MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 98713 bp
Accession: NZ_CP083844 Location: 1..98713 Organism: Enterobacter asburiae strain 16773-yvys Replicon: plasmid p16773_2
Accession: NZ_CP083844 Location: 1..98713 Organism: Enterobacter asburiae strain 16773-yvys Replicon: plasmid p16773_2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LCD43_RS24445 (LCD43_24465) | 333..692 | - | 360 | WP_247952892.1 | cation efflux system protein CusF | - |
| LCD43_RS24450 (LCD43_24470) | 720..2105 | - | 1386 | WP_001507116.1 | Cation efflux system protein CusC | VF |
| LCD43_RS24455 (LCD43_24475) | 2295..2975 | + | 681 | WP_047064196.1 | Transcriptional regulatory protein CusR | VF |
| LCD43_RS24460 (LCD43_24480) | 2968..4443 | + | 1476 | WP_024562061.1 | copper/silver sensor histidine kinase SilS | - |
| LCD43_RS24465 (LCD43_24485) | 4694..5125 | + | 432 | WP_032433720.1 | silver-binding protein SilE | - |
| LCD43_RS24470 (LCD43_24490) | 5269..5619 | + | 351 | WP_000694953.1 | DUF305 domain-containing protein | - |
| LCD43_RS24475 (LCD43_24495) | 6007..6915 | - | 909 | WP_001372261.1 | HNH endonuclease | - |
| LCD43_RS24480 (LCD43_24500) | 7323..8291 | + | 969 | WP_074173274.1 | IS5 family transposase IS903B | Transposase |
| LCD43_RS24485 (LCD43_24505) | 8357..8643 | + | 287 | Protein_9 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| LCD43_RS24490 (LCD43_24510) | 9012..9752 | + | 741 | WP_045337421.1 | site-specific integrase | - |
| LCD43_RS24495 (LCD43_24515) | 10449..11459 | - | 1011 | WP_000200070.1 | RepB family plasmid replication initiator protein | - |
| LCD43_RS24500 (LCD43_24520) | 12200..13366 | + | 1167 | WP_000523812.1 | Sporulation initiation inhibitor protein Soj | VF |
| LCD43_RS24505 (LCD43_24525) | 13366..14337 | + | 972 | WP_000817038.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| LCD43_RS24510 (LCD43_24530) | 15156..15293 | - | 138 | WP_223861923.1 | hypothetical protein | - |
| LCD43_RS24515 (LCD43_24535) | 15418..16287 | - | 870 | WP_072057513.1 | IS5 family transposase IS903B | Transposase |
| LCD43_RS24520 (LCD43_24540) | 16419..16592 | + | 174 | Protein_16 | IS6 family transposase IS15DI | Transposase |
| LCD43_RS24525 (LCD43_24545) | 16645..17054 | - | 410 | Protein_17 | IS1 family transposase IS1X4 | Transposase |
| LCD43_RS24530 (LCD43_24550) | 17096..17623 | + | 528 | WP_071845418.1 | extracellular solute-binding protein | - |
| LCD43_RS24535 (LCD43_24555) | 17647..18171 | + | 525 | WP_003032103.1 | L-2-amino-thiazoline-4-carboxylic acid hydrolase | - |
| LCD43_RS24540 (LCD43_24560) | 18168..18416 | + | 249 | Protein_20 | VOC family protein | - |
| LCD43_RS24545 (LCD43_24565) | 18552..20579 | + | 2028 | WP_045358028.1 | class I SAM-dependent DNA methyltransferase | - |
| LCD43_RS24550 (LCD43_24570) | 20576..21883 | + | 1308 | WP_045337252.1 | restriction endonuclease subunit S | - |
| LCD43_RS24555 (LCD43_24575) | 21884..25141 | + | 3258 | WP_045337254.1 | DEAD/DEAH box helicase family protein | - |
| LCD43_RS24560 (LCD43_24580) | 25146..26414 | + | 1269 | WP_045337256.1 | ISL3 family transposase ISKpn25 | Transposase |
| LCD43_RS24565 (LCD43_24585) | 26555..27073 | + | 519 | Protein_25 | VOC family protein | - |
| LCD43_RS24570 (LCD43_24590) | 27174..27866 | - | 693 | WP_003032099.1 | GntR family transcriptional regulator | - |
| LCD43_RS24575 (LCD43_24595) | 28164..28949 | + | 786 | WP_003032097.1 | ABC transporter substrate-binding protein | - |
| LCD43_RS24580 (LCD43_24600) | 28954..29928 | + | 975 | WP_003032095.1 | SIS domain-containing protein | - |
| LCD43_RS24585 (LCD43_24605) | 29941..30753 | + | 813 | WP_003032093.1 | PfkB family carbohydrate kinase | - |
| LCD43_RS24590 (LCD43_24610) | 31145..31842 | + | 698 | WP_223861918.1 | IS1 family transposase | - |
