MGE detailed information
MGE type: Prophage MGE length: 39826 bp
Accession: NZ_CP083585 Location: 1971653..2011478 Organism: Escherichia coli strain ECNB21-M121 Replicon: chromosome
Accession: NZ_CP083585 Location: 1971653..2011478 Organism: Escherichia coli strain ECNB21-M121 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LA372_RS09440 () | 1967304..1969076 | + | 1773 | WP_001258660.1 | aspartate--tRNA ligase | - |
| LA372_RS09445 () | 1969194..1969646 | + | 453 | WP_001300367.1 | dihydroneopterin triphosphate diphosphatase | - |
| LA372_RS09450 () | 1969675..1970415 | + | 741 | WP_000907248.1 | YebC/PmpR family DNA-binding transcriptional regulator | - |
| LA372_RS09455 () | 1970450..1970971 | + | 522 | WP_001295503.1 | crossover junction endodeoxyribonuclease RuvC | - |
| LA372_RS09460 () | 1970973..1971575 | - | 603 | WP_047624035.1 | YebB family permuted papain-like enzyme | - |
| LA372_RS09465 () | 1971653..1972350 | + | 698 | WP_103215986.1 | IS1 family transposase IS1R | Transposase |
| LA372_RS09470 () | 1972422..1972487 | + | 66 | WP_010723105.1 | stress response small protein YobI | - |
| LA372_RS09475 () | 1972626..1973237 | + | 612 | WP_000580323.1 | Holliday junction branch migration protein RuvA | - |
| LA372_RS09480 () | 1973246..1974256 | + | 1011 | WP_000568519.1 | Holliday junction branch migration DNA helicase RuvB | - |
| LA372_RS09485 () | 1974502..1975287 | - | 786 | WP_000571471.1 | High-affinity zinc uptake system membrane protein ZnuB | VF |
| LA372_RS09490 () | 1975284..1976039 | - | 756 | WP_000202996.1 | Zinc import ATP-binding protein ZnuC | VF |
| LA372_RS09495 () | 1976118..1977050 | + | 933 | WP_047624030.1 | zinc ABC transporter substrate-binding protein ZnuA | - |
| LA372_RS09500 () | 1977066..1978388 | + | 1323 | WP_001184045.1 | murein DD-endopeptidase MepM | - |
| LA372_RS09505 () | 1978508..1979479 | + | 972 | WP_023308058.1 | Lipid A biosynthesis myristoyltransferase | VF |
| LA372_RS09510 () | 1979610..1981052 | - | 1443 | WP_000091148.1 | pyruvate kinase | - |
| LA372_RS09515 () | 1981180..1982049 | - | 870 | WP_001056694.1 | DNA-binding transcriptional regulator HexR | - |
| LA372_RS09520 () | 1982387..1983862 | + | 1476 | WP_000301720.1 | glucose-6-phosphate dehydrogenase | - |
| LA372_RS09525 () | 1984097..1985908 | + | 1812 | WP_001069467.1 | phosphogluconate dehydratase | - |
| LA372_RS09530 () | 1985945..1986586 | + | 642 | WP_000800512.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| LA372_RS09535 () | 1986642..1987820 | - | 1179 | WP_000173474.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| LA372_RS09540 () | 1987954..1988244 | + | 291 | WP_000257738.1 | DNA damage-inducible protein YebG | - |
| LA372_RS09545 () | 1988311..1988667 | + | 357 | WP_024257732.1 | protein YebF | - |
| LA372_RS09550 () | 1988994..1989653 | + | 660 | WP_000024746.1 | tellurite resistance TerB family protein | - |
| LA372_RS09555 () | 1989862..1991922 | + | 2061 | WP_032207799.1 | oligopeptidase B | - |
| LA372_RS09560 () | 1991919..1992581 | - | 663 | WP_000944256.1 | exodeoxyribonuclease X | - |
| LA372_RS09565 () | 1992605..1993261 | - | 657 | WP_000011660.1 | carbon-nitrogen hydrolase family protein YobB | - |
| LA372_RS09570 () | 1993363..1993593 | - | 231 | WP_000916763.1 | DNA polymerase III subunit theta | - |
| LA372_RS09575 () | 1993732..1994106 | + | 375 | WP_000168747.1 | CopC domain-containing protein YobA | - |
| LA372_RS09580 () | 1994110..1994982 | + | 873 | WP_047623971.1 | copper homeostasis membrane protein CopD | - |
| LA372_RS09585 () | 1994995..1995336 | + | 342 | WP_000976472.1 | YebY family protein | - |
| - | 1995364..1995635 | - | 272 | - | - | Antitoxin Detail |
| - | 1995494..1995597 | + | 104 | - | - | Toxin Detail |
| LA372_RS09590 () | 1995732..1996388 | + | 657 | WP_047623972.1 | protein-serine/threonine phosphatase | - |
| LA372_RS09595 () | 1996389..1996580 | - | 192 | WP_001296140.1 | YebW family protein | - |
| LA372_RS09600 () | 1996685..1996921 | - | 237 | WP_047623973.1 | YebV family protein | - |
| LA372_RS09605 () | 1997039..1998478 | - | 1440 | WP_047624031.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| LA372_RS09610 () | 1998558..2001191 | - | 2634 | WP_001297532.1 | hypothetical protein | VF |
| LA372_RS09615 () | 2001160..2002443 | - | 1284 | WP_001207282.1 | membrane integrity lipid transport subunit YebS | - |
| LA372_RS09620 () | 2002573..2003070 | + | 498 | WP_001043882.1 | L-methionine (R)-S-oxide reductase | - |
| LA372_RS09625 () | 2003167..2003865 | + | 699 | WP_000431368.1 | RNA chaperone ProQ | - |
| LA372_RS09630 () | 2003885..2005933 | + | 2049 | WP_001055778.1 | carboxy terminal-processing peptidase | - |
| LA372_RS09635 () | 2006125..2007006 | + | 882 | WP_000984517.1 | protease HtpX | - |
| LA372_RS09640 () | 2007055..2008428 | - | 1374 | WP_224205031.1 | MFS transporter | - |
| LA372_RS09645 () | 2008605..2009396 | + | 792 | WP_001262182.1 | DNA-binding transcriptional regulator KdgR | - |
| LA372_RS09650 () | 2009540..2009779 | - | 240 | WP_001211011.1 | YobH family protein | - |
| LA372_RS09655 () | 2009938..2010081 | + | 144 | WP_000714550.1 | PhoP/PhoQ regulator MgrB | - |
| LA372_RS09660 () | 2010156..2010443 | + | 288 | WP_001006862.1 | YebO family protein | - |
| LA372_RS09665 () | 2011113..2011256 | + | 144 | WP_001295496.1 | DUF2627 domain-containing protein | - |
| LA372_RS09670 () | 2011269..2011478 | + | 210 | WP_001062678.1 | transcription antiterminator/RNA stability regulator CspE | - |
| LA372_RS09675 () | 2011644..2012453 | + | 810 | WP_000010130.1 | 23S rRNA (guanine(745)-N(1))-methyltransferase | - |
| LA372_RS09680 () | 2012450..2013016 | - | 567 | WP_001296134.1 | manganese efflux pump MntP | - |
| LA372_RS09685 () | 2013446..2013904 | - | 459 | WP_000156258.1 | DUF986 family protein | - |
| LA372_RS09690 () | 2013959..2014810 | - | 852 | WP_000228655.1 | PTS mannose transporter subunit IID | - |
| LA372_RS09695 () | 2014823..2015623 | - | 801 | WP_000406926.1 | PTS mannose transporter subunit IIC | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|