MGE detailed information
MGE type: Prophage MGE length: 41941 bp
Accession: NZ_CP084026 Location: 2091035..2132975 Organism: Escherichia coli strain 035053C1pKPC2_Vir_090515B1 Replicon: chromosome
Accession: NZ_CP084026 Location: 2091035..2132975 Organism: Escherichia coli strain 035053C1pKPC2_Vir_090515B1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LC440_RS10120 (2087284) | 2087284..2089710 | - | 2427 | WP_000041675.1 | DmsA/YnfE/YnfF family dimethyl sulfoxide reductase | - |
| LC440_RS10125 (2089909) | 2089909..2090214 | - | 306 | WP_001300836.1 | DUF1161 domain-containing protein | - |
| LC440_RS10130 (2090322) | 2090322..2091032 | + | 711 | WP_001321287.1 | YnfC family lipoprotein | - |
| LC440_RS10135 (2091035) | 2091035..2091595 | - | 561 | WP_001138581.1 | spermidine N1-acetyltransferase | - |
| LC440_RS10140 (2091630) | 2091630..2091971 | - | 342 | WP_000705211.1 | DUF1283 family protein | - |
| LC440_RS10145 (2092106) | 2092106..2092432 | + | 327 | WP_000598292.1 | YnfA family protein | - |
| LC440_RS10150 (2092638) | 2092638..2093852 | + | 1215 | WP_001295394.1 | starvation-sensing protein RspA | - |
| LC440_RS10155 (2093864) | 2093864..2094883 | + | 1020 | WP_000836066.1 | Zn-dependent oxidoreductase | - |
| LC440_RS10160 (2095071) | 2095071..2096228 | - | 1158 | Protein_1982 | hypothetical protein ; Integrase | Integrase |
| LC440_RS10165 (2096242) | 2096242..2096937 | - | 696 | Protein_1983 | IS3 family transposase IS2 | Transposase |
| LC440_RS10170 (2096934) | 2096934..2097701 | - | 768 | Protein_1984 | exonuclease | - |
| LC440_RS10175 (2097794) | 2097794..2097985 | - | 192 | WP_001083297.1 | lysis protein YdfD | - |
| LC440_RS10180 (2097982) | 2097982..2098170 | - | 189 | WP_000854559.1 | cell division inhibition protein DicB | - |
| LC440_RS10185 (2098738) | 2098738..2098956 | - | 219 | WP_001171942.1 | protein YdfC | - |
| LC440_RS24850 (2098986) | 2098986..2099114 | - | 129 | WP_000344964.1 | protein YdfB | - |
| LC440_RS10190 (2099116) | 2099116..2099271 | - | 156 | WP_000379575.1 | DUF1391 family protein | - |
| LC440_RS10195 (2099438) | 2099438..2099845 | - | 408 | WP_000448564.1 | DNA-binding transcriptional dual regulator DicA | - |
| LC440_RS10200 (2099929) | 2099929..2100159 | + | 231 | WP_000920568.1 | dicB transcriptional regulator DicC | - |
| LC440_RS10205 (2100143) | 2100143..2100421 | + | 279 | Protein_1992 | hypothetical protein | - |
| LC440_RS10210 (2100456) | 2100456..2100605 | + | 150 | WP_011443592.1 | protein YdfW | - |
| LC440_RS10215 (2101042) | 2101042..2101374 | - | 333 | WP_001301033.1 | FlxA-like family protein | - |
| LC440_RS10220 (2101577) | 2101577..2101882 | - | 306 | WP_001326990.1 | protein YdfV | - |
| LC440_RS10225 (2101907) | 2101907..2102146 | + | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| LC440_RS10230 (2102146) | 2102146..2102433 | + | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| LC440_RS10235 (2102505) | 2102505..2102660 | + | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| LC440_RS10240 (2102877) | 2102877..2103128 | + | 252 | WP_000980994.1 | protein Rem | - |
| LC440_RS10245 (2103195) | 2103195..2103473 | + | 279 | WP_012304870.1 | hypothetical protein | - |
| LC440_RS10250 (2103475) | 2103475..2104524 | + | 1050 | WP_001265198.1 | DUF968 domain-containing protein | - |
| LC440_RS10255 (2104538) | 2104538..2105290 | + | 753 | WP_001047135.1 | antitermination protein | - |
| LC440_RS10260 (2105568) | 2105568..2105657 | - | 90 | WP_120795389.1 | hypothetical protein | - |
| LC440_RS10265 (2105712) | 2105712..2105924 | - | 213 | WP_000087756.1 | cold shock-like protein CspF | - |
| LC440_RS10270 (2106225) | 2106225..2106440 | + | 216 | WP_000066484.1 | cold shock-like protein CspB | - |
| LC440_RS10275 (2106804) | 2106804..2106974 | - | 171 | WP_211180497.1 | putative zinc-binding protein YnfU | - |
| LC440_RS10280 (2107194) | 2107194..2107409 | + | 216 | WP_000839590.1 | phage lysis protein EssD | - |
| LC440_RS10285 (2107414) | 2107414..2107725 | + | 312 | WP_000189916.1 | YdfR family protein | - |
| LC440_RS10290 (2107722) | 2107722..2108255 | + | 534 | WP_001092971.1 | lysozyme | - |
