MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 50447 bp
Accession: NZ_CP083882 Location: 1..50447 Organism: Escherichia coli strain NDM3 Replicon: plasmid unnamed2
Accession: NZ_CP083882 Location: 1..50447 Organism: Escherichia coli strain NDM3 Replicon: plasmid unnamed2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LCE26_RS23820 (LCE26_23820) | 689..961 | + | 273 | WP_224435176.1 | hypothetical protein | - |
| LCE26_RS23825 (LCE26_23825) | 1098..1671 | + | 574 | Protein_1 | conjugal transfer protein TrbI | - |
| LCE26_RS23830 (LCE26_23830) | 1673..2692 | + | 1020 | Protein_2 | P-type DNA transfer ATPase VirB11 | - |
| LCE26_RS23835 (LCE26_23835) | 2679..2828 | + | 150 | WP_224435177.1 | hypothetical protein | - |
| LCE26_RS23840 (LCE26_23840) | 2839..3600 | + | 762 | WP_224435178.1 | Conjugal transfer protein TraG | VF |
| LCE26_RS23845 (LCE26_23845) | 3597..4397 | + | 801 | WP_224435179.1 | type IV secretory system conjugative DNA transfer family protein | - |
| LCE26_RS23850 (LCE26_23850) | 4549..4971 | + | 423 | WP_032150585.1 | cag pathogenicity island Cag12 family protein | - |
| LCE26_RS23855 (LCE26_23855) | 4955..5260 | + | 306 | WP_000147044.1 | TrbM/KikA/MpfK family conjugal transfer protein | - |
| LCE26_RS23860 (LCE26_23860) | 5266..5520 | + | 255 | WP_000415096.1 | hypothetical protein | - |
| LCE26_RS23865 (LCE26_23865) | 5623..5931 | + | 309 | WP_000647576.1 | hypothetical protein | - |
| LCE26_RS23870 (LCE26_23870) | 5928..6424 | + | 497 | Protein_10 | thermonuclease family protein | - |
| LCE26_RS23875 (LCE26_23875) | 6440..6844 | + | 405 | WP_001218543.1 | hypothetical protein | - |
| LCE26_RS23880 (LCE26_23880) | 6950..7525 | + | 576 | WP_001199074.1 | hypothetical protein | - |
| LCE26_RS23885 (LCE26_23885) | 7530..9682 | + | 2153 | Protein_13 | DNA topoisomerase 3 | - |
| LCE26_RS23890 (LCE26_23890) | 9679..9885 | + | 207 | WP_000850859.1 | hemolysin expression modulator Hha | - |
| LCE26_RS23895 (LCE26_23895) | 9901..10365 | + | 465 | WP_001541969.1 | H-NS family nucleoid-associated regulatory protein | - |
| LCE26_RS23900 (LCE26_23900) | 10469..11125 | + | 657 | WP_000972912.1 | hypothetical protein | - |
| LCE26_RS23905 (LCE26_23905) | 11145..11393 | + | 249 | WP_162750069.1 | hypothetical protein | - |
| LCE26_RS23910 (LCE26_23910) | 11730..12545 | + | 816 | WP_001541970.1 | Tyrosine recombinase XerD | VF |
| LCE26_RS23915 (LCE26_23915) | 12660..13319 | + | 660 | WP_000516223.1 | hypothetical protein | VF |
| LCE26_RS23920 (LCE26_23920) | 13412..13714 | + | 303 | WP_001096507.1 | hypothetical protein | - |
| LCE26_RS23925 (LCE26_23925) | 13751..13978 | + | 228 | WP_001541971.1 | hypothetical protein | - |
| LCE26_RS23930 (LCE26_23930) | 14610..15137 | - | 528 | WP_001541972.1 | DUF2726 domain-containing protein | - |
| LCE26_RS23935 (LCE26_23935) | 15273..15677 | - | 405 | WP_001541973.1 | hypothetical protein | - |
| LCE26_RS23940 (LCE26_23940) | 15743..16750 | - | 1008 | WP_000243324.1 | replication initiation protein | - |
| LCE26_RS23945 (LCE26_23945) | 18293..18622 | + | 330 | WP_001541974.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| LCE26_RS23950 (LCE26_23950) | 18603..18884 | + | 282 | WP_000780222.1 | helix-turn-helix transcriptional regulator | - |
| LCE26_RS23955 (LCE26_23955) | 18899..19225 | + | 327 | WP_001541975.1 | hypothetical protein | - |
| LCE26_RS23960 (LCE26_23960) | 19865..20380 | + | 516 | WP_001025395.1 | J domain-containing protein | - |
| LCE26_RS23965 (LCE26_23965) | 20485..21027 | + | 543 | WP_001083906.1 | hypothetical protein | - |
| LCE26_RS23970 (LCE26_23970) | 21024..21275 | + | 252 | WP_001230707.1 | hypothetical protein | Toxin Detail |
| LCE26_RS23975 (LCE26_23975) | 21262..21489 | + | 228 | WP_001541977.1 | hypothetical protein | Antitoxin Detail |
| LCE26_RS23980 (LCE26_23980) | 21943..22242 | + | 300 | WP_001541978.1 | hypothetical protein | - |
| LCE26_RS23985 (LCE26_23985) | 22335..22685 | + | 351 | WP_001541979.1 | hypothetical protein | - |
