MGE detailed information
MGE type: Genomic_island MGE length: 26967 bp
Accession: NZ_CP084055 Location: 3833147..3860113 Organism: Escherichia coli strain X14-3 Replicon: chromosome
Accession: NZ_CP084055 Location: 3833147..3860113 Organism: Escherichia coli strain X14-3 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LCR13_RS18715 (3828722) | 3828722..3832954 | + | 4233 | WP_254825353.1 | RHS element core protein | - |
| LCR13_RS18720 (3832932) | 3832932..3833150 | + | 219 | WP_001101841.1 | hypothetical protein | - |
| LCR13_RS18725 (3833147) | 3833147..3833323 | + | 177 | WP_000008098.1 | hypothetical protein | - |
| LCR13_RS18730 (3833754) | 3833754..3834890 | + | 1137 | WP_254825354.1 | ISAs1 family transposase ISEc1 | Transposase |
| LCR13_RS18735 (3834931) | 3834931..3835701 | - | 771 | WP_254825355.1 | 2-oxoglutaramate amidase | - |
| LCR13_RS18740 (3835882) | 3835882..3836328 | + | 447 | WP_001308392.1 | Ivy family C-type lysozyme inhibitor | - |
| LCR13_RS18745 (3836371) | 3836371..3838815 | - | 2445 | WP_000973083.1 | Crotonobetainyl-CoA dehydrogenase | VF |
| LCR13_RS18750 (3839055) | 3839055..3839633 | + | 579 | WP_000284050.1 | Phosphoheptose isomerase | VF |
| LCR13_RS18755 (3839738) | 3839738..3840505 | + | 768 | WP_000333380.1 | class II glutamine amidotransferase | - |
| LCR13_RS18760 (3840476) | 3840476..3841216 | - | 741 | WP_001225679.1 | peptidoglycan meso-diaminopimelic acid protein amidase | - |
| LCR13_RS18765 (3841372) | 3841372..3841641 | - | 270 | Protein_3667 | type II toxin-antitoxin system YafQ family toxin | - |
| LCR13_RS18770 (3841644) | 3841644..3841904 | - | 261 | WP_000729704.1 | type II toxin-antitoxin system antitoxin DinJ | - |
| LCR13_RS18775 (3842090) | 3842090..3842863 | + | 774 | WP_001355630.1 | hypothetical protein | VF |
| LCR13_RS18780 (3843039) | 3843039..3843536 | + | 498 | WP_254825356.1 | REP-associated tyrosine transposase RayT | - |
| LCR13_RS18785 (3843760) | 3843760..3845472 | - | 1713 | Protein_3671 | hypothetical protein | VF |
| LCR13_RS18790 (3845444) | 3845444..3846229 | + | 786 | WP_000207564.1 | hypothetical protein | VF |
| LCR13_RS18795 (3846300) | 3846300..3847355 | + | 1056 | WP_001226164.1 | DNA polymerase IV | - |
| LCR13_RS18800 (3847407) | 3847407..3847700 | + | 294 | WP_000554757.1 | type I toxin-antitoxin system antitoxin YafN | Antitoxin Detail |
| LCR13_RS18805 (3847703) | 3847703..3848101 | + | 399 | WP_001263493.1 | type II toxin-antitoxin system mRNA interferase toxin YafO | Toxin Detail |
| LCR13_RS18810 (3848111) | 3848111..3848563 | + | 453 | WP_001059847.1 | GNAT family N-acetyltransferase | - |
| LCR13_RS18815 (3848809) | 3848809..3849012 | + | 204 | Protein_3677 | RtcB family protein | - |
| LCR13_RS18820 (3849011) | 3849011..3849532 | + | 522 | Protein_3678 | peptide chain release factor H | - |
| LCR13_RS18825 (3849589) | 3849589..3851046 | - | 1458 | WP_001293003.1 | cytosol nonspecific dipeptidase | - |
| LCR13_RS18830 (3851307) | 3851307..3851765 | + | 459 | WP_254825357.1 | xanthine phosphoribosyltransferase | - |
| - (3852361) | 3852361..3852441 | + | 81 | NuclAT_11 | - | - |
| - (3852361) | 3852361..3852441 | + | 81 | NuclAT_11 | - | - |
| - (3852361) | 3852361..3852441 | + | 81 | NuclAT_11 | - | - |
| - (3852361) | 3852361..3852441 | + | 81 | NuclAT_11 | - | - |
| LCR13_RS18835 (3851857) | 3851857..3853101 | + | 1245 | WP_000189541.1 | esterase FrsA | - |
| LCR13_RS18840 (3853159) | 3853159..3853560 | + | 402 | WP_000174677.1 | sigma factor-binding protein Crl | - |
| LCR13_RS18845 (3853599) | 3853599..3854654 | - | 1056 | WP_000749863.1 | phosphoporin PhoE | - |
| LCR13_RS18850 (3854942) | 3854942..3856045 | + | 1104 | WP_001285288.1 | glutamate 5-kinase | - |
| LCR13_RS18855 (3856057) | 3856057..3857310 | + | 1254 | WP_000893278.1 | glutamate-5-semialdehyde dehydrogenase | - |
| LCR13_RS18865 (3857727) | 3857727..3858584 | + | 858 | WP_000523418.1 | hypothetical protein | - |
| LCR13_RS18870 (3858706) | 3858706..3858924 | + | 219 | WP_001473831.1 | AlpA family phage regulatory protein | - |
| LCR13_RS18875 (3859046) | 3859046..3860113 | + | 1068 | WP_254825358.1 | inovirus-type Gp2 protein | - |
| LCR13_RS18880 (3860100) | 3860100..3860813 | + | 714 | WP_000119302.1 | hypothetical protein | - |
| LCR13_RS18885 (3861335) | 3861335..3864577 | - | 3243 | WP_254825359.1 | type I Zorya anti-phage system protein ZorD | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|