NZ_CP0836103768480..3781289

MGE detailed information

MGE type: Genomic_island        MGE length: 12810 bp
Accession: NZ_CP083610        Location: 3768480..3781289         Organism: Escherichia coli strain EC2648-Vir1       Replicon: chromosome


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
LAJ48_RS18245 (3768480) 3768480..3768746 + 267 WP_001301023.1 type II toxin-antitoxin system antitoxin HipB Antitoxin Detail
LAJ48_RS18250 (3768746) 3768746..3770068 + 1323 WP_001125439.1 type II toxin-antitoxin system serine/threonine protein kinase toxin HipA Toxin Detail
LAJ48_RS18255 (3770380) 3770380..3770588 + 209 Protein_3570 AraC family transcriptional regulator -
LAJ48_RS18260 (3770843) 3770843..3772069 + 1227 Protein_3571 fimbria/pilus outer membrane usher protein -
LAJ48_RS18265 (3772083) 3772083..3772613 + 531 WP_000876763.1 fimbrial protein -
LAJ48_RS18270 (3772626) 3772626..3773129 + 504 WP_000825452.1 fimbrial protein -
LAJ48_RS18275 (3773188) 3773188..3774102 + 915 WP_000520676.1 fimbrial protein -
LAJ48_RS18280 (3774436) 3774436..3776715 + 2280 WP_000726691.1 acid resistance putative oxidoreductase YdeP -
LAJ48_RS18285 (3776963) 3776963..3777160 + 198 WP_000543384.1 two-component system connector SafA -
LAJ48_RS18290 (3777235) 3777235..3777996 + 762 WP_000060495.1 acid stress response transcriptional regulator YdeO -
LAJ48_RS18295 (3778398) 3778398..3780080 + 1683 WP_001295684.1 sulfatase -
LAJ48_RS18300 (3780132) 3780132..3781289 + 1158 WP_001301030.1 anaerobic sulfatase maturase -
LAJ48_RS18305 (3781255) 3781255..3781377 - 123 WP_120795387.1 protein YneP -
LAJ48_RS18310 (3781580) 3781580..3783265 + 1686 WP_072647341.1 ABC transporter ATP-binding protein/permease -
LAJ48_RS18315 (3783303) 3783303..3785675 + 2373 WP_000832437.1 TonB-dependent receptor plug domain-containing protein -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance
Escherichia coli K-12 strain ER3413 Genomic island TA20025 CP009789 1561271..1572871 0.003
Escherichia coli str. K-12 substr. MC4100 Genomic island TA20066 HG738867 1469371..1480971 0.003
Escherichia coli str. K-12 substr. MG1655 Genomic island TA1040 NC_000913 1580842..1592442 0.003
Escherichia coli str. K-12 substr. W3110 Genomic island TA21437 NC_007779 1582556..1594156 0.003
Escherichia coli HS Genomic island TA22421 NC_009800 1597665..1609265 0.005
Escherichia coli str. K-12 substr. DH10B Genomic island TA22685 NC_010473 1669461..1680091 0.005
Escherichia coli BW2952 Genomic island TA23853 NC_012759 1470925..1482525 0.003
Escherichia coli DH1 Genomic island TA27403 NC_017638 1563024..1574624 0.003
Escherichia coli str. K-12 substr. MDS42 Genomic island TA29002 NC_020518 1287669..1299269 0.003
Escherichia coli BW25113 Genomic island TA48682 NZ_CP009273 1575099..1586699 0.003
Escherichia coli str. K-12 substr. W3110 strain K-12 substr. ZK126 Genomic island TA68424 NZ_CP017979 1484612..1496212 0.003
Escherichia coli strain DH5alpha Genomic island TA90478 NZ_CP025520 438284..449884 0.003
Escherichia coli str. K-12 substr. MC4100 strain K-12 Genomic island TA285016 NZ_HG738867 1469371..1480971 0.003