MGE detailed information
MGE type: Genomic_island MGE length: 8133 bp
Accession: NZ_CP083492 Location: 3075013..3083145 Organism: Escherichia coli strain elppa8 Replicon: chromosome
Accession: NZ_CP083492 Location: 3075013..3083145 Organism: Escherichia coli strain elppa8 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| K9U11_RS14795 (3071645) | 3071645..3072220 | + | 576 | WP_228595199.1 | transcriptional regulator | - |
| K9U11_RS14805 (3073019) | 3073019..3074557 | + | 1539 | WP_228595200.1 | lysine decarboxylation/transport transcriptional activator CadC | - |
| K9U11_RS14815 (3075767) | 3075767..3077032 | + | 1266 | Protein_2892 | cadaverine/lysine antiporter | - |
| K9U11_RS14820 (3077112) | 3077112..3079259 | + | 2148 | Protein_2893 | lysine decarboxylase CadA | - |
| K9U11_RS14825 (3079318) | 3079318..3080775 | + | 1458 | WP_228595202.1 | dipeptide/tripeptide permease DtpC | - |
| K9U11_RS14830 (3081012) | 3081012..3082529 | + | 1518 | WP_228595203.1 | lysine--tRNA ligase | - |
| K9U11_RS14835 (3082648) | 3082648..3082821 | - | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
| K9U11_RS14840 (3082849) | 3082849..3083145 | - | 297 | WP_000398619.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
| K9U11_RS14845 (3083372) | 3083372..3083644 | - | 273 | WP_000405651.1 | GNAT family N-acetyltransferase | - |
| K9U11_RS14850 (3083656) | 3083656..3083886 | - | 231 | WP_000371704.1 | 4Fe-4S mono-cluster protein YjdI | - |
| K9U11_RS14855 (3084067) | 3084067..3085698 | + | 1632 | WP_001216477.1 | sensor histidine kinase | - |
| K9U11_RS14860 (3085695) | 3085695..3086414 | + | 720 | WP_000611288.1 | two-component system response regulator DcuR | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli str. K-12 substr. MC4100 | Genomic island | TA20087 | HG738867 | 4238430..4247780 | 0.009 | |
| Escherichia coli str. K-12 substr. W3110 | Genomic island | TA21458 | NC_007779 | 4357262..4366612 | 0.009 | |
| Escherichia coli BW2952 | Genomic island | TA23874 | NC_012759 | 4289342..4298692 | 0.009 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Genomic island | TA285032 | NZ_HG738867 | 4238430..4247780 | 0.009 |