MGE detailed information
MGE type: Genomic_island MGE length: 11453 bp
Accession: NZ_CP083877 Location: 647137..658589 Organism: Escherichia coli strain NDM4 Replicon: chromosome
Accession: NZ_CP083877 Location: 647137..658589 Organism: Escherichia coli strain NDM4 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LCE22_RS03125 (642138) | 642138..642572 | - | 435 | WP_000948824.1 | PTS galactosamine/N-acetylgalactosamine transporter subunit IIA | - |
| LCE22_RS03130 (642590) | 642590..643468 | - | 879 | WP_001298314.1 | PTS N-acetylgalactosamine transporter subunit IID | - |
| LCE22_RS03135 (643458) | 643458..644237 | - | 780 | WP_000406214.1 | PTS N-acetylgalactosamine transporter subunit IIC | - |
| LCE22_RS03140 (644248) | 644248..644721 | - | 474 | WP_001295547.1 | PTS N-acetylgalactosamine transporter subunit IIB | - |
| LCE22_RS03145 (644744) | 644744..646024 | - | 1281 | WP_001521382.1 | tagatose-bisphosphate aldolase subunit KbaZ | - |
| LCE22_RS03150 (646273) | 646273..647082 | + | 810 | WP_000072171.1 | aga operon transcriptional regulator AgaR | - |
| LCE22_RS03155 (647137) | 647137..647601 | - | 465 | WP_000347272.1 | type II toxin-antitoxin system ribonuclease toxin YhaV | Toxin Detail |
| LCE22_RS03160 (647601) | 647601..647936 | - | 336 | WP_001307405.1 | type II toxin-antitoxin system antitoxin PrlF | Antitoxin Detail |
| LCE22_RS03165 (648085) | 648085..649656 | - | 1572 | WP_001273738.1 | galactarate dehydratase | - |
| LCE22_RS03170 (650031) | 650031..651365 | + | 1335 | WP_000599651.1 | galactarate/glucarate/glycerate transporter GarP | - |
| LCE22_RS03175 (651381) | 651381..652151 | + | 771 | WP_001058227.1 | 2-dehydro-3-deoxyglucarate aldolase | - |
| LCE22_RS03180 (652181) | 652181..653071 | + | 891 | WP_021523278.1 | 2-hydroxy-3-oxopropionate reductase | - |
| LCE22_RS03185 (653168) | 653168..654313 | + | 1146 | WP_001521378.1 | glycerate 2-kinase | - |
| LCE22_RS03195 (655113) | 655113..656300 | - | 1188 | WP_001521377.1 | YhaC family protein | - |
| LCE22_RS03200 (656322) | 656322..656861 | - | 540 | WP_000675749.1 | protein YhaB | - |
| LCE22_RS03205 (657117) | 657117..657335 | - | 219 | WP_171866797.1 | transcriptional activator TdcR | - |
| LCE22_RS03210 (657651) | 657651..658589 | + | 939 | WP_000104211.1 | transcriptional regulator TdcA | - |
| LCE22_RS03215 (658688) | 658688..659677 | + | 990 | WP_000548347.1 | bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB | - |
| LCE22_RS03220 (659699) | 659699..661030 | + | 1332 | WP_000107721.1 | threonine/serine transporter TdcC | - |
| LCE22_RS03225 (661056) | 661056..662264 | + | 1209 | WP_001297162.1 | propionate kinase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|