MGE detailed information
MGE type: Genomic_island MGE length: 23339 bp
Accession: NZ_CP084023 Location: 4308470..4331808 Organism: Pectobacterium aroidearum strain LJ2 Replicon: chromosome
Accession: NZ_CP084023 Location: 4308470..4331808 Organism: Pectobacterium aroidearum strain LJ2 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LCF43_RS19385 | 4303826..4304947 | - | 1122 | WP_181829922.1 | cupin domain-containing protein | - |
| LCF43_RS19390 | 4305038..4305466 | - | 429 | WP_181847116.1 | GNAT family N-acetyltransferase | - |
| LCF43_RS19395 | 4305609..4309156 | - | 3548 | Protein_3793 | AAA domain-containing protein | - |
| LCF43_RS19400 | 4309437..4310804 | - | 1368 | WP_225181576.1 | McrC family protein | - |
| LCF43_RS19405 | 4310801..4312393 | - | 1593 | WP_225181577.1 | AAA family ATPase | - |
| LCF43_RS19410 | 4312549..4315797 | - | 3249 | WP_225181578.1 | DEAD/DEAH box helicase family protein | - |
| LCF43_RS19415 | 4315794..4317104 | - | 1311 | WP_225181579.1 | restriction endonuclease subunit S | - |
| LCF43_RS19420 | 4317104..4319467 | - | 2364 | WP_225181580.1 | class I SAM-dependent DNA methyltransferase | - |
| LCF43_RS19425 | 4320012..4321859 | + | 1848 | WP_225181581.1 | P-loop NTPase fold protein | - |
| LCF43_RS19430 | 4321862..4322722 | + | 861 | WP_225181582.1 | hypothetical protein | - |
| LCF43_RS19435 | 4322719..4324002 | + | 1284 | WP_225181583.1 | 7-cyano-7-deazaguanine synthase | - |
| LCF43_RS19440 | 4324099..4324422 | - | 324 | WP_225181584.1 | DNA-binding transcriptional regulator | - |
| LCF43_RS19445 | 4324406..4324765 | - | 360 | WP_225181585.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| LCF43_RS19450 | 4325787..4326665 | + | 879 | WP_225181586.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| LCF43_RS19455 | 4326668..4326868 | + | 201 | WP_014698606.1 | AlpA family transcriptional regulator | - |
| LCF43_RS19460 | 4326865..4327401 | + | 537 | WP_225181587.1 | ash family protein | - |
| LCF43_RS19465 | 4327394..4328230 | + | 837 | Protein_3807 | toprim domain-containing protein | - |
| LCF43_RS19470 | 4328342..4329430 | + | 1089 | WP_225182648.1 | helicase RepA family protein | - |
| LCF43_RS19475 | 4329706..4331040 | - | 1335 | WP_181846230.1 | type II toxin-antitoxin system HipA family toxin | Toxin Detail |
| LCF43_RS19480 | 4331045..4331350 | - | 306 | WP_181846231.1 | helix-turn-helix transcriptional regulator | Antitoxin Detail |
| LCF43_RS19485 | 4331495..4331701 | + | 207 | WP_225181588.1 | hypothetical protein | - |
| LCF43_RS19490 | 4331827..4333083 | - | 1257 | WP_225181589.1 | tyrosine-type recombinase/integrase | - |
| LCF43_RS19500 | 4333617..4334693 | - | 1077 | WP_181829931.1 | LPS export ABC transporter permease LptG | - |
| LCF43_RS19505 | 4334693..4335808 | - | 1116 | WP_181829932.1 | LPS export ABC transporter permease LptF | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|