MGE detailed information
MGE type: Prophage MGE length: 75125 bp
Accession: NZ_CP083819 Location: 2709624..2784748 Organism: Enterobacter roggenkampii strain 13840-yvys Replicon: chromosome
Accession: NZ_CP083819 Location: 2709624..2784748 Organism: Enterobacter roggenkampii strain 13840-yvys Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LCD41_RS13000 (LCD41_13020) | 2705385..2705843 | + | 459 | WP_047747397.1 | DUF986 family protein | - |
| LCD41_RS13005 (LCD41_13025) | 2706242..2706808 | + | 567 | WP_039266936.1 | manganese efflux pump MntP | - |
| LCD41_RS13010 (LCD41_13030) | 2706805..2707620 | - | 816 | WP_021240418.1 | 23S rRNA (guanine(745)-N(1))-methyltransferase | - |
| LCD41_RS13015 (LCD41_13035) | 2707686..2709404 | - | 1719 | WP_047747396.1 | peptidoglycan glycosyltransferase FtsI | - |
| LCD41_RS13020 (LCD41_13040) | 2709624..2709833 | - | 210 | WP_001062678.1 | transcription antiterminator/RNA stability regulator CspE | - |
| LCD41_RS13025 (LCD41_13045) | 2709847..2709991 | - | 145 | Protein_2550 | DUF2627 domain-containing protein | - |
| LCD41_RS13030 (LCD41_13050) | 2710517..2711506 | - | 990 | WP_074172801.1 | MBL fold metallo-hydrolase | - |
| LCD41_RS13035 (LCD41_13055) | 2711531..2711821 | - | 291 | WP_008500484.1 | YebO family protein | - |
| LCD41_RS13040 (LCD41_13060) | 2711896..2712039 | - | 144 | WP_047747394.1 | PhoP/PhoQ regulator MgrB | - |
| LCD41_RS13045 (LCD41_13065) | 2712199..2712438 | + | 240 | WP_008500483.1 | YobH family protein | - |
| LCD41_RS13050 (LCD41_13070) | 2712505..2713296 | - | 792 | WP_008500482.1 | DNA-binding transcriptional regulator KdgR | - |
| LCD41_RS13055 (LCD41_13075) | 2713475..2714844 | + | 1370 | Protein_2556 | MFS transporter | - |
| LCD41_RS13060 (LCD41_13080) | 2714895..2715776 | - | 882 | WP_014884290.1 | protease HtpX | - |
| LCD41_RS13065 (LCD41_13085) | 2715970..2718018 | - | 2049 | WP_047747393.1 | carboxy terminal-processing peptidase | - |
| LCD41_RS13070 (LCD41_13090) | 2718038..2718724 | - | 687 | WP_014884292.1 | RNA chaperone ProQ | - |
| LCD41_RS13075 (LCD41_13095) | 2718821..2719318 | - | 498 | WP_008500476.1 | GAF domain-containing protein | - |
| LCD41_RS13080 (LCD41_13100) | 2719451..2720734 | + | 1284 | WP_021240425.1 | membrane integrity lipid transport subunit YebS | - |
| LCD41_RS13085 (LCD41_13105) | 2720703..2723336 | + | 2634 | WP_047747392.1 | hypothetical protein | VF |
| LCD41_RS13090 (LCD41_13110) | 2723408..2724856 | + | 1449 | WP_220130567.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| LCD41_RS13095 (LCD41_13115) | 2724962..2725201 | + | 240 | WP_008500472.1 | YebV family protein | - |
| LCD41_RS13100 (LCD41_13120) | 2725236..2725880 | - | 645 | WP_047747390.1 | protein-serine/threonine phosphatase | - |
| LCD41_RS13105 (LCD41_13125) | 2726057..2726998 | + | 942 | WP_047747389.1 | VirK/YbjX family protein | - |
| LCD41_RS13110 (LCD41_13130) | 2727469..2727858 | - | 390 | WP_063409997.1 | S24 family peptidase | - |
| LCD41_RS13115 (LCD41_13135) | 2727858..2728097 | - | 240 | WP_196343306.1 | hypothetical protein | - |
| LCD41_RS13120 (LCD41_13140) | 2728197..2728463 | + | 267 | WP_247169769.1 | DinI family protein | - |
| LCD41_RS13125 (LCD41_13145) | 2728557..2729891 | - | 1335 | WP_247169770.1 | phage tail protein | - |
