MGE detailed information
MGE type: Genomic_island MGE length: 34865 bp
Accession: NZ_CP083492 Location: 2507517..2542381 Organism: Escherichia coli strain elppa8 Replicon: chromosome
Accession: NZ_CP083492 Location: 2507517..2542381 Organism: Escherichia coli strain elppa8 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| K9U11_RS12015 (2502542) | 2502542..2503849 | - | 1308 | WP_000022200.1 | sugar ABC transporter permease | - |
| K9U11_RS12020 (2503912) | 2503912..2505144 | - | 1233 | WP_000742442.1 | maltodextrin ABC transporter substrate-binding protein | - |
| K9U11_RS12025 (2505501) | 2505501..2506608 | + | 1108 | Protein_2350 | ABC transporter ATP-binding protein | - |
| K9U11_RS12030 (2506752) | 2506752..2506982 | + | 231 | Protein_2351 | IS4/IS5 family transposase | - |
| K9U11_RS12035 (2507061) | 2507061..2507180 | + | 120 | Protein_2352 | IS481 family transposase | - |
| K9U11_RS12040 (2507674) | 2507674..2509008 | + | 1335 | Protein_2353 | Group II intron-encoded protein LtrA | VF |
| K9U11_RS12045 (2509334) | 2509334..2509897 | - | 564 | WP_000282099.1 | inovirus-type Gp2 protein | - |
| K9U11_RS12050 (2510756) | 2510756..2512189 | - | 1434 | WP_042047126.1 | YfjI family protein | - |
| K9U11_RS12055 (2512402) | 2512402..2512551 | - | 150 | WP_001333414.1 | DUF3987 domain-containing protein | - |
| K9U11_RS12060 (2512763) | 2512763..2512990 | - | 228 | WP_000270169.1 | AlpA family phage regulatory protein | - |
| K9U11_RS12065 (2513683) | 2513683..2515314 | + | 1632 | WP_001310566.1 | hypothetical protein | - |
| K9U11_RS12070 (2515401) | 2515401..2515982 | - | 582 | WP_001310565.1 | hypothetical protein | - |
| K9U11_RS12080 (2516498) | 2516498..2517751 | - | 1254 | WP_000893278.1 | glutamate-5-semialdehyde dehydrogenase | - |
| K9U11_RS12085 (2517763) | 2517763..2518866 | - | 1104 | WP_001285288.1 | glutamate 5-kinase | - |
| K9U11_RS12090 (2519154) | 2519154..2520209 | + | 1056 | WP_000749863.1 | phosphoporin PhoE | - |
| K9U11_RS12095 (2520248) | 2520248..2520649 | - | 402 | WP_000174677.1 | sigma factor-binding protein Crl | - |
| - (2521367) | 2521367..2521447 | - | 81 | NuclAT_11 | - | - |
| - (2521367) | 2521367..2521447 | - | 81 | NuclAT_11 | - | - |
| - (2521367) | 2521367..2521447 | - | 81 | NuclAT_11 | - | - |
| - (2521367) | 2521367..2521447 | - | 81 | NuclAT_11 | - | - |
| K9U11_RS12100 (2520707) | 2520707..2521951 | - | 1245 | WP_228595105.1 | esterase FrsA | - |
| K9U11_RS12105 (2522043) | 2522043..2522501 | - | 459 | WP_001291990.1 | xanthine phosphoribosyltransferase | - |
| K9U11_RS12110 (2522762) | 2522762..2524219 | + | 1458 | WP_001292994.1 | cytosol nonspecific dipeptidase | - |
| K9U11_RS12115 (2524276) | 2524276..2524797 | - | 522 | Protein_2367 | peptide chain release factor H | - |
| K9U11_RS12120 (2524793) | 2524793..2524999 | - | 207 | Protein_2368 | RtcB family protein | - |
| K9U11_RS12125 (2525317) | 2525317..2525769 | - | 453 | WP_001059892.1 | GNAT family N-acetyltransferase | - |
| K9U11_RS12130 (2525779) | 2525779..2526177 | - | 399 | WP_001263489.1 | type II toxin-antitoxin system mRNA interferase toxin YafO | Toxin Detail |
| K9U11_RS12135 (2526180) | 2526180..2526473 | - | 294 | WP_000554758.1 | type I toxin-antitoxin system antitoxin YafN | Antitoxin Detail |
| K9U11_RS12140 (2526525) | 2526525..2527580 | - | 1056 | WP_228595106.1 | DNA polymerase IV | - |
| K9U11_RS12145 (2527651) | 2527651..2528436 | - | 786 | WP_000207552.1 | Chemotaxis protein LafU | VF |
| K9U11_RS12150 (2528408) | 2528408..2530120 | + | 1713 | Protein_2374 | Flagellar biosynthesis protein FlhA | VF |
| K9U11_RS12155 (2530344) | 2530344..2530841 | - | 498 | WP_000006255.1 | REP-associated tyrosine transposase RayT | - |
| K9U11_RS12160 (2531017) | 2531017..2531766 | - | 750 | WP_228595901.1 | Murein DD-endopeptidase MepH | VF |
| K9U11_RS12165 (2531976) | 2531976..2532236 | + | 261 | WP_228595107.1 | type II toxin-antitoxin system antitoxin DinJ | Antitoxin Detail |
| K9U11_RS12170 (2532239) | 2532239..2532517 | + | 279 | WP_000615983.1 | type II toxin-antitoxin system mRNA interferase toxin YafQ | Toxin Detail |
| K9U11_RS12175 (2532673) | 2532673..2533413 | + | 741 | WP_001225679.1 | peptidoglycan meso-diaminopimelic acid protein amidase | - |
| K9U11_RS12180 (2533384) | 2533384..2534151 | - | 768 | WP_000333380.1 | class II glutamine amidotransferase | - |
| K9U11_RS12185 (2534357) | 2534357..2534935 | - | 579 | WP_000284050.1 | Phosphoheptose isomerase | VF |
| K9U11_RS12190 (2535175) | 2535175..2537619 | + | 2445 | WP_228595108.1 | Acyl-coenzyme A dehydrogenase | VF |
| K9U11_RS12195 (2537662) | 2537662..2538108 | - | 447 | WP_059328196.1 | Ivy family C-type lysozyme inhibitor | - |
| K9U11_RS12200 (2538289) | 2538289..2539059 | + | 771 | WP_001118036.1 | 2-oxoglutaramate amidase | - |
| K9U11_RS12205 (2539245) | 2539245..2540452 | + | 1208 | Protein_2385 | IS256 family transposase IS1414 | Transposase |
| K9U11_RS12210 (2540440) | 2540440..2541558 | - | 1119 | WP_228595109.1 | ISAs1 family transposase ISEc1 | Transposase |
| K9U11_RS12215 (2541989) | 2541989..2542381 | - | 393 | WP_001101839.1 | hypothetical protein | - |
| K9U11_RS12220 (2542359) | 2542359..2546591 | - | 4233 | WP_228595110.1 | RHS element core protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|