MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 62052 bp
Accession: NZ_CP083805 Location: 828337..890388 Organism: Staphylococcus argenteus strain 1801221 Replicon: chromosome
Accession: NZ_CP083805 Location: 828337..890388 Organism: Staphylococcus argenteus strain 1801221 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LB317_RS03820 (824390) | 824390..825301 | + | 912 | WP_031787679.1 | RNase adapter RapZ | - |
| LB317_RS03825 (825298) | 825298..826293 | + | 996 | WP_031787680.1 | YvcK family protein | - |
| LB317_RS03830 (826405) | 826405..827349 | + | 945 | WP_000006553.1 | DNA-binding protein WhiA | - |
| LB317_RS03835 (827914) | 827914..828501 | + | 588 | WP_001049165.1 | ATP-dependent Clp endopeptidase proteolytic subunit ClpP | - |
| LB317_RS03840 (828681) | 828681..830315 | + | 1635 | Protein_745 | malolactic enzyme | - |
| LB317_RS03845 (830522) | 830522..831424 | - | 903 | WP_031787681.1 | TIGR01777 family oxidoreductase | - |
| LB317_RS03850 (832140) | 832140..832775 | + | 636 | WP_031896297.1 | DUF4887 domain-containing protein | - |
| LB317_RS03855 (833225) | 833225..834238 | + | 1014 | WP_000654033.1 | sugar-binding domain-containing protein | - |
| LB317_RS03860 (834291) | 834291..835301 | + | 1011 | WP_000279412.1 | type I glyceraldehyde-3-phosphate dehydrogenase | - |
| LB317_RS03865 (835440) | 835440..836630 | + | 1191 | WP_001074740.1 | phosphoglycerate kinase | - |
| LB317_RS03870 (836754) | 836754..837515 | + | 762 | WP_031788243.1 | triose-phosphate isomerase | - |
| LB317_RS03875 (837518) | 837518..839035 | + | 1518 | WP_031788244.1 | 2,3-bisphosphoglycerate-independent phosphoglycerate mutase | - |
| LB317_RS03880 (839165) | 839165..840469 | + | 1305 | WP_001121757.1 | phosphopyruvate hydratase | - |
| LB317_RS03885 (840816) | 840816..841274 | + | 459 | WP_000763764.1 | hypothetical protein | - |
| LB317_RS03890 (841341) | 841341..841574 | + | 234 | WP_000556760.1 | preprotein translocase subunit SecG | - |
| LB317_RS03895 (841690) | 841690..842430 | + | 741 | WP_001165963.1 | carboxylesterase | - |
| LB317_RS03900 (842464) | 842464..844836 | + | 2373 | WP_031788245.1 | ribonuclease R | - |
| LB317_RS03905 (844858) | 844858..845322 | + | 465 | WP_001085185.1 | SsrA-binding protein SmpB | - |
| LB317_RS03915 (846386) | 846386..846535 | + | 150 | WP_072324202.1 | IS3 family transposase IS655 | Transposase |
| LB317_RS03920 (846522) | 846522..846627 | + | 106 | Protein_760 | terminase small subunit | - |
| LB317_RS03925 (846863) | 846863..847408 | + | 546 | WP_031788246.1 | hypothetical protein | - |
| LB317_RS03930 (847820) | 847820..848176 | + | 357 | WP_031788247.1 | hypothetical protein | - |
| LB317_RS03935 (848866) | 848866..849594 | - | 729 | WP_031788248.1 | DUF5067 domain-containing protein | - |
| LB317_RS03940 (850046) | 850046..850330 | + | 285 | WP_000134547.1 | hypothetical protein | - |
| LB317_RS03945 (850481) | 850481..850801 | + | 321 | WP_000805733.1 | DUF961 family protein | - |
| LB317_RS03950 (850815) | 850815..851117 | + | 303 | WP_000386891.1 | hypothetical protein | - |
| LB317_RS03955 (851292) | 851292..852383 | + | 1092 | WP_000172934.1 | replication initiation factor domain-containing protein | - |
| LB317_RS03960 (852444) | 852444..853499 | + | 1056 | WP_239794173.1 | conjugal transfer protein | - |
| LB317_RS03965 (853504) | 853504..853764 | + | 261 | WP_000015644.1 | TcpD family membrane protein | - |
| LB317_RS03970 (853776) | 853776..854159 | + | 384 | WP_000358146.1 | TcpE family conjugal transfer membrane protein | - |
| LB317_RS03975 (854194) | 854194..856689 | + | 2496 | WP_117223777.1 | ATP-binding protein | - |
| LB317_RS03980 (856743) | 856743..858101 | + | 1359 | WP_001251211.1 | FtsK/SpoIIIE domain-containing protein | - |
| LB317_RS03985 (858106) | 858106..859953 | + | 1848 | WP_000681154.1 | membrane protein | - |
| LB317_RS03990 (859943) | 859943..860989 | + | 1047 | WP_000247465.1 | N-acetylmuramoyl-L-alanine amidase domain-containing protein | VF |
| LB317_RS03995 (860996) | 860996..861586 | + | 591 | WP_000810443.1 | hypothetical protein | - |
| LB317_RS04000 (861642) | 861642..861998 | + | 357 | WP_001255379.1 | cystatin-like fold lipoprotein | - |
| LB317_RS04005 (862107) | 862107..862610 | + | 504 | WP_000746375.1 | IS30 family transposase ISSau5 | Transposase |
