MGE detailed information
MGE type: Prophage MGE length: 130892 bp
Accession: NZ_CP083701 Location: 2495926..2626817 Organism: Escherichia coli strain SUISSEKPC3NDM5 Replicon: chromosome
Accession: NZ_CP083701 Location: 2495926..2626817 Organism: Escherichia coli strain SUISSEKPC3NDM5 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| K9O95_RS12335 (2492912) | 2492912..2494555 | + | 1644 | WP_001300516.1 | fimbrial adhesin EcpD | - |
| K9O95_RS12340 (2494524) | 2494524..2495234 | + | 711 | WP_064221667.1 | fimbrial chaperone EcpE | - |
| K9O95_RS12345 (2495547) | 2495547..2495876 | + | 330 | WP_001303809.1 | YkgJ family cysteine cluster protein | - |
| K9O95_RS12350 (2496810) | 2496810..2496811 | - | 2 | WP_012767703.1 | IS3 family transposase IS150 | Transposase |
| K9O95_RS12355 (2497569) | 2497569..2498184 | - | 616 | Protein_2429 | YagU family protein | - |
| K9O95_RS12360 (2498602) | 2498602..2499291 | + | 690 | WP_000070699.1 | aldehyde dehydrogenase iron-sulfur subunit PaoA | - |
| K9O95_RS12365 (2499288) | 2499288..2500244 | + | 957 | WP_064221631.1 | aldehyde oxidoreductase FAD-binding subunit PaoB | - |
| K9O95_RS12370 (2500241) | 2500241..2502439 | + | 2199 | WP_118972012.1 | aldehyde oxidoreductase molybdenum-binding subunit PaoC | - |
| K9O95_RS12375 (2502449) | 2502449..2503405 | + | 957 | WP_000122395.1 | molybdenum cofactor insertion chaperone PaoD | - |
| K9O95_RS12380 (2503456) | 2503456..2503794 | + | 339 | Protein_2434 | LysR substrate-binding domain-containing protein | - |
| K9O95_RS12385 (2504193) | 2504193..2504972 | - | 780 | WP_052924176.1 | hypothetical protein | - |
| K9O95_RS12390 (2504973) | 2504973..2505800 | - | 828 | WP_000609023.1 | hypothetical protein | - |
| K9O95_RS12395 (2506293) | 2506293..2506820 | - | 528 | WP_072649949.1 | hypothetical protein | - |
| K9O95_RS12400 (2506920) | 2506920..2507192 | - | 273 | WP_001723130.1 | hypothetical protein | - |
| K9O95_RS12405 (2507189) | 2507189..2507356 | - | 168 | WP_001723129.1 | hypothetical protein | - |
| K9O95_RS12410 (2507372) | 2507372..2507572 | + | 201 | WP_024170960.1 | hypothetical protein | - |
| K9O95_RS12415 (2507635) | 2507635..2507958 | - | 324 | WP_016262937.1 | hypothetical protein | - |
| K9O95_RS12420 (2508023) | 2508023..2509165 | - | 1143 | WP_001723127.1 | hypothetical protein | - |
| K9O95_RS12425 (2509300) | 2509300..2509588 | - | 289 | Protein_2443 | PerC family transcriptional regulator | - |
| K9O95_RS12430 (2509585) | 2509585..2510115 | - | 531 | WP_001723124.1 | ProQ/FinO family protein | - |
| K9O95_RS12435 (2510497) | 2510497..2512302 | - | 1806 | WP_001723123.1 | primase-like DNA-binding domain-containing protein | - |
| K9O95_RS12440 (2512299) | 2512299..2512588 | - | 290 | Protein_2446 | DUF4222 domain-containing protein | - |
| K9O95_RS12445 (2512593) | 2512593..2512793 | - | 201 | WP_000551487.1 | hypothetical protein | - |
| K9O95_RS12450 (2512786) | 2512786..2513019 | - | 234 | WP_001204082.1 | hypothetical protein | - |
| K9O95_RS12455 (2513012) | 2513012..2513377 | - | 366 | WP_001723121.1 | hypothetical protein | - |
| K9O95_RS12460 (2513370) | 2513370..2513594 | - | 225 | WP_000335966.1 | hypothetical protein | - |
| K9O95_RS12465 (2513587) | 2513587..2514894 | - | 1308 | WP_075851460.1 | host cell division inhibitor Icd-like protein | - |