| LCD41_RS13130 (LCD41_13150) | 2729954..2730187 | - | 234 | WP_047746653.1 | hypothetical protein | - |
| LCD41_RS13135 (LCD41_13155) | 2730295..2730966 | - | 672 | WP_047746651.1 | hypothetical protein | - |
| LCD41_RS13140 (LCD41_13160) | 2731324..2734479 | - | 3156 | WP_247169771.1 | phage tail protein | - |
| LCD41_RS13145 (LCD41_13165) | 2734489..2735016 | - | 528 | WP_247169772.1 | tail assembly protein | - |
| LCD41_RS13150 (LCD41_13170) | 2734959..2735678 | - | 720 | WP_247169773.1 | C40 family peptidase | - |
| LCD41_RS13155 (LCD41_13175) | 2735678..2736382 | - | 705 | WP_058647138.1 | phage minor tail protein L | - |
| LCD41_RS13160 (LCD41_13180) | 2736419..2736772 | - | 354 | WP_247169774.1 | phage tail protein | - |
| LCD41_RS13165 (LCD41_13185) | 2736829..2737041 | - | 213 | WP_025913429.1 | hypothetical protein | - |
| LCD41_RS13170 (LCD41_13190) | 2737081..2739963 | - | 2883 | WP_247169775.1 | tail protein (tape measure) | - |
| LCD41_RS13175 (LCD41_13195) | 2740036..2741169 | - | 1134 | WP_220421043.1 | hypothetical protein | - |
| LCD41_RS13180 (LCD41_13200) | 2741318..2742061 | - | 744 | WP_104651797.1 | hypothetical protein | - |
| LCD41_RS13185 (LCD41_13205) | 2742144..2742824 | - | 681 | WP_247169776.1 | BRO family protein | - |
| LCD41_RS13190 (LCD41_13210) | 2742805..2742966 | - | 162 | WP_104651799.1 | Arc family DNA-binding protein | - |
| LCD41_RS13195 (LCD41_13215) | 2743082..2743402 | + | 321 | WP_247169777.1 | Arc family DNA-binding protein | - |
| LCD41_RS13200 (LCD41_13220) | 2743829..2744494 | - | 666 | WP_247169778.1 | DUF6246 family protein | - |
| LCD41_RS13205 (LCD41_13225) | 2744568..2745311 | - | 744 | WP_247169779.1 | Ig-like domain-containing protein | - |
| LCD41_RS13210 (LCD41_13230) | 2745374..2745757 | - | 384 | WP_247169780.1 | hypothetical protein | - |
| LCD41_RS13215 (LCD41_13235) | 2745754..2746179 | - | 426 | WP_247169781.1 | HK97 gp10 family phage protein | - |
| LCD41_RS13220 (LCD41_13240) | 2746182..2746532 | - | 351 | WP_247169782.1 | hypothetical protein | - |
| LCD41_RS13225 (LCD41_13245) | 2746543..2746860 | - | 318 | WP_163448443.1 | DUF6527 family protein | - |
| LCD41_RS13230 (LCD41_13250) | 2746857..2747027 | - | 171 | WP_039273331.1 | hypothetical protein | - |
| LCD41_RS13235 (LCD41_13255) | 2747027..2747407 | - | 381 | WP_033486571.1 | hypothetical protein | - |
| LCD41_RS13240 (LCD41_13260) | 2747410..2747811 | - | 402 | WP_247169783.1 | hypothetical protein | - |
| LCD41_RS13245 (LCD41_13265) | 2747822..2748916 | - | 1095 | WP_247169784.1 | DUF6260 family protein | - |
| LCD41_RS13250 (LCD41_13270) | 2748928..2749356 | - | 429 | WP_088902288.1 | hypothetical protein | - |
| LCD41_RS13255 (LCD41_13275) | 2749360..2750745 | - | 1386 | WP_247169785.1 | DUF2213 domain-containing protein | - |
| LCD41_RS13260 (LCD41_13280) | 2750822..2751004 | - | 183 | WP_247169786.1 | hypothetical protein | - |
| LCD41_RS13265 (LCD41_13285) | 2751073..2751642 | - | 570 | WP_247169787.1 | hypothetical protein | - |
| LCD41_RS13270 (LCD41_13290) | 2751712..2752716 | - | 1005 | WP_247169788.1 | phage minor head protein | - |
| LCD41_RS13275 (LCD41_13295) | 2752652..2754112 | - | 1461 | WP_247169789.1 | DUF1073 domain-containing protein | - |
