MGE detailed information
MGE type: Genomic_island MGE length: 19253 bp
Accession: NZ_CP084026 Location: 3884600..3903852 Organism: Escherichia coli strain 035053C1pKPC2_Vir_090515B1 Replicon: chromosome
Accession: NZ_CP084026 Location: 3884600..3903852 Organism: Escherichia coli strain 035053C1pKPC2_Vir_090515B1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LC440_RS19055 (3880079) | 3880079..3880582 | - | 504 | WP_000870592.1 | type 1 fimbria minor subunit FimG | - |
| LC440_RS19060 (3880595) | 3880595..3881125 | - | 531 | WP_001244827.1 | type 1 fimbria minor subunit FimF | - |
| LC440_RS19065 (3881135) | 3881135..3883771 | - | 2637 | WP_000121005.1 | fimbrial usher FimD | - |
| LC440_RS19070 (3883838) | 3883838..3884563 | - | 726 | WP_000066547.1 | type 1 fimbria chaperone FimC | - |
| LC440_RS19075 (3884600) | 3884600..3885139 | - | 540 | WP_000824114.1 | hypothetical protein | VF |
| LC440_RS19080 (3885204) | 3885204..3885752 | - | 549 | WP_000695564.1 | hypothetical protein | VF |
| LC440_RS19085 (3886234) | 3886234..3886830 | - | 597 | WP_000044711.1 | Tyrosine recombinase XerC | VF |
| LC440_RS19090 (3887308) | 3887308..3887910 | - | 603 | WP_000790583.1 | Tyrosine recombinase XerC | VF |
| LC440_RS19095 (3889366) | 3889366..3890082 | + | 717 | WP_001295734.1 | N-acetylneuraminic acid outer membrane channel NanC | - |
| LC440_RS19100 (3890102) | 3890102..3891208 | + | 1107 | WP_001309184.1 | N-acetylneuraminate epimerase | - |
| LC440_RS19105 (3891273) | 3891273..3892253 | + | 981 | WP_000991438.1 | 9-O-acetyl-N-acetylneuraminic acid deacetylase | - |
| LC440_RS19110 (3892363) | 3892363..3892568 | + | 206 | Protein_3735 | HNH endonuclease | - |
| LC440_RS19115 (3892836) | 3892836..3894076 | - | 1241 | Protein_3736 | helicase YjhR | - |
| LC440_RS19120 (3894192) | 3894192..3894323 | + | 132 | WP_001309182.1 | hypothetical protein | - |
| LC440_RS19125 (3894814) | 3894814..3895071 | + | 258 | WP_001054376.1 | YjhX family toxin | Toxin Detail |
| LC440_RS19130 (3895083) | 3895083..3895628 | + | 546 | WP_001309181.1 | N-acetyltransferase | Antitoxin Detail |
| LC440_RS19135 (3895684) | 3895684..3896430 | + | 747 | WP_000354251.1 | class I SAM-dependent methyltransferase | - |
| LC440_RS19140 (3896599) | 3896599..3896817 | + | 219 | Protein_3741 | hypothetical protein | - |
| LC440_RS19145 (3896855) | 3896855..3896971 | + | 117 | Protein_3742 | VOC family protein | - |
| LC440_RS19150 (3897216) | 3897216..3898337 | + | 1122 | WP_000010829.1 | M42 family metallopeptidase | - |
| LC440_RS19155 (3898334) | 3898334..3898612 | + | 279 | WP_000722973.1 | PTS sugar transporter subunit IIB SgcB | - |
| LC440_RS19160 (3898624) | 3898624..3899937 | + | 1314 | WP_000460843.1 | PTS sugar transporter subunit IIC SgcC | - |
| LC440_RS19165 (3899950) | 3899950..3900756 | + | 807 | WP_000118626.1 | BtpA family protein SgcQ | - |
| LC440_RS19170 (3900887) | 3900887..3901318 | + | 432 | WP_000606406.1 | SgcA family PTS sugar transporter subunit IIA | - |
| LC440_RS19175 (3901330) | 3901330..3901962 | + | 633 | WP_000600622.1 | ribulose-phosphate 3 epimerase family protein | - |
| LC440_RS19180 (3901979) | 3901979..3902761 | + | 783 | WP_000082780.1 | DeoR/GlpR family DNA-binding transcription regulator | - |
| LC440_RS19185 (3903064) | 3903064..3903852 | + | 789 | WP_000251798.1 | IclR family transcriptional regulator | - |
| LC440_RS19190 (3903857) | 3903857..3904762 | + | 906 | WP_000714563.1 | dihydrodipicolinate synthase family protein | - |
| LC440_RS19195 (3904773) | 3904773..3906740 | + | 1968 | WP_000116326.1 | xylonate dehydratase YjhG | - |
| LC440_RS19200 (3906847) | 3906847..3908196 | + | 1350 | WP_001128363.1 | GntP family permease | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|