| LC440_RS10295 (2108252) | 2108252..2108749 | + | 498 | WP_001071769.1 | DUF2514 domain-containing protein | - |
| LC440_RS10300 (2109112) | 2109112..2109324 | + | 213 | WP_000066495.1 | cold shock protein CspI | - |
| LC440_RS10305 (2109335) | 2109335..2109523 | + | 189 | WP_071524604.1 | cold-shock protein | - |
| LC440_RS10310 (2109526) | 2109526..2109591 | + | 66 | WP_120795388.1 | small protein YnfR | - |
| LC440_RS10315 (2109670) | 2109670..2109825 | + | 156 | WP_001309517.1 | protein YnfN | - |
| LC440_RS10320 (2109997) | 2109997..2110170 | + | 174 | WP_001019606.1 | addiction module toxin, GnsA/GnsB family | - |
| LC440_RS10325 (2110322) | 2110322..2110732 | - | 411 | WP_000373090.1 | DUF1398 domain-containing protein | - |
| LC440_RS10330 (2110790) | 2110790..2111023 | - | 234 | WP_001368374.1 | YlcI/YnfO family protein | - |
| LC440_RS10335 (2111412) | 2111412..2111981 | + | 570 | WP_000453612.1 | DNA-packaging protein | - |
| LC440_RS10340 (2111932) | 2111932..2112894 | + | 963 | WP_001027733.1 | phage tail protein | - |
| LC440_RS10345 (2112894) | 2112894..2113469 | + | 576 | WP_001698950.1 | tail fiber assembly protein | - |
| LC440_RS10350 (2113567) | 2113567..2114157 | - | 591 | WP_000086525.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| LC440_RS10355 (2114474) | 2114474..2114707 | - | 234 | WP_000836768.1 | cold shock protein YdfK | - |
| LC440_RS10360 (2114776) | 2114776..2114889 | - | 114 | WP_120795384.1 | YnaM/YnfT family protein | - |
| LC440_RS10365 (2115410) | 2115410..2116777 | + | 1368 | Protein_2024 | MHS family MFS transporter | - |
| LC440_RS10370 (2116866) | 2116866..2118326 | + | 1461 | WP_000527743.1 | mannitol dehydrogenase family protein | - |
| LC440_RS10375 (2118361) | 2118361..2118564 | - | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| LC440_RS10380 (2118741) | 2118741..2119427 | - | 687 | WP_000215549.1 | DNA-binding transcriptional regulator rspR | - |
| LC440_RS10385 (2119516) | 2119516..2120262 | - | 747 | WP_000636571.1 | hypothetical protein | VF |
| LC440_RS10390 (2120399) | 2120399..2122444 | + | 2046 | WP_000210373.1 | peptidyl-dipeptidase Dcp | - |
| LC440_RS10395 (2122488) | 2122488..2123006 | - | 519 | WP_001024746.1 | 2-oxo-tetronate isomerase | - |
| LC440_RS10400 (2123282) | 2123282..2123674 | + | 393 | WP_000671737.1 | YdeI family stress tolerance OB fold protein | - |
| LC440_RS10405 (2123929) | 2123929..2124819 | + | 891 | WP_000592814.1 | diguanylate cyclase DgcZ | - |
| LC440_RS10410 (2124934) | 2124934..2125038 | - | 105 | WP_211180496.1 | protein MgtT | - |
| LC440_RS10415 (2125038) | 2125038..2125133 | - | 96 | WP_000901367.1 | protein MgtS | - |
| LC440_RS10420 (2125260) | 2125260..2126447 | - | 1188 | WP_001054204.1 | efflux MFS transporter YdeE | - |
| LC440_RS10425 (2126642) | 2126642..2127541 | + | 900 | WP_000087187.1 | O-acetylserine/cysteine exporter | - |
| LC440_RS10430 (2127572) | 2127572..2127790 | - | 219 | WP_000803657.1 | multiple antibiotic resistance protein MarB | - |
| LC440_RS10435 (2127822) | 2127822..2128205 | - | 384 | WP_000091199.1 | hypothetical protein | VF |
| LC440_RS10440 (2128225) | 2128225..2128659 | - | 435 | WP_000843414.1 | multiple antibiotic resistance transcriptional regulator MarR | - |
| LC440_RS10445 (2128871) | 2128871..2129536 | + | 666 | WP_000885033.1 | NAAT family transporter MarC | - |
| LC440_RS10450 (2129561) | 2129561..2130751 | - | 1191 | WP_000210799.1 | L-arabinose MFS transporter | - |
| LC440_RS10455 (2130901) | 2130901..2132016 | - | 1116 | WP_000258599.1 | putative protein YneK | - |
| LC440_RS10460 (2132094) | 2132094..2132975 | - | 882 | WP_000366501.1 | hypothetical protein | VF |
| LC440_RS10465 (2133076) | 2133076..2134464 | + | 1389 | WP_000156615.1 | succinate-semialdehyde dehydrogenase | - |
| LC440_RS10470 (2134528) | 2134528..2135454 | + | 927 | WP_000257409.1 | glutaminase B | - |
| LC440_RS10475 (2135454) | 2135454..2135813 | + | 360 | WP_001191027.1 | DUF4186 domain-containing protein | - |
| LC440_RS10480 (2135886) | 2135886..2136872 | + | 987 | Protein_2047 | GGDEF domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|