MGE detailed information
MGE type: Prophage MGE length: 53018 bp
Accession: NZ_CP083815 Location: 2624381..2677398 Organism: Enterobacter asburiae strain 161373-yvys Replicon: chromosome
Accession: NZ_CP083815 Location: 2624381..2677398 Organism: Enterobacter asburiae strain 161373-yvys Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LCD39_RS12980 (LCD39_12995) | 2619440..2620291 | + | 852 | WP_006810994.1 | PTS mannose transporter subunit IID | - |
| LCD39_RS12985 (LCD39_13000) | 2620346..2620804 | + | 459 | WP_111964794.1 | DUF986 family protein | - |
| LCD39_RS12990 (LCD39_13005) | 2621203..2621769 | + | 567 | WP_029741998.1 | manganese efflux pump MntP | - |
| LCD39_RS12995 (LCD39_13010) | 2621766..2622581 | - | 816 | WP_033145829.1 | 23S rRNA (guanine(745)-N(1))-methyltransferase | - |
| LCD39_RS13000 (LCD39_13015) | 2622647..2624365 | - | 1719 | WP_246948113.1 | peptidoglycan glycosyltransferase FtsI | - |
| LCD39_RS13005 (LCD39_13020) | 2624381..2625349 | + | 969 | WP_013087110.1 | IS5 family transposase IS903B | Transposase |
| LCD39_RS13010 (LCD39_13025) | 2625493..2625702 | - | 210 | WP_001062678.1 | transcription antiterminator/RNA stability regulator CspE | - |
| LCD39_RS13015 (LCD39_13030) | 2625716..2625860 | - | 145 | Protein_2553 | DUF2627 domain-containing protein | - |
| LCD39_RS13020 (LCD39_13035) | 2626386..2627375 | - | 990 | WP_246946325.1 | MBL fold metallo-hydrolase | - |
| LCD39_RS13025 (LCD39_13040) | 2627397..2627687 | - | 291 | WP_008500484.1 | YebO family protein | - |
| LCD39_RS13030 (LCD39_13045) | 2627762..2627905 | - | 144 | WP_006175995.1 | PhoP/PhoQ regulator MgrB | - |
| LCD39_RS13035 (LCD39_13050) | 2628068..2628307 | + | 240 | WP_033145832.1 | YobH family protein | - |
| LCD39_RS13040 (LCD39_13055) | 2628376..2629167 | - | 792 | WP_023312208.1 | DNA-binding transcriptional regulator KdgR | - |
| LCD39_RS13045 (LCD39_13060) | 2629347..2629603 | + | 257 | Protein_2559 | MFS transporter | - |
| LCD39_RS13050 (LCD39_13065) | 2630014..2630907 | - | 894 | Protein_2560 | IS3 family transposase ISEhe3 | Transposase |
| LCD39_RS13055 (LCD39_13070) | 2630975..2632126 | + | 1152 | WP_069219379.1 | IS30 family transposase IS30D | Transposase |
| LCD39_RS13060 (LCD39_13075) | 2632139..2632384 | - | 246 | Protein_2562 | IS3 family transposase ISEhe3 | Transposase |
| LCD39_RS13065 (LCD39_13080) | 2632606..2633826 | + | 1221 | Protein_2563 | MFS transporter | - |
| LCD39_RS13070 (LCD39_13085) | 2633877..2634758 | - | 882 | WP_014884290.1 | protease HtpX | - |
| LCD39_RS13075 (LCD39_13090) | 2634952..2637000 | - | 2049 | WP_246946326.1 | carboxy terminal-processing peptidase | - |
| LCD39_RS13080 (LCD39_13095) | 2637020..2637706 | - | 687 | WP_014884292.1 | RNA chaperone ProQ | - |
| LCD39_RS13085 (LCD39_13100) | 2637803..2638300 | - | 498 | WP_246946327.1 | GAF domain-containing protein | - |
| LCD39_RS13090 (LCD39_13105) | 2638433..2639716 | + | 1284 | WP_023312213.1 | membrane integrity lipid transport subunit YebS | - |
| LCD39_RS13095 (LCD39_13110) | 2639685..2642318 | + | 2634 | WP_246946328.1 | hypothetical protein | VF |
| LCD39_RS13100 (LCD39_13115) | 2642390..2643838 | + | 1449 | WP_246946329.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| LCD39_RS13105 (LCD39_13120) | 2643945..2644184 | + | 240 | WP_008500472.1 | YebV family protein | - |
| LCD39_RS13110 (LCD39_13125) | 2644219..2644863 | - | 645 | WP_033145837.1 | protein-serine/threonine phosphatase | - |
| LCD39_RS13115 (LCD39_13130) | 2645030..2645977 | + | 948 | WP_167818519.1 | VirK/YbjX family protein | - |
| LCD39_RS13120 (LCD39_13135) | 2646442..2647652 | - | 1211 | Protein_2574 | translesion error-prone DNA polymerase V subunit UmuC | - |
| LCD39_RS13125 (LCD39_13140) | 2647961..2648212 | + | 252 | Protein_2575 | DinI-like family protein | - |
| LCD39_RS13130 (LCD39_13145) | 2648411..2649391 | - | 981 | WP_197228368.1 | IS5 family transposase ISKpn26 | Transposase |
