MGE detailed information
MGE type: Genomic_island MGE length: 12810 bp
Accession: NZ_CP084026 Location: 2155337..2168146 Organism: Escherichia coli strain 035053C1pKPC2_Vir_090515B1 Replicon: chromosome
Accession: NZ_CP084026 Location: 2155337..2168146 Organism: Escherichia coli strain 035053C1pKPC2_Vir_090515B1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LC440_RS10545 (2155337) | 2155337..2155603 | + | 267 | WP_001301023.1 | type II toxin-antitoxin system antitoxin HipB | Antitoxin Detail |
| LC440_RS10550 (2155603) | 2155603..2156925 | + | 1323 | WP_001125439.1 | type II toxin-antitoxin system serine/threonine protein kinase toxin HipA | Toxin Detail |
| LC440_RS10555 (2157237) | 2157237..2157445 | + | 209 | Protein_2062 | AraC family transcriptional regulator | - |
| LC440_RS10560 (2157700) | 2157700..2158926 | + | 1227 | Protein_2063 | hypothetical protein | VF |
| LC440_RS10565 (2158940) | 2158940..2159470 | + | 531 | WP_000876763.1 | hypothetical protein | VF |
| LC440_RS10570 (2159483) | 2159483..2159986 | + | 504 | WP_000825452.1 | hypothetical protein | VF |
| LC440_RS10575 (2160045) | 2160045..2160959 | + | 915 | WP_000520676.1 | hypothetical protein | VF |
| LC440_RS10580 (2161293) | 2161293..2163572 | + | 2280 | WP_000726691.1 | acid resistance putative oxidoreductase YdeP | - |
| LC440_RS10585 (2163820) | 2163820..2164017 | + | 198 | WP_000543384.1 | two-component system connector SafA | - |
| LC440_RS10590 (2164092) | 2164092..2164853 | + | 762 | WP_000060495.1 | acid stress response transcriptional regulator YdeO | - |
| LC440_RS10595 (2165255) | 2165255..2166937 | + | 1683 | WP_001295684.1 | sulfatase | - |
| LC440_RS10600 (2166989) | 2166989..2168146 | + | 1158 | WP_001301030.1 | anaerobic sulfatase maturase | - |
| LC440_RS10605 (2168112) | 2168112..2168234 | - | 123 | WP_120795387.1 | protein YneP | - |
| LC440_RS10610 (2168437) | 2168437..2170122 | + | 1686 | WP_000628576.1 | ABC transporter ATP-binding protein/permease | - |
| LC440_RS10615 (2170160) | 2170160..2172532 | + | 2373 | WP_000832437.1 | TonB-dependent receptor plug domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli K-12 strain ER3413 | Genomic island | TA20025 | CP009789 | 1561271..1572871 | 0.003 | |
| Escherichia coli str. K-12 substr. MC4100 | Genomic island | TA20066 | HG738867 | 1469371..1480971 | 0.003 | |
| Escherichia coli str. K-12 substr. MG1655 | Genomic island | TA1040 | NC_000913 | 1580842..1592442 | 0.003 | |
| Escherichia coli str. K-12 substr. W3110 | Genomic island | TA21437 | NC_007779 | 1582556..1594156 | 0.003 | |
| Escherichia coli HS | Genomic island | TA22421 | NC_009800 | 1597665..1609265 | 0.005 | |
| Escherichia coli str. K-12 substr. DH10B | Genomic island | TA22685 | NC_010473 | 1669461..1680091 | 0.005 | |
| Escherichia coli BW2952 | Genomic island | TA23853 | NC_012759 | 1470925..1482525 | 0.003 | |
| Escherichia coli DH1 | Genomic island | TA27403 | NC_017638 | 1563024..1574624 | 0.003 | |
| Escherichia coli str. K-12 substr. MDS42 | Genomic island | TA29002 | NC_020518 | 1287669..1299269 | 0.003 | |
| Escherichia coli BW25113 | Genomic island | TA48682 | NZ_CP009273 | 1575099..1586699 | 0.003 | |
| Escherichia coli str. K-12 substr. W3110 strain K-12 substr. ZK126 | Genomic island | TA68424 | NZ_CP017979 | 1484612..1496212 | 0.003 | |
| Escherichia coli strain DH5alpha | Genomic island | TA90478 | NZ_CP025520 | 438284..449884 | 0.003 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Genomic island | TA285016 | NZ_HG738867 | 1469371..1480971 | 0.003 |