| LCD41_RS13280 (LCD41_13300) | 2754125..2755597 | - | 1473 | WP_247169790.1 | terminase | - |
| LCD41_RS13285 (LCD41_13305) | 2755597..2756112 | - | 516 | WP_039025437.1 | hypothetical protein | - |
| LCD41_RS13290 (LCD41_13310) | 2756278..2756496 | - | 219 | WP_247169791.1 | hypothetical protein | - |
| LCD41_RS13295 (LCD41_13315) | 2756585..2756824 | - | 240 | WP_247169792.1 | hypothetical protein | - |
| LCD41_RS13300 (LCD41_13320) | 2756935..2757141 | - | 207 | WP_148399986.1 | lysis system o-spanin lipoprotein Rz1 | - |
| LCD41_RS13305 (LCD41_13330) | 2757367..2757807 | - | 441 | WP_247169793.1 | lysozyme | - |
| LCD41_RS13310 (LCD41_13335) | 2757794..2758099 | - | 306 | WP_122008274.1 | phage holin family protein | - |
| LCD41_RS13315 (LCD41_13340) | 2758266..2758652 | + | 387 | WP_131729159.1 | hypothetical protein | - |
| LCD41_RS13320 (LCD41_13345) | 2758671..2759435 | - | 765 | WP_047723639.1 | antitermination protein | - |
| LCD41_RS13325 (LCD41_13350) | 2759435..2759551 | - | 117 | WP_247169794.1 | hypothetical protein | - |
| LCD41_RS13330 (LCD41_13355) | 2759548..2759907 | - | 360 | WP_021571188.1 | RusA family crossover junction endodeoxyribonuclease | - |
| LCD41_RS13335 (LCD41_13360) | 2759904..2760188 | - | 285 | WP_247169795.1 | DUF1364 domain-containing protein | - |
| LCD41_RS13340 (LCD41_13365) | 2760181..2760849 | - | 669 | WP_247169796.1 | metallophosphoesterase | - |
| LCD41_RS13345 (LCD41_13370) | 2760879..2761016 | - | 138 | WP_247169797.1 | hypothetical protein | - |
| LCD41_RS13350 (LCD41_13375) | 2761009..2761458 | - | 450 | WP_032647533.1 | recombination protein NinB | - |
| LCD41_RS13355 (LCD41_13380) | 2761891..2762499 | - | 609 | WP_247169798.1 | DUF551 domain-containing protein | - |
| LCD41_RS13360 (LCD41_13385) | 2762625..2762840 | - | 216 | Protein_2617 | ead/Ea22-like family protein | - |
| LCD41_RS13365 (LCD41_13390) | 2762864..2763241 | - | 378 | WP_247169799.1 | hypothetical protein | - |
| LCD41_RS13370 (LCD41_13395) | 2763238..2763537 | - | 300 | WP_059359605.1 | hypothetical protein | - |
| LCD41_RS13375 (LCD41_13400) | 2763537..2764970 | - | 1434 | WP_247169800.1 | DnaB-like helicase C-terminal domain-containing protein | - |
| LCD41_RS13380 (LCD41_13405) | 2764960..2765856 | - | 897 | WP_247169801.1 | DNA replication protein | - |
| LCD41_RS13385 (LCD41_13410) | 2765849..2765995 | - | 147 | WP_015571544.1 | hypothetical protein | - |
| LCD41_RS13390 (LCD41_13415) | 2766085..2766630 | - | 546 | WP_247169802.1 | toxin YdaT family protein | - |
| LCD41_RS13395 (LCD41_13420) | 2766660..2766887 | - | 228 | WP_016042179.1 | helix-turn-helix domain-containing protein | - |
| LCD41_RS13400 (LCD41_13425) | 2766998..2767687 | + | 690 | WP_016042178.1 | helix-turn-helix transcriptional regulator | - |
| LCD41_RS13405 (LCD41_13430) | 2767850..2768758 | + | 909 | WP_023306034.1 | hypothetical protein | - |
| LCD41_RS13410 (LCD41_13435) | 2768896..2769093 | - | 198 | WP_063840716.1 | hypothetical protein | - |
| LCD41_RS13415 (LCD41_13440) | 2769527..2770051 | + | 525 | WP_247169803.1 | hypothetical protein | - |
| LCD41_RS13420 (LCD41_13445) | 2770339..2770536 | + | 198 | WP_045345362.1 | DUF1482 family protein | - |