| LCE26_RS23990 (LCE26_23990) | 22959..23132 | + | 174 | WP_071821486.1 | type II toxin-antitoxin system HicB family antitoxin | - |
| LCE26_RS23995 (LCE26_23995) | 23496..23999 | + | 504 | WP_024190319.1 | DNA distortion polypeptide 1 | - |
| LCE26_RS24000 (LCE26_24000) | 24003..25232 | + | 1230 | WP_001541982.1 | hypothetical protein | Relaxase |
| LCE26_RS24005 (LCE26_24005) | 25309..25602 | + | 294 | WP_000134733.1 | sigma factor-like helix-turn-helix DNA-binding protein | - |
| LCE26_RS24010 (LCE26_24010) | 25599..25814 | + | 216 | WP_000760375.1 | EexN family lipoprotein | - |
| LCE26_RS24015 (LCE26_24015) | 25991..26167 | + | 177 | WP_000660496.1 | hypothetical protein | - |
| LCE26_RS24020 (LCE26_24020) | 26170..26790 | + | 621 | WP_000157548.1 | Type IV secretion system protein virB1 | VF |
| LCE26_RS24025 (LCE26_24025) | 26804..27130 | + | 327 | WP_000008647.1 | Type IV secretion system protein virB2 | VF |
| LCE26_RS24030 (LCE26_24030) | 27149..29896 | + | 2748 | WP_001541983.1 | Type IV secretion system protein virB4 | VF |
| LCE26_RS24035 (LCE26_24035) | 29908..30624 | + | 717 | WP_001541984.1 | type IV secretion system protein | - |
| LCE26_RS24040 (LCE26_24040) | 30636..31730 | + | 1095 | WP_000046889.1 | type IV secretion system protein | - |
| LCE26_RS24045 (LCE26_24045) | 32245..32931 | + | 687 | WP_001401676.1 | Type IV secretion system protein virB8 | VF |
| LCE26_RS24050 (LCE26_24050) | 32928..33836 | + | 909 | WP_001353735.1 | Type IV secretion system protein virB9 | VF |
| LCE26_RS24055 (LCE26_24055) | 33829..34947 | + | 1119 | WP_000131271.1 | Type IV secretion system protein virB10 | VF |
| LCE26_RS24060 (LCE26_24060) | 34949..35977 | + | 1029 | WP_001014667.1 | Type IV secretion system protein VirB11 | VF |
| LCE26_RS24065 (LCE26_24065) | 36414..37825 | + | 1412 | Protein_49 | type IV secretory system conjugative DNA transfer family protein | - |
| LCE26_RS24070 (LCE26_24070) | 37834..38256 | + | 423 | WP_032150585.1 | cag pathogenicity island Cag12 family protein | - |
| LCE26_RS24075 (LCE26_24075) | 38240..38545 | + | 306 | WP_000147044.1 | TrbM/KikA/MpfK family conjugal transfer protein | - |
| LCE26_RS24080 (LCE26_24080) | 38551..38805 | + | 255 | WP_000415096.1 | hypothetical protein | - |
| LCE26_RS24085 (LCE26_24085) | 38908..39216 | + | 309 | WP_000647576.1 | hypothetical protein | - |
| LCE26_RS24090 (LCE26_24090) | 39213..39707 | + | 495 | WP_001215680.1 | thermonuclease family protein | - |
| LCE26_RS24095 (LCE26_24095) | 39723..40202 | + | 480 | WP_224435173.1 | hypothetical protein | - |
| LCE26_RS24100 (LCE26_24100) | 40235..40810 | + | 576 | WP_001199074.1 | hypothetical protein | - |
| LCE26_RS24105 (LCE26_24105) | 40815..42968 | + | 2154 | WP_001235750.1 | type IA DNA topoisomerase | - |
| LCE26_RS24110 (LCE26_24110) | 42965..43171 | + | 207 | WP_000850859.1 | hemolysin expression modulator Hha | - |
| LCE26_RS24115 (LCE26_24115) | 43187..43651 | + | 465 | WP_001541969.1 | H-NS family nucleoid-associated regulatory protein | - |
| LCE26_RS24120 (LCE26_24120) | 43755..44411 | + | 657 | WP_000972912.1 | hypothetical protein | - |
| LCE26_RS24125 (LCE26_24125) | 44431..44679 | + | 249 | WP_162750069.1 | hypothetical protein | - |
| LCE26_RS24130 (LCE26_24130) | 45019..45834 | + | 816 | WP_001541970.1 | Tyrosine recombinase XerD | VF |
| LCE26_RS24135 (LCE26_24135) | 45949..46607 | + | 659 | Protein_63 | peptidyl-arginine deiminase | - |
| LCE26_RS24140 (LCE26_24140) | 46700..47002 | + | 303 | WP_001096507.1 | hypothetical protein | - |
| LCE26_RS24145 (LCE26_24145) | 47039..47266 | + | 228 | WP_001541971.1 | hypothetical protein | - |
| LCE26_RS24150 (LCE26_24150) | 47898..48425 | - | 528 | WP_001541972.1 | DUF2726 domain-containing protein | - |
| LCE26_RS24155 (LCE26_24155) | 48539..48760 | - | 222 | WP_224435174.1 | hypothetical protein | - |
| LCE26_RS24160 (LCE26_24160) | 49028..49333 | - | 306 | WP_263483123.1 | replication initiation protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|