| LB317_RS04010 (862639) | 862639..863127 | + | 489 | WP_164022204.1 | IS30 family transposase ISSau5 | Transposase |
| LB317_RS04015 (863476) | 863476..863910 | + | 435 | WP_031788249.1 | winged helix DNA-binding protein | - |
| LB317_RS04020 (863911) | 863911..864735 | + | 825 | WP_031788250.1 | N-acyl homoserine lactonase family protein | - |
| LB317_RS04025 (864970) | 864970..865494 | + | 525 | WP_031788251.1 | N-acetyltransferase | - |
| LB317_RS04030 (865772) | 865772..868885 | + | 3114 | WP_047451200.1 | Clumping factor A | VF |
| LB317_RS04035 (869107) | 869107..870633 | + | 1527 | WP_031788348.1 | Staphylocoagulase | VF |
| LB317_RS04040 (870990) | 870990..872018 | + | 1029 | WP_031788349.1 | extracellular matrix protein-binding adhesin Emp | - |
| LB317_RS04045 (872346) | 872346..872828 | + | 483 | WP_031788350.1 | hypothetical protein | VF |
| LB317_RS04050 (873171) | 873171..873839 | + | 669 | WP_031788100.1 | thermonuclease family protein | - |
| LB317_RS04055 (874203) | 874203..874403 | + | 201 | WP_001059082.1 | cold-shock protein | - |
| LB317_RS04060 (875016) | 875016..875228 | - | 213 | WP_001007088.1 | hypothetical protein | - |
| LB317_RS04065 (875289) | 875289..875573 | - | 285 | WP_031788101.1 | hypothetical protein | - |
| LB317_RS04070 (875662) | 875662..876231 | - | 570 | WP_031788102.1 | lipoprotein N-acylation protein LnsA | - |
| LB317_RS04075 (876430) | 876430..876609 | + | 180 | WP_088808311.1 | hypothetical protein | - |
| LB317_RS04080 (876766) | 876766..876954 | - | 189 | WP_000172413.1 | hypothetical protein | Toxin Detail |
| LB317_RS04085 (876983) | 876983..877243 | - | 261 | WP_000790107.1 | hypothetical protein | Antitoxin Detail |
| LB317_RS04090 (877583) | 877583..877786 | + | 204 | WP_000145167.1 | sterile alpha motif-like domain-containing protein | - |
| LB317_RS04095 (877783) | 877783..878019 | - | 237 | WP_000368686.1 | hypothetical protein | - |
| LB317_RS04100 (878244) | 878244..878825 | + | 582 | WP_031788103.1 | histidine phosphatase family protein | - |
| LB317_RS04105 (878892) | 878892..879509 | - | 618 | WP_031788104.1 | LysE family transporter | - |
| LB317_RS04110 (879673) | 879673..880164 | - | 492 | WP_000695603.1 | GNAT family N-acetyltransferase | - |
| LB317_RS04115 (880571) | 880571..880993 | - | 423 | WP_001007646.1 | organic hydroperoxide resistance protein | - |
| LB317_RS04120 (881142) | 881142..881861 | + | 720 | WP_047451209.1 | type I 3-dehydroquinate dehydratase | - |
| LB317_RS04125 (881943) | 881943..882482 | + | 540 | WP_031788106.1 | nitroreductase | - |
| LB317_RS04130 (882619) | 882619..882939 | - | 321 | WP_001147950.1 | thioredoxin family protein | - |
| LB317_RS04135 (883082) | 883082..883438 | + | 357 | WP_031788107.1 | arsenate reductase family protein | - |
| LB317_RS04140 (883596) | 883596..883976 | + | 381 | WP_000290488.1 | glycine cleavage system protein GcvH | - |
| LB317_RS04145 (884154) | 884154..885032 | + | 879 | WP_031788108.1 | YwqG family protein | - |
| LB317_RS04150 (885261) | 885261..885647 | + | 387 | WP_001018958.1 | toprim domain-containing protein | - |
| LB317_RS04155 (885640) | 885640..885936 | + | 297 | WP_031788109.1 | thioredoxin family protein | - |
| LB317_RS04160 (886187) | 886187..887212 | + | 1026 | WP_031788110.1 | Methionine import ATP-binding protein MetN 2 | VF |
| LB317_RS04165 (887205) | 887205..887900 | + | 696 | WP_000520228.1 | methionine ABC transporter permease | - |
| LB317_RS04170 (887918) | 887918..888739 | + | 822 | WP_031788111.1 | Methionine-binding lipoprotein MetQ | VF |
| LB317_RS04175 (889007) | 889007..889201 | + | 195 | WP_031788112.1 | CsbD family protein | - |
| LB317_RS04180 (889444) | 889444..890295 | - | 852 | WP_031788113.1 | DUF368 domain-containing protein | - |
| LB317_RS04185 (890622) | 890622..891383 | + | 762 | WP_000168845.1 | Fe-S cluster assembly ATPase SufC | - |
| LB317_RS04190 (891482) | 891482..892789 | + | 1308 | WP_031788114.1 | Fe-S cluster assembly protein SufD | - |
| LB317_RS04195 (892882) | 892882..894132 | + | 1251 | WP_239794174.1 | cysteine desulfurase | - |
| LB317_RS04200 (894122) | 894122..894586 | + | 465 | WP_001010511.1 | SUF system NifU family Fe-S cluster assembly protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|