_RS14755 (LDO72_14760) | 3116621..3117124 | - | 504 | WP_275102474.1 | DUF1198 family protein | - |
| LDO72_RS14760 (LDO72_14765) | 3117298..3118164 | + | 867 | WP_275102475.1 | bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD | - |
| LDO72_RS14765 (LDO72_14770) | 3118165..3118377 | + | 213 | WP_003849455.1 | ribosome-associated protein YbcJ | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|