MGE detailed information
MGE type: Prophage MGE length: 56534 bp
Accession: NZ_CP083503 Location: 566677..623210 Organism: Escherichia coli strain elppa5 Replicon: chromosome
Accession: NZ_CP083503 Location: 566677..623210 Organism: Escherichia coli strain elppa5 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| K9U08_RS02845 (561753) | 561753..563198 | - | 1446 | WP_001523161.1 | p-aminobenzoyl-glutamate hydrolase subunit AbgB | - |
| K9U08_RS02850 (563198) | 563198..564508 | - | 1311 | WP_001523163.1 | p-aminobenzoyl-glutamate hydrolase subunit AbgA | - |
| K9U08_RS02855 (564684) | 564684..565592 | + | 909 | WP_000885457.1 | LysR family transcriptional regulator | - |
| K9U08_RS02860 (565765) | 565765..566580 | - | 816 | WP_000156573.1 | helix-turn-helix transcriptional regulator | - |
| K9U08_RS02865 (566677) | 566677..567705 | + | 1029 | WP_001523164.1 | hypothetical protein | VF |
| K9U08_RS02870 (567702) | 567702..569216 | + | 1515 | WP_020233354.1 | DHA2 family efflux MFS transporter permease subunit | - |
| K9U08_RS02875 (569411) | 569411..569974 | + | 564 | WP_001046832.1 | DNA endonuclease SmrA | - |
| K9U08_RS02880 (569995) | 569995..570942 | - | 948 | WP_100190652.1 | sensor domain-containing diguanylate cyclase | - |
| K9U08_RS02885 (570992) | 570992..571689 | + | 698 | WP_094106546.1 | IS1 family transposase | - |
| K9U08_RS02890 (571705) | 571705..572004 | - | 300 | Protein_567 | sensor domain-containing diguanylate cyclase | - |
| K9U08_RS02895 (572198) | 572198..572245 | + | 48 | WP_211180494.1 | protein YnaN | - |
| K9U08_RS02900 (572259) | 572259..573242 | + | 984 | WP_000387388.1 | zinc transporter ZntB | - |
| K9U08_RS02905 (573720) | 573720..575093 | + | 1374 | WP_000123748.1 | ATP-dependent RNA helicase DbpA | - |
| K9U08_RS02910 (575222) | 575222..576157 | - | 936 | WP_001523172.1 | tRNA 2-thiocytidine(32) synthetase TtcA | - |
| K9U08_RS02915 (576209) | 576209..577444 | - | 1236 | WP_000040839.1 | Vitamin B12 import ATP-binding protein BtuD ; Integrase | Integrase |
| K9U08_RS02920 (577446) | 577446..577661 | - | 216 | WP_000079604.1 | excisionase XisR | - |
| - (577765) | 577765..577943 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - (577765) | 577765..577943 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - (577765) | 577765..577943 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - (577765) | 577765..577943 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| K9U08_RS02925 (577761) | 577761..577949 | - | 189 | WP_001302840.1 | DUF1187 family protein | - |
| K9U08_RS02930 (577987) | 577987..578136 | - | 150 | WP_001443846.1 | type I toxin-antitoxin system endodeoxyribonuclease toxin RalR | Toxin Detail |
| K9U08_RS02935 (578192) | 578192..579001 | - | 810 | WP_000166313.1 | recombination protein RecT | - |
| K9U08_RS02940 (578994) | 578994..581594 | - | 2601 | WP_000105140.1 | exodeoxyribonuclease VIII | - |
| K9U08_RS02945 (581696) | 581696..581971 | - | 276 | WP_001344816.1 | hypothetical protein | - |
| K9U08_RS02950 (582046) | 582046..582216 | - | 171 | WP_001352098.1 | YdaE family protein | - |
| K9U08_RS02955 (582216) | 582216..582437 | - | 222 | WP_000560223.1 | killing protein KilR | - |
| K9U08_RS02960 (582879) | 582879..583367 | + | 489 | WP_001312793.1 | superinfection exclusion B family protein | - |
| K9U08_RS02965 (583364) | 583364..583519 | - | 156 | WP_001169151.1 | YdaF family protein | - |
| K9U08_RS02970 (583530) | 583530..583709 | - | 180 | WP_001326317.1 | hypothetical protein | - |
| K9U08_RS02975 (583952) | 583952..584371 | - | 420 | WP_000233319.1 | helix-turn-helix domain-containing protein | - |
| K9U08_RS02980 (584451) | 584451..584705 | + | 255 | WP_001072342.1 | hypothetical protein | - |
| K9U08_RS02985 (584702) | 584702..585124 | + | 423 | WP_000693803.1 | toxin YdaT family protein | - |
| K9U08_RS02990 (585202) | 585202..585990 | + | 789 | WP_001396581.1 | hypothetical protein | - |
| K9U08_RS02995 (585997) | 585997..586743 | + | 747 | WP_020233967.1 | ATP-binding protein | - |
| K9U08_RS03000 (586766) | 586766..587527 | + | 762 | WP_000450716.1 | DUF1627 domain-containing protein | - |
| K9U08_RS03005 (587543) | 587543..587965 | + | 423 | WP_029702111.1 | DUF977 family protein | - |
| K9U08_RS03010 (588127) | 588127..588630 | + | 504 | WP_000137958.1 | hypothetical protein | - |
| K9U08_RS03015 (588751) | 588751..589524 | - | 774 | WP_000200358.1 | KilA-N domain-containing protein | - |
| K9U08_RS03020 (590047) | 590047..590172 | + | 126 | WP_001445775.1 | Hok/Gef family protein | - |