| LCD43_RS24595 (LCD43_24615) | 31860..32246 | - | 387 | Protein_31 | IS3 family transposase ISEc52 | Transposase |
| LCD43_RS24600 (LCD43_24620) | 32327..33835 | - | 1509 | WP_001189111.1 | group II intron reverse transcriptase/maturase | - |
| LCD43_RS24605 (LCD43_24625) | 34508..35196 | - | 689 | Protein_33 | IS3-like element ISEc52 family transposase | - |
| LCD43_RS24610 | 35240..35563 | - | 324 | Protein_34 | transposase | - |
| LCD43_RS24615 | 35618..36388 | - | 771 | Protein_35 | putative cyclic di-GMP phosphodiesterase | VF |
| LCD43_RS24620 (LCD43_24640) | 36408..39788 | - | 3381 | WP_045337379.1 | Aerobic respiration control sensor protein ArcB | VF |
| LCD43_RS24625 (LCD43_24645) | 40111..41283 | + | 1173 | WP_230676866.1 | urea ABC transporter substrate-binding protein | - |
| LCD43_RS24630 (LCD43_24650) | 41340..42266 | + | 927 | WP_045337382.1 | urea ABC transporter permease subunit UrtB | - |
| LCD43_RS24635 (LCD43_24655) | 42276..43391 | + | 1116 | WP_004181994.1 | urea ABC transporter permease subunit UrtC | - |
| LCD43_RS24640 (LCD43_24660) | 43388..44137 | + | 750 | WP_004181995.1 | urea ABC transporter ATP-binding protein UrtD | - |
| LCD43_RS24645 (LCD43_24665) | 44148..44837 | + | 690 | WP_004181996.1 | urea ABC transporter ATP-binding subunit UrtE | - |
| LCD43_RS24650 (LCD43_24670) | 44873..45880 | + | 1008 | WP_004181997.1 | formamidase | - |
| LCD43_RS24660 (LCD43_24680) | 47081..48061 | + | 981 | WP_032636617.1 | IS5 family transposase ISKpn26 | Transposase |
| LCD43_RS24665 (LCD43_24685) | 49186..49908 | - | 723 | WP_029403849.1 | replication initiation protein | - |
| LCD43_RS24670 (LCD43_24690) | 50399..51262 | - | 864 | Protein_46 | translesion error-prone DNA polymerase V subunit UmuC | - |
| LCD43_RS24675 (LCD43_24695) | 51334..52454 | + | 1121 | WP_247952890.1 | IS3 family transposase ISSen4 | Transposase |
| LCD43_RS24680 (LCD43_24700) | 52483..53307 | + | 825 | Protein_48 | ISNCY family transposase ISCARN112 | Transposase |
| LCD43_RS24685 (LCD43_24705) | 53950..54522 | + | 573 | WP_001515348.1 | cytochrome b/b6 domain-containing protein | - |
| LCD43_RS24690 (LCD43_24710) | 54722..55645 | + | 924 | WP_000167917.1 | cation diffusion facilitator family transporter | - |
| LCD43_RS24695 (LCD43_24715) | 55779..55883 | - | 105 | Protein_51 | protein YdfV | - |
| LCD43_RS24700 (LCD43_24720) | 55908..56147 | + | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| LCD43_RS24705 (LCD43_24725) | 56147..56434 | + | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| LCD43_RS24710 (LCD43_24735) | 56506..56664 | + | 159 | WP_008325141.1 | type I toxin-antitoxin system Hok family toxin | - |
| LCD43_RS24715 (LCD43_24740) | 57541..57855 | + | 315 | WP_045337198.1 | hypothetical protein | - |
| LCD43_RS24720 (LCD43_24745) | 57965..58123 | + | 159 | WP_223861909.1 | hypothetical protein | - |
| LCD43_RS24725 (LCD43_24750) | 58255..63756 | + | 5502 | WP_045620554.1 | Multifunctional conjugation protein TraI | Relaxase |
| LCD43_RS24730 (LCD43_24755) | 63784..64572 | + | 789 | WP_045337326.1 | DsbA family protein | - |
| LCD43_RS24735 (LCD43_24760) | 64730..64957 | + | 228 | WP_045334731.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | - |
| LCD43_RS24740 (LCD43_24765) | 64984..65319 | + | 336 | WP_045334728.1 | hypothetical protein | - |
| LCD43_RS24745 (LCD43_24770) | 65516..65680 | - | 165 | WP_155404169.1 | hypothetical protein | - |
| LCD43_RS24750 (LCD43_24775) | 65929..66918 | - | 990 | WP_045337325.1 | tyrosine-type recombinase/integrase | - |
| LCD43_RS24755 (LCD43_24780) | 67209..68330 | - | 1122 | Protein_63 | IS3 family transposase ISSen4 | Transposase |
| LCD43_RS24760 (LCD43_24785) | 68695..69243 | + | 549 | Protein_64 | Tn3 family transposase TnpA_Tn5403 | Transposase |
