MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 39414 bp
Accession: NZ_CP083576 Location: 1..39414 Organism: Xanthomonas phaseoli pv. manihotis strain CHN01 Replicon: plasmid pXAM38
Accession: NZ_CP083576 Location: 1..39414 Organism: Xanthomonas phaseoli pv. manihotis strain CHN01 Replicon: plasmid pXAM38
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| K9838_RS21910 (K9838_21900) | 81..713 | + | 633 | WP_007966093.1 | ParA family protein | - |
| K9838_RS21915 (K9838_21905) | 706..1038 | + | 333 | WP_007966095.1 | hypothetical protein | - |
| K9838_RS21920 (K9838_21910) | 1105..1389 | + | 285 | WP_017154887.1 | hypothetical protein | - |
| K9838_RS21925 (K9838_21915) | 1396..2583 | + | 1188 | WP_011153908.1 | zeta toxin family protein | - |
| K9838_RS21930 (K9838_21920) | 3102..3644 | + | 543 | Protein_4 | IS21 family transposase ISRme20 | Transposase |
| K9838_RS21935 (K9838_21925) | 3706..4862 | + | 1157 | WP_087941898.1 | IS3 family transposase ISXc8 | Transposase |
| K9838_RS21940 (K9838_21930) | 4869..5348 | + | 480 | Protein_6 | IS21 family transposase ISRme20 | Transposase |
| K9838_RS21945 (K9838_21935) | 5348..6148 | + | 801 | WP_229014476.1 | IS21 family transposase ISRme20 | Transposase |
| K9838_RS21950 (K9838_21940) | 6950..7930 | + | 981 | WP_007962146.1 | IS5 family transposase IS1646 | Transposase |
| K9838_RS21955 (K9838_21945) | 8113..11822 | - | 3710 | Protein_9 | type III secretion system effector avirulence protein AvrBs3 | - |
| K9838_RS21960 (K9838_21950) | 12207..12491 | + | 285 | WP_017163111.1 | hypothetical protein | - |
| K9838_RS21965 (K9838_21955) | 12508..12861 | - | 354 | WP_017154897.1 | hypothetical protein | - |
| K9838_RS21970 (K9838_21960) | 12909..13604 | - | 696 | WP_017154898.1 | StbB family protein | - |
| K9838_RS21975 (K9838_21965) | 13613..14059 | - | 447 | WP_017154899.1 | hypothetical protein | - |
| K9838_RS21980 (K9838_21970) | 14417..14812 | + | 396 | WP_017163112.1 | hypothetical protein | - |
| K9838_RS21985 (K9838_21975) | 14812..15000 | + | 189 | WP_017163113.1 | hypothetical protein | - |
| K9838_RS21990 (K9838_21980) | 15004..16578 | + | 1575 | WP_017171346.1 | type IV secretion system DNA-binding domain-containing protein | - |
| K9838_RS21995 (K9838_21985) | 16601..19576 | + | 2976 | WP_017163114.1 | Multifunctional conjugation protein TraI | Relaxase |
| K9838_RS22000 (K9838_21990) | 19633..19959 | - | 327 | WP_017157754.1 | type II toxin-antitoxin system PemK/MazF family toxin | Toxin Detail |
| K9838_RS22005 (K9838_21995) | 19956..20126 | - | 171 | WP_017157755.1 | antitoxin MazE family protein | Antitoxin Detail |
| K9838_RS22010 (K9838_22000) | 20371..20652 | + | 282 | WP_017157756.1 | DUF1778 domain-containing protein | - |
| K9838_RS22015 (K9838_22005) | 20649..21146 | + | 498 | WP_017157757.1 | GNAT family N-acetyltransferase | - |
| K9838_RS22020 (K9838_22010) | 21519..22559 | + | 1041 | WP_033480827.1 | IS21 family transposase ISRme20 | Transposase |
| K9838_RS22025 (K9838_22015) | 22559..23359 | + | 801 | WP_134979638.1 | IS21 family transposase ISRme20 | Transposase |
| K9838_RS22030 (K9838_22020) | 23645..24058 | - | 414 | WP_017163243.1 | hypothetical protein | - |
| K9838_RS22035 (K9838_22025) | 24069..24644 | - | 576 | WP_017157760.1 | Phospholipase D | VF |
| K9838_RS22040 (K9838_22030) | 24687..25274 | - | 588 | WP_017157761.1 | hypothetical protein | - |
| K9838_RS22045 (K9838_22035) | 25320..26207 | - | 888 | WP_017163244.1 | Type IV secretion system protein virB1 | VF |
| K9838_RS22050 (K9838_22040) | 26218..27240 | - | 1023 | WP_007968768.1 | Type IV secretion system protein VirB11 | VF |
| K9838_RS22055 (K9838_22045) | 27251..28471 | - | 1221 | WP_017158380.1 | Type IV secretion system protein virB10 | VF |
| K9838_RS22060 (K9838_22050) | 28473..29255 | - | 783 | WP_229014475.1 | Type IV secretion system protein virB9 | VF |
| K9838_RS22065 (K9838_22055) | 29280..29954 | - | 675 | WP_007968762.1 | type IV secretion system protein | - |
| K9838_RS22070 (K9838_22060) | 29951..30811 | - | 861 | WP_017157767.1 | type IV secretion system protein | - |
| K9838_RS22075 (K9838_22065) | 30813..31202 | - | 390 | WP_017158381.1 | hypothetical protein | - |
| K9838_RS22080 (K9838_22070) | 31195..31413 | - | 219 | WP_017157769.1 | hypothetical protein | - |
| K9838_RS22085 (K9838_22075) | 31460..32128 | - | 669 | WP_017157770.1 | type IV secretion system protein | - |
| K9838_RS22090 (K9838_22080) | 32125..34755 | - | 2631 | WP_017163561.1 | Type IV secretion system protein virB4 | VF |
| K9838_RS22095 (K9838_22085) | 34778..35077 | - | 300 | WP_017163560.1 | VirB3 family type IV secretion system protein | - |
| K9838_RS22100 (K9838_22090) | 35074..35445 | - | 372 | WP_007974938.1 | TrbC/VirB2 family protein | - |
| K9838_RS22105 (K9838_22095) | 35473..35763 | - | 291 | WP_017158353.1 | hypothetical protein | - |
| K9838_RS22110 (K9838_22100) | 36075..36467 | + | 393 | WP_017159871.1 | hypothetical protein | - |
| K9838_RS22115 (K9838_22105) | 36982..37800 | + | 819 | WP_033477716.1 | hypothetical protein | - |
| K9838_RS22120 (K9838_22110) | 38774..39382 | + | 609 | WP_017154888.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|