| K9U08_RS03025 (590255) | 590255..590596 | - | 342 | WP_001445776.1 | DUF1971 domain-containing protein | - |
| K9U08_RS03030 (591464) | 591464..592063 | + | 600 | WP_000940344.1 | DUF1367 family protein | - |
| K9U08_RS03035 (592063) | 592063..592353 | + | 291 | WP_000228032.1 | DUF1364 domain-containing protein | - |
| K9U08_RS03040 (592350) | 592350..592892 | + | 543 | WP_000640106.1 | DUF1133 family protein | - |
| K9U08_RS03045 (593114) | 593114..593683 | + | 570 | WP_001208722.1 | hypothetical protein | - |
| K9U08_RS03050 (593652) | 593652..593867 | - | 216 | WP_152948782.1 | hypothetical protein | - |
| K9U08_RS03055 (594031) | 594031..594372 | + | 342 | WP_000781775.1 | phage holin, lambda family | - |
| K9U08_RS03060 (594376) | 594376..594852 | + | 477 | WP_023153991.1 | glycoside hydrolase family protein | - |
| K9U08_RS03065 (595069) | 595069..595254 | + | 186 | WP_001228696.1 | prophage lysis lipoprotein RzoD | - |
| K9U08_RS03075 (595451) | 595451..596908 | + | 1458 | WP_001097895.1 | Trk system potassium transporter TrkG | - |
| K9U08_RS26295 (597046) | 597046..597837 | + | 792 | WP_001291105.1 | ParB/Srx family N-terminal domain-containing protein | - |
| K9U08_RS03085 (597830) | 597830..598762 | + | 933 | WP_020233805.1 | hypothetical protein | - |
| K9U08_RS03090 (598740) | 598740..598949 | + | 210 | WP_000126788.1 | hypothetical protein | - |
| K9U08_RS03095 (598953) | 598953..600047 | + | 1095 | WP_000089448.1 | terminase small subunit | - |
| K9U08_RS03100 (600028) | 600028..601329 | + | 1302 | WP_000625348.1 | terminase family protein | - |
| K9U08_RS03105 (601332) | 601332..602738 | + | 1407 | WP_000763701.1 | DUF4055 domain-containing protein | - |
| K9U08_RS03110 (602722) | 602722..603834 | + | 1113 | WP_001363932.1 | phage minor head protein | - |
| K9U08_RS03115 (603939) | 603939..604703 | + | 765 | WP_029702112.1 | hypothetical protein | - |
| K9U08_RS03120 (604802) | 604802..605941 | + | 1140 | WP_020233804.1 | P22 phage major capsid protein family protein | - |
| K9U08_RS03125 (605984) | 605984..606160 | + | 177 | WP_000908084.1 | hypothetical protein | - |
| K9U08_RS03130 (606164) | 606164..606559 | + | 396 | WP_000634214.1 | hypothetical protein | - |
| K9U08_RS03135 (606559) | 606559..606942 | + | 384 | WP_000524260.1 | hypothetical protein | - |
| K9U08_RS03140 (606943) | 606943..607323 | + | 381 | WP_001029815.1 | hypothetical protein | - |
| K9U08_RS03145 (607320) | 607320..607712 | + | 393 | WP_000673077.1 | phage tail terminator-like protein | - |
| K9U08_RS03150 (607739) | 607739..608701 | + | 963 | WP_001328756.1 | phage tail tube protein | - |
| K9U08_RS03155 (608852) | 608852..609211 | + | 360 | WP_122452218.1 | protein YdaY | - |
| K9U08_RS03160 (609319) | 609319..609519 | + | 201 | WP_032139919.1 | hypothetical protein | - |
| K9U08_RS03165 (609683) | 609683..612916 | + | 3234 | WP_023153989.1 | phage tail tape measure protein | - |
| K9U08_RS03170 (612909) | 612909..613247 | + | 339 | WP_000024051.1 | phage tail protein | - |
| K9U08_RS03175 (613247) | 613247..613945 | + | 699 | WP_001152432.1 | phage minor tail protein L | - |
| K9U08_RS03180 (613951) | 613951..614694 | + | 744 | WP_001351716.1 | C40 family peptidase | - |
| K9U08_RS03185 (614691) | 614691..615232 | + | 542 | Protein_625 | tail assembly protein | - |
| K9U08_RS03190 (615293) | 615293..618772 | + | 3480 | WP_021523093.1 | host specificity protein J | - |
| K9U08_RS03195 (618840) | 618840..619439 | + | 600 | WP_001542091.1 | hypothetical protein | VF |
| K9U08_RS03200 (619504) | 619504..621879 | + | 2376 | WP_042099016.1 | prophage tail fiber N-terminal domain-containing protein | - |
| K9U08_RS03205 (621879) | 621879..622160 | + | 282 | WP_000654155.1 | hypothetical protein | - |
| K9U08_RS03210 (622170) | 622170..623210 | + | 1041 | WP_001314683.1 | tail fiber domain-containing protein | - |
| K9U08_RS03215 (623253) | 623253..623546 | + | 294 | WP_001405873.1 | hypothetical protein | - |
| K9U08_RS03220 (623816) | 623816..624002 | - | 187 | Protein_632 | DinI-like family protein | - |
| K9U08_RS03225 (624092) | 624092..624886 | - | 795 | WP_000354607.1 | hypothetical protein | - |
| K9U08_RS03230 (625359) | 625359..626216 | - | 858 | WP_000968125.1 | iron/manganese ABC transporter permease subunit SitD | - |
| K9U08_RS03235 (626213) | 626213..627070 | - | 858 | WP_001101728.1 | iron/manganese ABC transporter permease subunit SitC | - |
| K9U08_RS03240 (627067) | 627067..627894 | - | 828 | WP_000983718.1 | iron/manganese ABC transporter ATP-binding protein SitB | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|