| K9O95_RS12470 (2514887) | 2514887..2515687 | - | 801 | WP_001515791.1 | antA/AntB antirepressor family protein | - |
| K9O95_RS12475 (2515765) | 2515765..2515962 | - | 198 | WP_000072422.1 | AlpA family transcriptional regulator | - |
| K9O95_RS12480 (2516190) | 2516190..2516987 | - | 798 | WP_000565286.1 | hypothetical protein | - |
| K9O95_RS12485 (2517116) | 2517116..2518330 | - | 1215 | WP_041329569.1 | hypothetical protein ; Integrase | Integrase |
| K9O95_RS12490 (2518934) | 2518934..2519899 | - | 966 | WP_000049501.1 | hypothetical protein | - |
| K9O95_RS12495 (2520567) | 2520567..2521781 | + | 1215 | WP_012602456.1 | type II restriction endonuclease | - |
| K9O95_RS12500 (2521816) | 2521816..2523249 | - | 1434 | WP_001288444.1 | DNA cytosine methyltransferase | - |
| K9O95_RS12505 (2523656) | 2523656..2524429 | + | 774 | WP_000355482.1 | hypothetical protein | - |
| K9O95_RS12510 (2524499) | 2524499..2524630 | - | 132 | Protein_2460 | tail fiber assembly protein | - |
| K9O95_RS12515 (2524682) | 2524682..2525659 | - | 978 | Protein_2461 | tail fiber domain-containing protein | - |
| K9O95_RS12520 (2527447) | 2527447..2528439 | - | 993 | Protein_2462 | prophage tail fiber N-terminal domain-containing protein | - |
| K9O95_RS12525 (2528504) | 2528504..2529103 | - | 600 | WP_023566733.1 | hypothetical protein | VF |
| K9O95_RS12530 (2529172) | 2529172..2532651 | - | 3480 | WP_191636375.1 | host specificity protein J | - |
| K9O95_RS12535 (2532712) | 2532712..2533284 | - | 573 | WP_001517847.1 | tail assembly protein | - |
| K9O95_RS12540 (2533281) | 2533281..2534024 | - | 744 | WP_072971412.1 | C40 family peptidase | - |
| K9O95_RS12545 (2534030) | 2534030..2534728 | - | 699 | WP_072971415.1 | phage minor tail protein L | - |
| K9O95_RS12550 (2534728) | 2534728..2535057 | - | 330 | WP_001494851.1 | phage tail protein | - |
| K9O95_RS12555 (2535054) | 2535054..2537654 | - | 2601 | WP_049290766.1 | phage tail tape measure protein | - |
| K9O95_RS12560 (2537647) | 2537647..2538081 | - | 435 | WP_000459458.1 | phage tail assembly protein T | - |
| K9O95_RS12565 (2538063) | 2538063..2538485 | - | 423 | WP_000479193.1 | phage minor tail protein G | - |
| K9O95_RS12570 (2538501) | 2538501..2539241 | - | 741 | WP_024250570.1 | phage tail protein | - |
| K9O95_RS12575 (2539249) | 2539249..2539644 | - | 396 | WP_000683145.1 | phage minor tail U family protein | - |
| K9O95_RS12580 (2539641) | 2539641..2540219 | - | 579 | WP_000985119.1 | phage tail protein | - |
| K9O95_RS12585 (2540231) | 2540231..2540584 | - | 354 | WP_000753001.1 | head-tail joining protein | - |
| K9O95_RS12590 (2540596) | 2540596..2540991 | - | 396 | WP_088224509.1 | DNA-packaging protein FI | - |
| K9O95_RS12595 (2541033) | 2541033..2542058 | - | 1026 | WP_029395141.1 | major capsid protein | - |
| K9O95_RS12600 (2542114) | 2542114..2542446 | - | 333 | WP_040092234.1 | head decoration protein | - |
| K9O95_RS12605 (2542456) | 2542456..2543775 | - | 1320 | WP_088224510.1 | S49 family peptidase | - |
| K9O95_RS12610 (2543756) | 2543756..2545357 | - | 1602 | WP_088224511.1 | phage portal protein | - |
| K9O95_RS12615 (2545354) | 2545354..2545560 | - | 207 | WP_000198149.1 | gpW family protein | - |
| K9O95_RS12620 (2545557) | 2545557..2547482 | - | 1926 | WP_001027292.1 | phage terminase large subunit family protein | - |
