MGE detailed information
MGE type: Prophage MGE length: 38310 bp
Accession: NZ_CP084194 Location: 2102471..2140780 Organism: Salmonella sp. A39 Replicon: chromosome
Accession: NZ_CP084194 Location: 2102471..2140780 Organism: Salmonella sp. A39 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LDO68_RS10280 () | 2098744..2099385 | + | 642 | WP_000800497.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| LDO68_RS10285 () | 2099485..2100663 | - | 1179 | WP_000173431.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| LDO68_RS10290 () | 2100794..2101084 | + | 291 | WP_000257723.1 | DNA damage-inducible protein YebG | - |
| LDO68_RS10295 () | 2101152..2101505 | + | 354 | WP_001042119.1 | protein YebF | - |
| LDO68_RS10300 () | 2101599..2102258 | + | 660 | WP_000024706.1 | tellurite resistance TerB family protein | - |
| LDO68_RS10305 () | 2102471..2104522 | + | 2052 | WP_000936999.1 | oligopeptidase B | - |
| LDO68_RS10310 () | 2104557..2105255 | - | 699 | WP_000944282.1 | exodeoxyribonuclease X | - |
| LDO68_RS10315 () | 2105279..2105935 | - | 657 | WP_000100258.1 | carbon-nitrogen hydrolase family protein | - |
| LDO68_RS10320 () | 2106043..2106273 | - | 231 | WP_000856224.1 | DNA polymerase III subunit theta | - |
| LDO68_RS10325 () | 2106411..2106785 | + | 375 | WP_000168393.1 | CopC domain-containing protein YobA | - |
| LDO68_RS10330 () | 2106786..2107661 | + | 876 | WP_000979702.1 | copper homeostasis membrane protein CopD | - |
| LDO68_RS10335 () | 2107678..2108031 | + | 354 | WP_000722368.1 | YebY family protein | - |
| - | 2108131..2108276 | - | 146 | - | - | Antitoxin Detail |
| - | 2108171..2108274 | + | 104 | - | - | Toxin Detail |
| LDO68_RS10340 () | 2108405..2109328 | - | 924 | Protein_2021 | hypothetical protein ; Integrase | Integrase |
| LDO68_RS10345 () | 2109592..2110053 | - | 462 | Protein_2022 | DNA breaking-rejoining protein | - |
| LDO68_RS10350 () | 2110042..2110233 | + | 192 | Protein_2023 | glycoside hydrolase family 19 protein | - |
| LDO68_RS10355 () | 2110287..2110820 | + | 534 | WP_001050882.1 | DUF2514 domain-containing protein | - |
| LDO68_RS10360 () | 2111077..2111244 | - | 168 | WP_000789530.1 | lytic enzyme | - |
| LDO68_RS10365 () | 2111309..2111497 | - | 189 | WP_001521334.1 | hypothetical protein | - |
| LDO68_RS10370 () | 2111552..2111812 | + | 261 | Protein_2027 | DUF1441 family protein | - |
| LDO68_RS10375 () | 2112027..2112371 | + | 345 | Protein_2028 | macro domain-containing protein | - |
| LDO68_RS10380 () | 2112381..2112851 | + | 471 | Protein_2029 | tail fiber assembly protein | - |
| LDO68_RS10385 () | 2112948..2113148 | - | 201 | WP_010989029.1 | PagK family vesicle-borne virulence factor | - |
| LDO68_RS10390 () | 2113538..2113718 | - | 181 | Protein_2031 | IS3 family transposase | - |
| LDO68_RS10395 () | 2113709..2113810 | + | 102 | Protein_2032 | arsenic transporter | - |
| LDO68_RS10400 () | 2114432..2114664 | + | 233 | Protein_2033 | helix-turn-helix domain-containing protein | - |
| LDO68_RS10405 () | 2114991..2115605 | - | 615 | WP_000848069.1 | disulfide bond formation protein B | - |
| LDO68_RS10410 () | 2115615..2115773 | - | 159 | WP_000480735.1 | DUF5993 family protein | - |
