MGE detailed information
MGE type: Genomic_island MGE length: 20029 bp
Accession: NZ_CP083610 Location: 818925..838953 Organism: Escherichia coli strain EC2648-Vir1 Replicon: chromosome
Accession: NZ_CP083610 Location: 818925..838953 Organism: Escherichia coli strain EC2648-Vir1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LAJ48_RS03985 (814404) | 814404..814907 | - | 504 | WP_072647342.1 | type 1 fimbria minor subunit FimG | - |
| LAJ48_RS03990 (814920) | 814920..815450 | - | 531 | WP_001244827.1 | type 1 fimbria minor subunit FimF | - |
| LAJ48_RS03995 (815460) | 815460..818096 | - | 2637 | WP_000121005.1 | fimbrial usher FimD | - |
| LAJ48_RS04000 (818163) | 818163..818888 | - | 726 | WP_000066547.1 | type 1 fimbria chaperone FimC | - |
| LAJ48_RS04005 (818925) | 818925..819464 | - | 540 | WP_000824114.1 | fimbrial protein | - |
| LAJ48_RS04010 (819529) | 819529..820077 | - | 549 | WP_000695564.1 | type 1 fimbrial major subunit FimA | - |
| LAJ48_RS04015 (820559) | 820559..821113 | - | 555 | WP_000983104.1 | type 1 fimbria switch DNA invertase FimE | - |
| LAJ48_RS04025 (822409) | 822409..823011 | - | 603 | WP_000790583.1 | type 1 fimbria switch DNA invertase FimB | - |
| LAJ48_RS04030 (824467) | 824467..825183 | + | 717 | WP_001295734.1 | N-acetylneuraminic acid outer membrane channel NanC | - |
| LAJ48_RS04035 (825203) | 825203..826309 | + | 1107 | WP_001309184.1 | N-acetylneuraminate epimerase | - |
| LAJ48_RS04040 (826374) | 826374..827354 | + | 981 | WP_000991438.1 | 9-O-acetyl-N-acetylneuraminic acid deacetylase | - |
| LAJ48_RS04045 (827464) | 827464..827669 | + | 206 | Protein_795 | HNH endonuclease | - |
| LAJ48_RS04050 (827937) | 827937..829177 | - | 1241 | Protein_796 | helicase YjhR | - |
| LAJ48_RS04055 (829293) | 829293..829424 | + | 132 | WP_001309182.1 | hypothetical protein | - |
| LAJ48_RS04060 (829915) | 829915..830172 | + | 258 | WP_001054376.1 | YjhX family toxin | Toxin Detail |
| LAJ48_RS04065 (830184) | 830184..830729 | + | 546 | WP_001309181.1 | N-acetyltransferase | Antitoxin Detail |
| LAJ48_RS04070 (830785) | 830785..831531 | + | 747 | WP_000354251.1 | class I SAM-dependent methyltransferase | - |
| LAJ48_RS04075 (831700) | 831700..831918 | + | 219 | Protein_801 | hypothetical protein | - |
| LAJ48_RS04080 (831956) | 831956..832072 | + | 117 | Protein_802 | VOC family protein | - |
| LAJ48_RS04085 (832317) | 832317..833438 | + | 1122 | WP_000010829.1 | M42 family metallopeptidase | - |
| LAJ48_RS04090 (833435) | 833435..833713 | + | 279 | WP_000722973.1 | PTS sugar transporter subunit IIB SgcB | - |
| LAJ48_RS04095 (833725) | 833725..835038 | + | 1314 | WP_000460843.1 | PTS sugar transporter subunit IIC SgcC | - |
| LAJ48_RS04100 (835051) | 835051..835857 | + | 807 | WP_000118626.1 | BtpA family protein SgcQ | - |
| LAJ48_RS04105 (835988) | 835988..836419 | + | 432 | WP_000606406.1 | SgcA family PTS sugar transporter subunit IIA | - |
| LAJ48_RS04110 (836431) | 836431..837063 | + | 633 | WP_000600622.1 | ribulose-phosphate 3 epimerase family protein | - |
| LAJ48_RS04115 (837080) | 837080..837862 | + | 783 | WP_000082780.1 | DeoR/GlpR family DNA-binding transcription regulator | - |
| LAJ48_RS04120 (838165) | 838165..838953 | + | 789 | WP_000251798.1 | IclR family transcriptional regulator | - |
| LAJ48_RS04125 (838958) | 838958..839863 | + | 906 | WP_000714563.1 | dihydrodipicolinate synthase family protein | - |
| LAJ48_RS04130 (839874) | 839874..841841 | + | 1968 | WP_000116326.1 | xylonate dehydratase YjhG | - |
| LAJ48_RS04135 (841948) | 841948..843297 | + | 1350 | WP_001128363.1 | GntP family permease | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|