MGE detailed information
MGE type: Genomic_island MGE length: 11453 bp
Accession: NZ_CP083872 Location: 619691..631143 Organism: Escherichia coli strain NDM5 Replicon: chromosome
Accession: NZ_CP083872 Location: 619691..631143 Organism: Escherichia coli strain NDM5 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LCE27_RS03000 (614692) | 614692..615126 | - | 435 | WP_000948824.1 | PTS galactosamine/N-acetylgalactosamine transporter subunit IIA | - |
| LCE27_RS03005 (615144) | 615144..616022 | - | 879 | WP_001298314.1 | PTS N-acetylgalactosamine transporter subunit IID | - |
| LCE27_RS03010 (616012) | 616012..616791 | - | 780 | WP_000406214.1 | PTS N-acetylgalactosamine transporter subunit IIC | - |
| LCE27_RS03015 (616802) | 616802..617275 | - | 474 | WP_001295547.1 | PTS N-acetylgalactosamine transporter subunit IIB | - |
| LCE27_RS03020 (617298) | 617298..618578 | - | 1281 | WP_001521382.1 | tagatose-bisphosphate aldolase subunit KbaZ | - |
| LCE27_RS03025 (618827) | 618827..619636 | + | 810 | WP_000072171.1 | aga operon transcriptional regulator AgaR | - |
| LCE27_RS03030 (619691) | 619691..620155 | - | 465 | WP_000347272.1 | type II toxin-antitoxin system ribonuclease toxin YhaV | Toxin Detail |
| LCE27_RS03035 (620155) | 620155..620490 | - | 336 | WP_001307405.1 | type II toxin-antitoxin system antitoxin PrlF | Antitoxin Detail |
| LCE27_RS03040 (620639) | 620639..622210 | - | 1572 | WP_001273738.1 | galactarate dehydratase | - |
| LCE27_RS03045 (622585) | 622585..623919 | + | 1335 | WP_000599651.1 | galactarate/glucarate/glycerate transporter GarP | - |
| LCE27_RS03050 (623935) | 623935..624705 | + | 771 | WP_001058227.1 | 2-dehydro-3-deoxyglucarate aldolase | - |
| LCE27_RS03055 (624735) | 624735..625625 | + | 891 | WP_021523278.1 | 2-hydroxy-3-oxopropionate reductase | - |
| LCE27_RS03060 (625722) | 625722..626867 | + | 1146 | WP_001521378.1 | glycerate 2-kinase | - |
| LCE27_RS03070 (627667) | 627667..628854 | - | 1188 | WP_001521377.1 | YhaC family protein | - |
| LCE27_RS03075 (628876) | 628876..629415 | - | 540 | WP_000675749.1 | protein YhaB | - |
| LCE27_RS03080 (629671) | 629671..629889 | - | 219 | WP_171866797.1 | transcriptional activator TdcR | - |
| LCE27_RS03085 (630205) | 630205..631143 | + | 939 | WP_000104211.1 | transcriptional regulator TdcA | - |
| LCE27_RS03090 (631242) | 631242..632231 | + | 990 | WP_000548347.1 | bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB | - |
| LCE27_RS03095 (632253) | 632253..633584 | + | 1332 | WP_000107721.1 | threonine/serine transporter TdcC | - |
| LCE27_RS03100 (633610) | 633610..634818 | + | 1209 | WP_001297162.1 | propionate kinase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|