NZ_CP0838802317982..2330791

MGE detailed information

MGE type: Genomic_island        MGE length: 12810 bp
Accession: NZ_CP083880        Location: 2317982..2330791         Organism: Escherichia coli strain NDM3       Replicon: chromosome


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
LCE26_RS11205 (2317982) 2317982..2318248 + 267 WP_001301023.1 type II toxin-antitoxin system antitoxin HipB Antitoxin Detail
LCE26_RS11210 (2318248) 2318248..2319570 + 1323 WP_001125439.1 type II toxin-antitoxin system serine/threonine protein kinase toxin HipA Toxin Detail
LCE26_RS11215 (2319882) 2319882..2320090 + 209 Protein_2190 AraC family transcriptional regulator -
LCE26_RS11220 (2320345) 2320345..2321571 + 1227 Protein_2191 hypothetical protein VF
LCE26_RS11225 (2321585) 2321585..2322115 + 531 WP_000876763.1 hypothetical protein VF
LCE26_RS11230 (2322128) 2322128..2322631 + 504 WP_000825452.1 hypothetical protein VF
LCE26_RS11235 (2322690) 2322690..2323604 + 915 WP_000520662.1 hypothetical protein VF
LCE26_RS11240 (2323938) 2323938..2326217 + 2280 WP_000726691.1 acid resistance putative oxidoreductase YdeP -
LCE26_RS11245 (2326465) 2326465..2326662 + 198 WP_000543384.1 two-component system connector SafA -
LCE26_RS11250 (2326737) 2326737..2327498 + 762 WP_187765411.1 acid stress response transcriptional regulator YdeO -
LCE26_RS11255 (2327900) 2327900..2329582 + 1683 WP_001295684.1 sulfatase -
LCE26_RS11260 (2329634) 2329634..2330791 + 1158 WP_001301030.1 anaerobic sulfatase maturase -
LCE26_RS11265 (2330757) 2330757..2330879 - 123 WP_120795387.1 protein YneP -
LCE26_RS11270 (2331082) 2331082..2332767 + 1686 WP_000628576.1 ABC transporter ATP-binding protein/permease -
LCE26_RS11275 (2332805) 2332805..2335177 + 2373 WP_000832437.1 TonB-dependent receptor plug domain-containing protein -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance
Escherichia coli K-12 strain ER3413 Genomic island TA20025 CP009789 1561271..1572871 0.003
Escherichia coli str. K-12 substr. MC4100 Genomic island TA20066 HG738867 1469371..1480971 0.003
Escherichia coli str. K-12 substr. MG1655 Genomic island TA1040 NC_000913 1580842..1592442 0.003
Escherichia coli str. K-12 substr. W3110 Genomic island TA21437 NC_007779 1582556..1594156 0.003
Escherichia coli HS Genomic island TA22421 NC_009800 1597665..1609265 0.005
Escherichia coli str. K-12 substr. DH10B Genomic island TA22685 NC_010473 1669461..1680091 0.006
Escherichia coli BW2952 Genomic island TA23853 NC_012759 1470925..1482525 0.003
Escherichia coli DH1 Genomic island TA27403 NC_017638 1563024..1574624 0.003
Escherichia coli str. K-12 substr. MDS42 Genomic island TA29002 NC_020518 1287669..1299269 0.003
Escherichia coli BW25113 Genomic island TA48682 NZ_CP009273 1575099..1586699 0.003
Escherichia coli str. K-12 substr. W3110 strain K-12 substr. ZK126 Genomic island TA68424 NZ_CP017979 1484612..1496212 0.003
Escherichia coli strain DH5alpha Genomic island TA90478 NZ_CP025520 438284..449884 0.004
Escherichia coli str. K-12 substr. MC4100 strain K-12 Genomic island TA285016 NZ_HG738867 1469371..1480971 0.003