| K9O95_RS12625 (2547457) | 2547457..2547750 | - | 294 | Protein_2483 | DNA-packaging protein | - |
| K9O95_RS12630 (2547819) | 2547819..2548229 | + | 411 | WP_000079508.1 | DUF1398 family protein | - |
| K9O95_RS12635 (2548529) | 2548529..2548813 | + | 285 | WP_051631743.1 | serum resistance lipoprotein Bor | - |
| K9O95_RS12645 (2548845) | 2548845..2549303 | - | 459 | Protein_2486 | lysis protein | - |
| K9O95_RS12650 (2549300) | 2549300..2549737 | - | 438 | WP_224451458.1 | glycoside hydrolase family protein | - |
| K9O95_RS12655 (2549802) | 2549802..2550395 | + | 594 | WP_224451504.1 | TIGR04255 family protein | - |
| K9O95_RS12660 (2550411) | 2550411..2550755 | + | 345 | WP_125282403.1 | hypothetical protein | - |
| K9O95_RS12665 (2550759) | 2550759..2551373 | + | 615 | WP_000069422.1 | hypothetical protein | - |
| K9O95_RS12670 (2551399) | 2551399..2551743 | - | 345 | WP_106495050.1 | antiterminator Q family protein | - |
| K9O95_RS12675 (2551761) | 2551761..2552748 | - | 988 | Protein_2492 | DUF968 domain-containing protein | - |
| K9O95_RS12680 (2552756) | 2552756..2553553 | - | 798 | WP_001061404.1 | KilA-N domain-containing protein | - |
| K9O95_RS12685 (2553573) | 2553573..2553962 | - | 390 | WP_000767113.1 | RusA family crossover junction endodeoxyribonuclease | - |
| K9O95_RS12690 (2553959) | 2553959..2554285 | - | 327 | WP_000210170.1 | LexA family transcriptional regulator | - |
| K9O95_RS12695 (2554285) | 2554285..2554779 | - | 495 | WP_106495048.1 | PerC family transcriptional regulator | - |
| K9O95_RS12700 (2554776) | 2554776..2555717 | - | 942 | WP_001377815.1 | helix-turn-helix domain-containing protein | - |
| K9O95_RS12705 (2555707) | 2555707..2555886 | - | 180 | WP_001250269.1 | DUF4222 domain-containing protein | - |
| K9O95_RS12710 (2556062) | 2556062..2556619 | - | 558 | WP_000526668.1 | protein YmfL | - |
| K9O95_RS12715 (2556612) | 2556612..2556872 | - | 261 | WP_001191669.1 | helix-turn-helix transcriptional regulator | - |
| K9O95_RS12720 (2556970) | 2556970..2557662 | + | 693 | WP_001020632.1 | XRE family transcriptional regulator | - |
| K9O95_RS12725 (2558365) | 2558365..2558727 | + | 363 | WP_000135680.1 | protein YfdP | - |
| K9O95_RS12730 (2558793) | 2558793..2559617 | + | 825 | WP_106495044.1 | DUF2303 family protein | - |
| K9O95_RS12735 (2559745) | 2559745..2560281 | + | 537 | WP_000008200.1 | 5'-deoxynucleotidase | - |
| K9O95_RS12740 (2560272) | 2560272..2560634 | + | 363 | WP_001242749.1 | phage protein | - |
| K9O95_RS12745 (2560634) | 2560634..2560939 | + | 306 | WP_000206732.1 | protein YfdT | - |
| K9O95_RS12750 (2560939) | 2560939..2561289 | + | 351 | WP_000433939.1 | helix-turn-helix domain-containing protein | - |
| K9O95_RS12755 (2561211) | 2561211..2562329 | + | 1119 | WP_001132557.1 | Tyrosine recombinase XerD ; Integrase | Integrase |
| K9O95_RS12760 (2562555) | 2562555..2563874 | + | 1320 | WP_000144692.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| K9O95_RS12765 (2563967) | 2563967..2564815 | - | 849 | WP_001280510.1 | DUF4942 domain-containing protein | - |
| K9O95_RS12770 (2564900) | 2564900..2565097 | - | 198 | WP_000839267.1 | DUF957 domain-containing protein | - |
| K9O95_RS12775 (2565109) | 2565109..2565519 | - | 411 | Protein_2512 | DUF5983 family protein | - |