| LDO68_RS10415 () | 2115906..2116820 | - | 915 | WP_001233446.1 | DMT family transporter | - |
| LDO68_RS10420 () | 2118124..2118546 | - | 423 | Protein_2037 | hypothetical protein ; Integrase | Integrase |
| LDO68_RS10425 () | 2118616..2119810 | + | 1195 | Protein_2038 | IS256 family transposase IS285 | Transposase |
| LDO68_RS10430 () | 2119956..2120096 | - | 141 | WP_001617922.1 | hypothetical protein | - |
| LDO68_RS10435 () | 2120262..2120531 | - | 270 | WP_001752421.1 | hypothetical protein | - |
| LDO68_RS10440 () | 2120901..2121320 | + | 420 | WP_000354408.1 | GNAT family N-acetyltransferase | - |
| LDO68_RS10445 () | 2121708..2122184 | - | 477 | WP_000030934.1 | hypothetical protein | - |
| LDO68_RS10450 () | 2122514..2122909 | - | 396 | WP_000422882.1 | DUF1398 domain-containing protein | - |
| LDO68_RS10455 () | 2123593..2124315 | + | 723 | WP_000182072.1 | Guanine nucleotide exchange factor sopE2 | VF |
| LDO68_RS10460 () | 2124600..2124764 | + | 165 | WP_001134856.1 | membrane protein | - |
| LDO68_RS10465 () | 2124988..2125638 | + | 651 | WP_000986176.1 | protein-serine/threonine phosphatase | - |
| LDO68_RS10470 () | 2125657..2125848 | - | 192 | WP_000457836.1 | YebW family protein | - |
| LDO68_RS10475 () | 2125959..2126195 | - | 237 | WP_024131108.1 | YebV family protein | - |
| LDO68_RS10480 () | 2126313..2127752 | - | 1440 | WP_001542138.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| LDO68_RS10485 () | 2127830..2130463 | - | 2634 | WP_001535256.1 | hypothetical protein | VF |
| LDO68_RS10490 () | 2130432..2131715 | - | 1284 | WP_080247963.1 | membrane integrity lipid transport subunit YebS | - |
| LDO68_RS10495 () | 2131844..2132341 | + | 498 | WP_001518229.1 | GAF domain-containing protein | - |
| LDO68_RS10500 () | 2132439..2133125 | + | 687 | WP_000431401.1 | RNA chaperone ProQ | - |
| LDO68_RS10505 () | 2133145..2135193 | + | 2049 | WP_080247962.1 | carboxy terminal-processing peptidase | - |
| LDO68_RS10510 () | 2135387..2136268 | + | 882 | WP_000984498.1 | protease HtpX | - |
| LDO68_RS10515 () | 2136316..2137689 | - | 1374 | WP_000416128.1 | MFS transporter | - |
| LDO68_RS10520 () | 2137865..2138656 | + | 792 | WP_001262195.1 | DNA-binding transcriptional regulator KdgR | - |
| LDO68_RS10525 () | 2138868..2139107 | - | 240 | WP_001236777.1 | invasion protein YobH | - |
| LDO68_RS10530 () | 2139265..2139408 | + | 144 | WP_000714547.1 | PhoP/PhoQ regulator MgrB | - |
| LDO68_RS10535 () | 2139479..2139766 | + | 288 | WP_001000660.1 | YebO family protein | - |
| LDO68_RS10540 () | 2140415..2140558 | + | 144 | WP_001537930.1 | DUF2627 domain-containing protein | - |
| LDO68_RS10545 () | 2140571..2140780 | + | 210 | WP_001062678.1 | transcription antiterminator/RNA stability regulator CspE | - |
| LDO68_RS10550 () | 2141000..2142745 | + | 1746 | WP_000730322.1 | peptidoglycan glycosyltransferase FtsI | - |
| LDO68_RS10555 () | 2142811..2143620 | + | 810 | WP_000010923.1 | 23S rRNA (guanine(745)-N(1))-methyltransferase | - |
| LDO68_RS10560 () | 2143617..2144183 | - | 567 | WP_001518359.1 | manganese efflux pump MntP | - |
| LDO68_RS10565 () | 2144593..2145051 | - | 459 | WP_000156280.1 | DUF986 family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|