| LCD39_RS13135 (LCD39_13150) | 2649468..2650436 | + | 969 | WP_013087110.1 | IS5 family transposase IS903B | Transposase |
| LCD39_RS13140 (LCD39_13155) | 2650571..2651029 | + | 459 | WP_167818520.1 | hypothetical protein | - |
| LCD39_RS13145 (LCD39_13160) | 2651123..2652097 | - | 975 | WP_246946330.1 | acyltransferase family protein | - |
| LCD39_RS13150 (LCD39_13165) | 2652405..2653385 | + | 981 | WP_197228368.1 | IS5 family transposase ISKpn26 | Transposase |
| LCD39_RS13155 (LCD39_13170) | 2653997..2654965 | + | 969 | WP_013087110.1 | IS5 family transposase IS903B | Transposase |
| LCD39_RS13160 (LCD39_13175) | 2655946..2656374 | + | 429 | WP_246948116.1 | tyrosine-type recombinase/integrase | - |
| - | 2656446..2656590 | + | 145 | - | - | Antitoxin Detail |
| - | 2656452..2656555 | - | 104 | - | - | Toxin Detail |
| LCD39_RS13165 (LCD39_13180) | 2656694..2657032 | - | 339 | WP_246946331.1 | YebY family protein | - |
| LCD39_RS13170 (LCD39_13185) | 2657049..2657918 | - | 870 | WP_087822782.1 | copper homeostasis membrane protein CopD | - |
| LCD39_RS13175 (LCD39_13190) | 2657920..2658291 | - | 372 | WP_213729597.1 | CopC domain-containing protein YobA | - |
| LCD39_RS13180 (LCD39_13195) | 2658428..2658658 | + | 231 | WP_064672722.1 | DNA polymerase III subunit theta | - |
| LCD39_RS13185 (LCD39_13200) | 2658769..2659419 | + | 651 | WP_033145843.1 | carbon-nitrogen hydrolase family protein | - |
| LCD39_RS13190 (LCD39_13205) | 2659444..2660106 | + | 663 | WP_010432611.1 | exodeoxyribonuclease X | - |
| LCD39_RS13195 (LCD39_13210) | 2660103..2662163 | - | 2061 | WP_069303002.1 | oligopeptidase B | - |
| LCD39_RS13200 (LCD39_13215) | 2662249..2662896 | - | 648 | WP_039263650.1 | tellurite resistance TerB family protein | - |
| LCD39_RS13205 (LCD39_13220) | 2663067..2664245 | + | 1179 | WP_246946332.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| LCD39_RS13210 (LCD39_13225) | 2664287..2664928 | - | 642 | WP_014884307.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| LCD39_RS13215 (LCD39_13230) | 2664968..2666779 | - | 1812 | WP_246946333.1 | phosphogluconate dehydratase | - |
| LCD39_RS13220 (LCD39_13235) | 2667012..2668487 | - | 1476 | WP_023312228.1 | glucose-6-phosphate dehydrogenase | - |
| LCD39_RS13225 (LCD39_13240) | 2668844..2669713 | + | 870 | WP_023312229.1 | MurR/RpiR family transcriptional regulator | - |
| LCD39_RS13230 (LCD39_13245) | 2669854..2671296 | + | 1443 | WP_008500455.1 | pyruvate kinase | - |
| LCD39_RS13235 (LCD39_13250) | 2671342..2672313 | - | 972 | WP_029741765.1 | hypothetical protein | VF |
| LCD39_RS13240 (LCD39_13255) | 2672435..2673754 | - | 1320 | WP_246946334.1 | murein DD-endopeptidase MepM | - |
| LCD39_RS13245 (LCD39_13260) | 2673770..2674714 | - | 945 | WP_045404493.1 | zinc ABC transporter substrate-binding protein ZnuA | - |
| LCD39_RS13250 (LCD39_13265) | 2674792..2675547 | + | 756 | WP_023312233.1 | hypothetical protein | VF |
| LCD39_RS13255 (LCD39_13270) | 2675544..2676329 | + | 786 | WP_048979928.1 | zinc ABC transporter permease subunit ZnuB | - |
| LCD39_RS13260 (LCD39_13275) | 2676388..2677398 | - | 1011 | WP_023312235.1 | Holliday junction branch migration DNA helicase RuvB | - |
| LCD39_RS13265 (LCD39_13280) | 2677407..2678021 | - | 615 | WP_023312236.1 | Holliday junction branch migration protein RuvA | - |
| LCD39_RS13270 (LCD39_13285) | 2678102..2678623 | - | 522 | WP_003859749.1 | crossover junction endodeoxyribonuclease RuvC | - |
| LCD39_RS13275 (LCD39_13290) | 2678658..2679398 | - | 741 | WP_008500447.1 | YebC/PmpR family DNA-binding transcriptional regulator | - |
| LCD39_RS13280 (LCD39_13295) | 2679426..2679869 | - | 444 | WP_033145850.1 | dihydroneopterin triphosphate diphosphatase | - |
| LCD39_RS13285 (LCD39_13300) | 2679871..2681643 | - | 1773 | WP_023312238.1 | aspartate--tRNA ligase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|