MGE detailed information
MGE type: Genomic_island MGE length: 11453 bp
Accession: NZ_CP083880 Location: 647138..658590 Organism: Escherichia coli strain NDM3 Replicon: chromosome
Accession: NZ_CP083880 Location: 647138..658590 Organism: Escherichia coli strain NDM3 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LCE26_RS03125 (642139) | 642139..642573 | - | 435 | WP_000948824.1 | PTS galactosamine/N-acetylgalactosamine transporter subunit IIA | - |
| LCE26_RS03130 (642591) | 642591..643469 | - | 879 | WP_001298314.1 | PTS N-acetylgalactosamine transporter subunit IID | - |
| LCE26_RS03135 (643459) | 643459..644238 | - | 780 | WP_000406214.1 | PTS N-acetylgalactosamine transporter subunit IIC | - |
| LCE26_RS03140 (644249) | 644249..644722 | - | 474 | WP_001295547.1 | PTS N-acetylgalactosamine transporter subunit IIB | - |
| LCE26_RS03145 (644745) | 644745..646025 | - | 1281 | WP_001521382.1 | tagatose-bisphosphate aldolase subunit KbaZ | - |
| LCE26_RS03150 (646274) | 646274..647083 | + | 810 | WP_000072171.1 | aga operon transcriptional regulator AgaR | - |
| LCE26_RS03155 (647138) | 647138..647602 | - | 465 | WP_000347272.1 | type II toxin-antitoxin system ribonuclease toxin YhaV | Toxin Detail |
| LCE26_RS03160 (647602) | 647602..647937 | - | 336 | WP_001307405.1 | type II toxin-antitoxin system antitoxin PrlF | Antitoxin Detail |
| LCE26_RS03165 (648086) | 648086..649657 | - | 1572 | WP_001273738.1 | galactarate dehydratase | - |
| LCE26_RS03170 (650032) | 650032..651366 | + | 1335 | WP_000599651.1 | galactarate/glucarate/glycerate transporter GarP | - |
| LCE26_RS03175 (651382) | 651382..652152 | + | 771 | WP_001058227.1 | 2-dehydro-3-deoxyglucarate aldolase | - |
| LCE26_RS03180 (652182) | 652182..653072 | + | 891 | WP_021523278.1 | 2-hydroxy-3-oxopropionate reductase | - |
| LCE26_RS03185 (653169) | 653169..654314 | + | 1146 | WP_001521378.1 | glycerate 2-kinase | - |
| LCE26_RS03195 (655114) | 655114..656301 | - | 1188 | WP_001521377.1 | YhaC family protein | - |
| LCE26_RS03200 (656323) | 656323..656862 | - | 540 | WP_000675749.1 | protein YhaB | - |
| LCE26_RS03205 (657118) | 657118..657336 | - | 219 | WP_171866797.1 | transcriptional activator TdcR | - |
| LCE26_RS03210 (657652) | 657652..658590 | + | 939 | WP_000104211.1 | transcriptional regulator TdcA | - |
| LCE26_RS03215 (658689) | 658689..659678 | + | 990 | WP_000548347.1 | bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB | - |
| LCE26_RS03220 (659700) | 659700..661031 | + | 1332 | WP_000107721.1 | threonine/serine transporter TdcC | - |
| LCE26_RS03225 (661057) | 661057..662265 | + | 1209 | WP_001297162.1 | propionate kinase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|