| K9O95_RS12780 (2565713) | 2565713..2567252 | + | 1540 | Protein_2513 | IS21 family transposase ISEc12 | Transposase |
| K9O95_RS12785 (2567267) | 2567267..2568012 | + | 746 | Protein_2514 | IS21 family transposase ISEc12 | Transposase |
| K9O95_RS12790 (2568097) | 2568097..2568180 | - | 84 | Protein_2515 | DUF5983 family protein | - |
| K9O95_RS12795 (2568177) | 2568177..2568554 | - | 378 | WP_000854726.1 | TA system toxin CbtA family protein | Toxin Detail |
| K9O95_RS12800 (2568644) | 2568644..2569012 | - | 369 | WP_070749977.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| K9O95_RS12805 (2569062) | 2569062..2569706 | - | 645 | Protein_2518 | antitoxin of toxin-antitoxin stability system | - |
| K9O95_RS12810 (2569721) | 2569721..2569942 | - | 222 | WP_000692353.1 | DUF987 domain-containing protein | - |
| K9O95_RS12815 (2570011) | 2570011..2570487 | - | 477 | WP_001186742.1 | RadC family protein | - |
| K9O95_RS12820 (2570501) | 2570501..2570980 | - | 480 | WP_000706976.1 | antirestriction protein | - |
| K9O95_RS12825 (2571074) | 2571074..2571319 | - | 246 | WP_000680584.1 | hypothetical protein | - |
| K9O95_RS12830 (2571319) | 2571319..2572137 | - | 819 | WP_070749978.1 | DUF932 domain-containing protein | - |
| K9O95_RS12835 (2572465) | 2572465..2575311 | - | 2847 | WP_176486894.1 | Ag43/Cah family autotransporter adhesin | - |
| K9O95_RS12840 (2575684) | 2575684..2576556 | - | 873 | WP_070751363.1 | GTPase family protein | - |
| K9O95_RS12845 (2576820) | 2576820..2578376 | + | 1557 | WP_000200813.1 | type I restriction-modification system subunit M | - |
| K9O95_RS12850 (2578373) | 2578373..2579599 | + | 1227 | WP_050019106.1 | restriction endonuclease subunit S | - |
| K9O95_RS12855 (2579721) | 2579721..2582837 | + | 3117 | WP_000149676.1 | HsdR family type I site-specific deoxyribonuclease | - |
| K9O95_RS12860 (2582985) | 2582985..2583887 | - | 903 | Protein_2529 | IS5 family transposase ISKpn26 | Transposase |
| K9O95_RS12865 (2583888) | 2583888..2584740 | + | 853 | Protein_2530 | SAM-dependent methyltransferase | - |
| K9O95_RS12870 (2584730) | 2584730..2585068 | + | 339 | WP_000090302.1 | hypothetical protein | - |
| K9O95_RS12875 (2585017) | 2585017..2585439 | + | 423 | Protein_2532 | IS3 family transposase ISLad1 | Transposase |
| K9O95_RS12880 (2585461) | 2585461..2585658 | + | 198 | WP_224451459.1 | DUF262 domain-containing protein | - |
| K9O95_RS12885 (2585636) | 2585636..2586916 | + | 1281 | WP_263481852.1 | DUF262 domain-containing protein | - |
| K9O95_RS12890 (2586909) | 2586909..2588951 | + | 2043 | WP_187803200.1 | DUF262 domain-containing protein | - |
| K9O95_RS12895 (2589138) | 2589138..2594873 | + | 5736 | WP_000108720.1 | DUF4011 domain-containing protein | - |
| K9O95_RS12900 (2595094) | 2595094..2595552 | - | 459 | Protein_2537 | IS3 family transposase ISEc14 | Transposase |
| K9O95_RS12905 (2595633) | 2595633..2597095 | - | 1463 | Protein_2538 | reverse transcriptase domain-containing protein | - |
| K9O95_RS12910 (2597134) | 2597134..2597298 | - | 165 | WP_185955043.1 | hypothetical protein | - |
| K9O95_RS12915 (2597767) | 2597767..2598505 | - | 739 | Protein_2540 | IS3 family transposase | - |
| K9O95_RS12920 (2598756) | 2598756..2599271 | - | 516 | WP_000523728.1 | PTS glucose transporter subunit IIA | - |
