MGE detailed information
MGE type: Prophage MGE length: 27040 bp
Accession: NZ_CP084008 Location: 852289..879328 Organism: Staphylococcus epidermidis strain NBRC 113846 Replicon: chromosome
Accession: NZ_CP084008 Location: 852289..879328 Organism: Staphylococcus epidermidis strain NBRC 113846 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LCR03_RS03840 (LCR03_03840) | 847327..848844 | + | 1518 | WP_001829591.1 | 2,3-bisphosphoglycerate-independent phosphoglycerate mutase | - |
| LCR03_RS03845 (LCR03_03845) | 848983..850287 | + | 1305 | WP_001829595.1 | phosphopyruvate hydratase | - |
| LCR03_RS03850 (LCR03_03850) | 850453..850911 | + | 459 | WP_001829646.1 | hypothetical protein | - |
| LCR03_RS03855 (LCR03_03855) | 850980..851213 | + | 234 | WP_001829669.1 | preprotein translocase subunit SecG | - |
| LCR03_RS03860 (LCR03_03860) | 851514..852254 | + | 741 | WP_001829672.1 | carboxylesterase | - |
| LCR03_RS03865 (LCR03_03865) | 852289..854667 | + | 2379 | WP_002487888.1 | ribonuclease R | - |
| LCR03_RS03870 (LCR03_03870) | 854692..855162 | + | 471 | WP_001829588.1 | SsrA-binding protein SmpB | - |
| LCR03_RS03880 (LCR03_03880) | 855741..856369 | - | 629 | Protein_750 | Tyrosine recombinase XerD ; Integrase | Integrase |
| LCR03_RS03885 (LCR03_03885) | 856335..856514 | + | 180 | WP_001829655.1 | hypothetical protein | - |
| LCR03_RS03890 (LCR03_03890) | 856658..857200 | - | 543 | WP_001832592.1 | hypothetical protein | - |
| LCR03_RS03895 (LCR03_03895) | 857935..858105 | + | 171 | WP_001829642.1 | hypothetical protein | - |
| LCR03_RS03900 (LCR03_03900) | 858363..858596 | - | 234 | WP_001829658.1 | hypothetical protein | - |
| LCR03_RS03905 (LCR03_03905) | 859209..860516 | - | 1308 | WP_001832616.1 | potassium transporter TrkG | - |
| LCR03_RS03910 (LCR03_03910) | 860743..861087 | + | 345 | WP_001832602.1 | DUF4260 domain-containing protein | - |
| LCR03_RS03915 (LCR03_03915) | 861307..861723 | - | 417 | WP_002468671.1 | VOC family protein | - |
| LCR03_RS03920 (LCR03_03920) | 863216..863719 | - | 504 | WP_002438954.1 | DUF1440 domain-containing protein | - |
| LCR03_RS03925 (LCR03_03925) | 864006..864947 | + | 942 | WP_001829688.1 | cation diffusion facilitator family transporter | - |
| LCR03_RS03935 (LCR03_03935) | 866313..866513 | + | 201 | WP_001829681.1 | cold-shock protein | - |
| LCR03_RS03940 (LCR03_03940) | 867134..867358 | - | 225 | WP_001829613.1 | hypothetical protein | - |
| LCR03_RS03945 (LCR03_03945) | 867382..867666 | - | 285 | WP_001829635.1 | hypothetical protein | - |
| LCR03_RS03950 (LCR03_03950) | 867765..868511 | - | 747 | WP_002438959.1 | poly-gamma-glutamate hydrolase family protein | - |
| LCR03_RS03955 (LCR03_03955) | 868795..869028 | + | 234 | WP_001829664.1 | hypothetical protein | - |
| LCR03_RS03960 (LCR03_03960) | 869088..869642 | - | 555 | WP_002469327.1 | lipoprotein N-acylation protein LnsA | - |
| LCR03_RS03965 (LCR03_03965) | 869832..870020 | - | 189 | WP_001829569.1 | hypothetical protein | Toxin Detail |
| LCR03_RS03970 (LCR03_03970) | 870045..870302 | - | 258 | WP_002438963.1 | hypothetical protein | Antitoxin Detail |
| LCR03_RS03975 (LCR03_03975) | 870710..870913 | + | 204 | WP_002438966.1 | sterile alpha motif-like domain-containing protein | - |
| LCR03_RS03980 (LCR03_03980) | 870905..871141 | - | 237 | WP_002457224.1 | hypothetical protein | - |
| LCR03_RS03985 (LCR03_03985) | 871355..871942 | + | 588 | WP_002469329.1 | histidine phosphatase family protein | - |
| LCR03_RS03990 (LCR03_03990) | 872213..872713 | - | 501 | WP_001829623.1 | GNAT family N-acetyltransferase | - |
| LCR03_RS03995 (LCR03_03995) | 873099..873286 | + | 188 | Protein_772 | hypothetical protein | - |
| LCR03_RS04000 (LCR03_04000) | 873316..873453 | + | 138 | WP_162161215.1 | IS1182 family transposase IS1272 | Transposase |
| LCR03_RS04005 (LCR03_04005) | 873637..874059 | - | 423 | WP_002457221.1 | organic hydroperoxide resistance protein | - |
| LCR03_RS04010 (LCR03_04010) | 874220..874936 | + | 717 | WP_001831974.1 | type I 3-dehydroquinate dehydratase | - |
| LCR03_RS04015 (LCR03_04015) | 875017..875559 | + | 543 | WP_001831981.1 | nitroreductase | - |
| LCR03_RS04020 (LCR03_04020) | 875742..876065 | - | 324 | WP_001831907.1 | thioredoxin family protein | - |
| LCR03_RS04025 (LCR03_04025) | 876208..876561 | + | 354 | WP_001831965.1 | arsenate reductase family protein | - |
| LCR03_RS04030 (LCR03_04030) | 876735..877115 | + | 381 | WP_002438979.1 | glycine cleavage system protein GcvH | - |
| LCR03_RS04035 (LCR03_04035) | 877375..877761 | + | 387 | WP_001831968.1 | toprim domain-containing protein | - |
| LCR03_RS04040 (LCR03_04040) | 877754..878050 | + | 297 | WP_001831936.1 | thioredoxin family protein | - |
| LCR03_RS04045 (LCR03_04045) | 878303..879328 | + | 1026 | WP_001831992.1 | Vitamin B12 import ATP-binding protein BtuD | VF |
| LCR03_RS04050 (LCR03_04050) | 879321..880016 | + | 696 | WP_001831910.1 | methionine ABC transporter permease | - |
| LCR03_RS04055 (LCR03_04055) | 880037..880849 | + | 813 | WP_002456942.1 | MetQ/NlpA family ABC transporter substrate-binding protein | - |
| LCR03_RS04060 (LCR03_04060) | 881119..881277 | - | 159 | WP_001831893.1 | hypothetical protein | - |
| LCR03_RS04065 (LCR03_04065) | 881452..881643 | + | 192 | WP_001831967.1 | CsbD family protein | - |
| LCR03_RS04070 (LCR03_04070) | 881709..882569 | - | 861 | WP_001831939.1 | DUF368 domain-containing protein | - |
| LCR03_RS04075 (LCR03_04075) | 882891..883652 | + | 762 | WP_001831944.1 | Fe-S cluster assembly ATPase SufC | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|