| LCD41_RS13425 (LCD41_13450) | 2770608..2770889 | + | 282 | WP_045345359.1 | host nuclease inhibitor GamL | - |
| LCD41_RS13430 (LCD41_13455) | 2770907..2771653 | + | 747 | WP_247169804.1 | phage recombination protein Bet | - |
| LCD41_RS13435 (LCD41_13460) | 2771650..2772267 | + | 618 | WP_032652776.1 | YqaJ viral recombinase family protein | - |
| LCD41_RS13440 (LCD41_13465) | 2772264..2772692 | + | 429 | WP_247169805.1 | regulator | - |
| LCD41_RS13445 (LCD41_13470) | 2772689..2772856 | + | 168 | WP_165590470.1 | hypothetical protein | - |
| LCD41_RS13450 (LCD41_13475) | 2772853..2773512 | + | 660 | WP_247169806.1 | MT-A70 family methyltransferase | - |
| LCD41_RS13455 (LCD41_13480) | 2773509..2774564 | + | 1056 | WP_247169807.1 | DNA cytosine methyltransferase | - |
| LCD41_RS13460 (LCD41_13485) | 2774561..2774779 | + | 219 | Protein_2637 | hypothetical protein | - |
| LCD41_RS13465 (LCD41_13490) | 2774776..2775072 | + | 297 | WP_042889503.1 | DUF4406 domain-containing protein | - |
| LCD41_RS13470 (LCD41_13495) | 2775069..2775260 | + | 192 | WP_063136989.1 | DUF1382 family protein | - |
| LCD41_RS13475 (LCD41_13500) | 2775352..2775573 | + | 222 | WP_058686198.1 | TraR/DksA family transcriptional regulator | - |
| LCD41_RS13480 (LCD41_13505) | 2775585..2776280 | + | 696 | WP_234115282.1 | hypothetical protein | - |
| LCD41_RS13485 (LCD41_13510) | 2776258..2776497 | + | 240 | WP_045328639.1 | DUF4222 domain-containing protein | - |
| LCD41_RS13490 (LCD41_13515) | 2776506..2776736 | + | 231 | WP_247169808.1 | hypothetical protein | - |
| LCD41_RS13495 (LCD41_13520) | 2776896..2777168 | + | 273 | WP_103142239.1 | excisionase | - |
| LCD41_RS13500 (LCD41_13525) | 2777137..2778222 | + | 1086 | WP_103142238.1 | hypothetical protein ; Integrase | Integrase |
| - | 2778293..2778438 | + | 146 | - | - | Antitoxin Detail |
| - | 2778300..2778403 | - | 104 | - | - | Toxin Detail |
| LCD41_RS13505 (LCD41_13530) | 2778542..2778880 | - | 339 | WP_008500468.1 | YebY family protein | - |
| LCD41_RS13510 (LCD41_13535) | 2778897..2779766 | - | 870 | WP_047747388.1 | copper homeostasis membrane protein CopD | - |
| LCD41_RS13515 (LCD41_13540) | 2779768..2780139 | - | 372 | WP_047747387.1 | CopC domain-containing protein YobA | - |
| LCD41_RS13520 (LCD41_13545) | 2780277..2780507 | + | 231 | WP_047747386.1 | DNA polymerase III subunit theta | - |
| LCD41_RS13525 (LCD41_13550) | 2780618..2781268 | + | 651 | WP_032675034.1 | carbon-nitrogen hydrolase family protein | - |
| LCD41_RS13530 (LCD41_13555) | 2781293..2781955 | + | 663 | WP_008500463.1 | exodeoxyribonuclease X | - |
| LCD41_RS13535 (LCD41_13560) | 2781952..2784012 | - | 2061 | WP_047747385.1 | oligopeptidase B | - |
| LCD41_RS13540 (LCD41_13565) | 2784098..2784748 | - | 651 | WP_021240435.1 | tellurite resistance TerB family protein | - |
| LCD41_RS13545 (LCD41_13570) | 2784920..2786098 | + | 1179 | WP_021240436.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| LCD41_RS13550 (LCD41_13575) | 2786140..2786781 | - | 642 | WP_047747384.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| LCD41_RS13555 (LCD41_13580) | 2786821..2788632 | - | 1812 | WP_047747383.1 | phosphogluconate dehydratase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|