| K9O95_RS12925 (2599335) | 2599335..2600765 | - | 1431 | WP_000813683.1 | glycoside hydrolase family 32 protein | - |
| K9O95_RS12930 (2600762) | 2600762..2602040 | - | 1279 | Protein_2543 | MFS transporter | - |
| K9O95_RS12935 (2602095) | 2602095..2604221 | - | 2127 | WP_000433621.1 | alpha-galactosidase | - |
| K9O95_RS12940 (2604315) | 2604315..2605325 | - | 1011 | WP_000053329.1 | substrate-binding domain-containing protein | - |
| K9O95_RS12945 (2605698) | 2605698..2605864 | - | 167 | Protein_2546 | transposase domain-containing protein | - |
| K9O95_RS12950 (2605978) | 2605978..2606268 | - | 291 | WP_024198648.1 | hypothetical protein | - |
| K9O95_RS12955 (2606572) | 2606572..2607111 | - | 540 | Protein_2548 | inovirus Gp2 family protein | - |
| K9O95_RS12960 (2607161) | 2607161..2607858 | + | 698 | WP_224451460.1 | IS1 family transposase IS1G | Transposase |
| K9O95_RS12965 (2607968) | 2607968..2608806 | - | 839 | Protein_2550 | hypothetical protein | ARG |
| K9O95_RS12970 (2608919) | 2608919..2609749 | - | 831 | WP_118972044.1 | hypothetical protein | ARG |
| K9O95_RS12975 (2609959) | 2609959..2610258 | + | 300 | Protein_2552 | hypothetical protein | VF |
| K9O95_RS12980 (2610259) | 2610259..2610612 | + | 354 | Protein_2553 | hypothetical protein | VF |
| K9O95_RS12985 (2610921) | 2610921..2612300 | + | 1380 | Protein_2554 | IS91 family transposase ISVsa3 | Transposase |
| K9O95_RS12990 (2612626) | 2612626..2612994 | + | 369 | WP_001470701.1 | mechanosensitive ion channel | - |
| K9O95_RS12995 (2613022) | 2613022..2614563 | - | 1542 | WP_109638756.1 | hypothetical protein | ARG |
| K9O95_RS13000 (2614961) | 2614961..2615971 | + | 1011 | Protein_2557 | IS91 family transposase ISAzo26 | Transposase |
| K9O95_RS13005 (2616179) | 2616179..2616529 | + | 351 | WP_000454193.1 | IS91 family transposase ISAzo26 | Transposase |
| K9O95_RS13010 (2616655) | 2616655..2617215 | + | 561 | WP_000147567.1 | Tn3 family transposase TnpR_TnAs3 | Transposase |
| K9O95_RS13015 (2617218) | 2617218..2620184 | + | 2967 | WP_001138064.1 | Tn3 family transposase TnpA_TnAs3 | Transposase |
| K9O95_RS13020 (2620251) | 2620251..2620628 | + | 378 | WP_000656305.1 | GNAT family N-acetyltransferase | - |
| K9O95_RS13025 (2620829) | 2620829..2621488 | - | 660 | WP_000412211.1 | hypothetical protein | ARG |
| K9O95_RS13030 (2621767) | 2621767..2622464 | + | 698 | WP_095033700.1 | IS1 family transposase IS1R | Transposase |
| K9O95_RS13035 (2622581) | 2622581..2622906 | - | 326 | Protein_2564 | DEAD/DEAH box helicase | - |
| K9O95_RS13040 (2623046) | 2623046..2623609 | - | 564 | WP_000282095.1 | inovirus-type Gp2 protein | - |
| K9O95_RS13045 (2624575) | 2624575..2626008 | - | 1434 | WP_000335705.1 | YfjI family protein | - |
| K9O95_RS13050 (2626260) | 2626260..2626484 | - | 225 | Protein_2567 | YfjI family protein | - |
| K9O95_RS13055 (2626590) | 2626590..2626817 | - | 228 | WP_000266638.1 | AlpA family phage regulatory protein | - |
| K9O95_RS13060 (2627508) | 2627508..2629139 | + | 1632 | WP_070749884.1 | hypothetical protein | - |
| K9O95_RS13065 (2629232) | 2629232..2629827 | - | 596 | Protein_2570 | hypothetical protein | - |
| K9O95_RS13075 (2630328) | 2630328..2631581 | - | 1254 | WP_000893278.1 | glutamate-5-semialdehyde dehydrogenase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|