| LCD43_RS24765 (LCD43_24790) | 70068..70397 | + | 330 | WP_000493286.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| LCD43_RS24770 (LCD43_24795) | 70378..70659 | + | 282 | WP_000780222.1 | helix-turn-helix transcriptional regulator | - |
| LCD43_RS24775 (LCD43_24800) | 70937..71500 | + | 564 | Protein_67 | IS5 family transposase IS5D | Transposase |
| LCD43_RS24780 (LCD43_24805) | 71561..72265 | + | 705 | WP_023312637.1 | IS6 family transposase IS26 | Transposase |
| LCD43_RS24785 (LCD43_24810) | 72370..73599 | + | 1230 | WP_247952891.1 | EAL domain-containing protein | - |
| LCD43_RS24790 (LCD43_24815) | 73724..74422 | - | 699 | WP_001390281.1 | IS1 family transposase IS1R | Transposase |
| LCD43_RS24795 (LCD43_24820) | 74641..77226 | + | 2586 | WP_047064185.1 | putative signaling protein | VF |
| LCD43_RS24800 (LCD43_24825) | 77260..77964 | - | 705 | WP_023312637.1 | IS6 family transposase IS26 | Transposase |
| LCD43_RS24805 (LCD43_24830) | 78049..78306 | - | 258 | Protein_73 | Tn3 family transposase TnpR_TnAs3 | Transposase |
| LCD43_RS24810 (LCD43_24835) | 78451..78819 | + | 369 | WP_032677090.1 | hypothetical protein | - |
| LCD43_RS24815 (LCD43_24840) | 79181..79609 | - | 429 | WP_001554382.1 | GFA family protein | - |
| LCD43_RS24820 (LCD43_24845) | 79803..80798 | - | 996 | WP_004118750.1 | IS110 family transposase IS1663 | Transposase |
| LCD43_RS24825 (LCD43_24850) | 81029..81418 | + | 390 | Protein_77 | IS5 family transposase ISThi1 | Transposase |
| LCD43_RS24830 (LCD43_24855) | 81643..82794 | - | 1152 | Protein_78 | Putative serine protease HtrA | VF |
| LCD43_RS24835 (LCD43_24860) | 82819..83766 | - | 948 | WP_023332903.1 | zinc metalloprotease HtpX | - |
| LCD43_RS24840 (LCD43_24865) | 83744..84241 | - | 498 | WP_001514138.1 | heat resistance protein PsiE-GI | - |
| LCD43_RS24845 (LCD43_24870) | 84244..85953 | - | 1710 | WP_047064109.1 | heat resistance system K+/H+ antiporter KefB-GI | - |
| LCD43_RS24850 (LCD43_24875) | 85957..86397 | - | 441 | WP_000786816.1 | heat resistance system thioredoxin Trx-GI | - |
| LCD43_RS24855 (LCD43_24880) | 86387..87532 | - | 1146 | WP_023326111.1 | hypothetical protein | - |
| LCD43_RS24860 (LCD43_24885) | 87581..88222 | - | 642 | WP_023329026.1 | heat resistance membrane protein HdeD-GI | - |
| LCD43_RS24865 (LCD43_24890) | 88312..89199 | - | 888 | WP_013307890.1 | heat resistance protein YfdX2 | - |
| LCD43_RS24870 (LCD43_24895) | 89302..90216 | - | 915 | WP_023332905.1 | heat resistance protein YfdX1 | - |
| LCD43_RS24875 (LCD43_24900) | 90239..90697 | - | 459 | WP_004118778.1 | Spore protein SP21 | VF |
| LCD43_RS24880 (LCD43_24905) | 90785..90925 | - | 141 | WP_016154560.1 | hypothetical protein | - |
| LCD43_RS24885 (LCD43_24910) | 90925..93774 | - | 2850 | WP_023332906.1 | ATP-dependent Clp protease ATP-binding subunit ClpC | VF |
| LCD43_RS24890 (LCD43_24915) | 93880..94449 | - | 570 | WP_023332907.1 | Spore protein SP21 | VF |
| LCD43_RS24895 (LCD43_24920) | 94484..94765 | - | 282 | WP_023332908.1 | helix-turn-helix domain-containing protein | - |
| LCD43_RS24900 (LCD43_24925) | 94959..95222 | - | 264 | WP_001295708.1 | IS66 family transposase ISPpu19 | Transposase |
| LCD43_RS24905 (LCD43_24930) | 95382..96350 | + | 969 | WP_016151349.1 | IS5 family transposase IS903B | Transposase |
| LCD43_RS24910 (LCD43_24935) | 96701..97117 | - | 417 | WP_000754567.1 | type II toxin-antitoxin system VapC family toxin | - |
| LCD43_RS24915 (LCD43_24940) | 97114..97344 | - | 231 | WP_023293777.1 | type II toxin-antitoxin system VapB family antitoxin | - |
| LCD43_RS24920 (LCD43_24945) | 97896..98240 | - | 345 | WP_047747546.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|