MGE detailed information
MGE type: Genomic_island MGE length: 28336 bp
Accession: NZ_CP084023 Location: 1543622..1571957 Organism: Pectobacterium aroidearum strain LJ2 Replicon: chromosome
Accession: NZ_CP084023 Location: 1543622..1571957 Organism: Pectobacterium aroidearum strain LJ2 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LCF43_RS06965 | 1539205..1540221 | - | 1017 | WP_015841098.1 | iron ABC transporter substrate-binding protein | - |
| LCF43_RS06970 | 1540720..1541043 | + | 324 | WP_015841097.1 | PTS lactose/cellobiose transporter subunit IIA | - |
| LCF43_RS06975 | 1541159..1541632 | - | 474 | WP_182099819.1 | cupin domain-containing protein | - |
| LCF43_RS06980 | 1541903..1542796 | + | 894 | WP_181829052.1 | LysR family transcriptional regulator | - |
| LCF43_RS06985 | 1542841..1543227 | + | 387 | WP_225182222.1 | hypothetical protein | - |
| LCF43_RS06990 | 1544503..1545639 | + | 1137 | WP_180779727.1 | D-alanyl-lipoteichoic acid biosynthesis protein DltD | - |
| LCF43_RS06995 | 1545769..1546887 | + | 1119 | WP_180779769.1 | Peptidoglycan O-acetyltransferase | VF |
| LCF43_RS07000 | 1546884..1548317 | + | 1434 | WP_180779726.1 | D-alanine--D-alanyl carrier protein ligase | VF |
| LCF43_RS07005 | 1548334..1548555 | + | 222 | WP_010300175.1 | acyl carrier protein | - |
| LCF43_RS07010 | 1548788..1549666 | + | 879 | WP_181848598.1 | (S)-phenoxypropionate/alpha-ketoglutarate- dioxygenase | VF |
| LCF43_RS07015 | 1549663..1551096 | + | 1434 | WP_225182223.1 | FAD-binding protein | - |
| LCF43_RS07020 | 1551791..1552276 | + | 486 | WP_014699424.1 | Major exported protein | VF |
| LCF43_RS07025 | 1552434..1552631 | + | 198 | WP_225182224.1 | hypothetical protein | - |
| LCF43_RS07030 | 1552719..1553351 | - | 633 | WP_225182225.1 | hypothetical protein | - |
| LCF43_RS07035 | 1553487..1554053 | - | 567 | Protein_1366 | integrase arm-type DNA-binding domain-containing protein | - |
| LCF43_RS07040 | 1554744..1555577 | - | 834 | WP_225182591.1 | DUF4942 domain-containing protein | - |
| LCF43_RS07045 | 1555688..1556008 | - | 321 | WP_225182226.1 | TA system toxin CbtA family protein | Toxin Detail |
| LCF43_RS07050 | 1556078..1556413 | - | 336 | WP_225182227.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| LCF43_RS07055 | 1556453..1556926 | - | 474 | WP_225182228.1 | DNA repair protein RadC | - |
| LCF43_RS07060 | 1557054..1557404 | - | 351 | WP_039345641.1 | hypothetical protein | - |
| LCF43_RS07065 | 1557461..1558294 | - | 834 | WP_225182229.1 | hypothetical protein | - |
| LCF43_RS07070 | 1558441..1558599 | - | 159 | WP_154715508.1 | hypothetical protein | - |
| LCF43_RS07075 | 1558785..1559672 | - | 888 | WP_225182230.1 | 50S ribosome-binding GTPase | - |
| LCF43_RS07080 | 1559781..1560725 | - | 945 | WP_225182231.1 | hypothetical protein | - |
| LCF43_RS07085 | 1561357..1561947 | + | 591 | WP_048257525.1 | inovirus-type Gp2 protein | - |
| LCF43_RS07090 | 1562052..1562264 | + | 213 | WP_137742052.1 | AlpA family phage regulatory protein | - |
| LCF43_RS07095 | 1562357..1562779 | + | 423 | WP_225182232.1 | zinc-ribbon domain-containing protein | - |
| LCF43_RS07100 | 1562934..1563515 | + | 582 | WP_225182233.1 | hypothetical protein | - |
| LCF43_RS07105 | 1563778..1565232 | + | 1455 | WP_225182234.1 | Flagellin | VF |
| LCF43_RS07110 | 1565284..1565829 | + | 546 | WP_225182235.1 | LuxR C-terminal-related transcriptional regulator | - |
| LCF43_RS07115 | 1565917..1566393 | + | 477 | Protein_1382 | restriction endonuclease | - |
| LCF43_RS07120 | 1566726..1568144 | + | 1419 | WP_225182236.1 | hypothetical protein | - |
| LCF43_RS07125 | 1568147..1568587 | + | 441 | WP_225182237.1 | hypothetical protein | - |
| LCF43_RS07130 | 1568618..1570762 | - | 2145 | WP_225182238.1 | DUF1156 domain-containing protein | - |
| LCF43_RS07135 | 1570746..1571957 | - | 1212 | WP_225182239.1 | N-6 DNA methylase | - |
| LCF43_RS07145 | 1572457..1573671 | - | 1215 | WP_225182241.1 | tyrosine-type recombinase/integrase | - |
| LCF43_RS07155 | 1574357..1576804 | + | 2448 | WP_181829041.1 | DUF3772 domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|