MGE detailed information
MGE type: IS/Tn MGE length: 1194 bp
Accession: NZ_CP084023 Location: 3572453..3573646 Organism: Pectobacterium aroidearum strain LJ2 Replicon: chromosome
Accession: NZ_CP084023 Location: 3572453..3573646 Organism: Pectobacterium aroidearum strain LJ2 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LCF43_RS16220 | 3568035..3569228 | + | 1194 | WP_225181328.1 | efflux RND transporter periplasmic adaptor subunit | - |
| LCF43_RS16225 | 3569257..3572385 | + | 3129 | WP_015839362.1 | efflux RND transporter permease subunit | - |
| LCF43_RS16230 | 3572453..3573646 | - | 1194 | WP_181848129.1 | IS4 family transposase ISSfl1 | Transposase |
| LCF43_RS16235 | 3573940..3574188 | + | 249 | WP_015839361.1 | type B 50S ribosomal protein L31 | - |
| LCF43_RS16240 | 3574206..3574349 | + | 144 | WP_005976091.1 | type B 50S ribosomal protein L36 | - |
| LCF43_RS16245 | 3574946..3575314 | + | 369 | WP_005976089.1 | Hha toxicity modulator TomB | Antitoxin Detail |
| LCF43_RS16250 | 3575368..3575571 | + | 204 | WP_005976087.1 | HHA domain-containing protein | Toxin Detail |
| LCF43_RS16260 | 3576318..3576638 | + | 321 | WP_015839360.1 | MGMT family protein | - |
| LCF43_RS16265 | 3576658..3577239 | - | 582 | WP_225181329.1 | YbaY family lipoprotein | - |
| LCF43_RS16270 | 3577452..3578315 | + | 864 | WP_225181330.1 | acyl-CoA thioesterase II | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|