MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 43613 bp
Accession: NZ_CP083490 Location: 1..43613 Organism: Escherichia coli strain elppa9 Replicon: plasmid unnamed9
Accession: NZ_CP083490 Location: 1..43613 Organism: Escherichia coli strain elppa9 Replicon: plasmid unnamed9
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| K9U12_RS26675 (1) | 1..387 | + | 387 | Protein_0 | conjugal transfer protein TraC | - |
| K9U12_RS26680 (560) | 560..1111 | + | 552 | WP_000744644.1 | hypothetical protein | - |
| K9U12_RS26685 (1273) | 1273..1527 | + | 255 | WP_001136187.1 | PilI type IV pilus biogenesis protein | - |
| K9U12_RS26690 (1700) | 1700..1996 | + | 297 | WP_000494779.1 | hypothetical protein | - |
| K9U12_RS26695 (2620) | 2620..3687 | + | 1068 | WP_001302629.1 | type IV pilus biogenesis lipoprotein PilL | - |
| K9U12_RS26700 (3687) | 3687..4124 | + | 438 | WP_000539807.1 | type IV pilus biogenesis protein PilM | - |
| K9U12_RS26705 (4138) | 4138..5820 | + | 1683 | WP_000748143.1 | PilN family type IVB pilus formation outer membrane protein | - |
| K9U12_RS26710 (5813) | 5813..7108 | + | 1296 | WP_000752772.1 | type 4b pilus protein PilO2 | - |
| K9U12_RS26715 (7095) | 7095..7547 | + | 453 | WP_001247334.1 | type IV pilus biogenesis protein PilP | - |
| K9U12_RS26720 (7558) | 7558..9111 | + | 1554 | WP_000362202.1 | ATPase, T2SS/T4P/T4SS family | - |
| K9U12_RS26725 (9124) | 9124..10221 | + | 1098 | WP_001208805.1 | type II secretion system F family protein | - |
| K9U12_RS26730 (10239) | 10239..10853 | + | 615 | WP_000959785.1 | type 4 pilus major pilin | - |
| K9U12_RS26735 (10863) | 10863..11423 | + | 561 | WP_000014116.1 | lytic transglycosylase domain-containing protein | - |
| K9U12_RS26740 (11408) | 11408..12064 | + | 657 | WP_001193553.1 | prepilin peptidase | - |
| K9U12_RS26745 (12064) | 12064..13356 | + | 1293 | WP_228571364.1 | shufflon system plasmid conjugative transfer pilus tip adhesin PilV | - |
| K9U12_RS26750 (13353) | 13353..13601 | - | 249 | WP_228571365.1 | hypothetical protein | - |
| K9U12_RS26755 (14793) | 14793..15947 | + | 1155 | WP_001139957.1 | site-specific integrase | - |
| K9U12_RS26760 (16098) | 16098..16922 | + | 825 | WP_165885055.1 | conjugal transfer protein TraE | - |
| K9U12_RS26765 (17008) | 17008..18210 | + | 1203 | WP_000976351.1 | conjugal transfer protein TraF | - |
| K9U12_RS26770 (18270) | 18270..18854 | + | 585 | WP_000977522.1 | histidine phosphatase family protein | - |
| K9U12_RS26775 (19249) | 19249..19707 | + | 459 | WP_001079808.1 | IncI1-type conjugal transfer lipoprotein TraH | - |
| K9U12_RS26780 (19704) | 19704..20522 | + | 819 | WP_000646098.1 | IncI1-type conjugal transfer lipoprotein TraI | - |
| K9U12_RS26785 (20519) | 20519..21667 | + | 1149 | WP_001024972.1 | plasmid transfer ATPase TraJ | - |
| K9U12_RS26790 (21664) | 21664..21954 | + | 291 | WP_001299214.1 | hypothetical protein | - |
| K9U12_RS26795 (21969) | 21969..22520 | + | 552 | WP_000014584.1 | phospholipase D family protein | - |
| K9U12_RS26800 (22610) | 22610..26377 | + | 3768 | WP_228571366.1 | DUF5710 domain-containing protein | - |
| K9U12_RS26805 (26395) | 26395..26742 | + | 348 | WP_001055900.1 | conjugal transfer protein | - |
| K9U12_RS26810 (26739) | 26739..27431 | + | 693 | WP_000138552.1 | DotI/IcmL family type IV secretion protein | - |
| K9U12_RS26815 (27442) | 27442..28425 | + | 984 | WP_001191880.1 | IncI1-type conjugal transfer protein TraN | - |
| K9U12_RS26820 (28428) | 28428..29717 | + | 1290 | WP_011264042.1 | conjugal transfer protein TraO | - |
| K9U12_RS26825 (29717) | 29717..30421 | + | 705 | WP_001493811.1 | IncI1-type conjugal transfer protein TraP | - |
| K9U12_RS26830 (30421) | 30421..30948 | + | 528 | WP_001055569.1 | conjugal transfer protein TraQ | - |
| K9U12_RS26835 (30999) | 30999..31403 | + | 405 | WP_000086965.1 | IncI1-type conjugal transfer protein TraR | - |
| K9U12_RS26840 (31467) | 31467..31655 | + | 189 | WP_001277255.1 | putative conjugal transfer protein TraS | - |
| K9U12_RS26845 (31639) | 31639..32439 | + | 801 | WP_001164788.1 | IncI1-type conjugal transfer protein TraT | - |
| K9U12_RS26850 (32529) | 32529..35573 | + | 3045 | WP_023518848.1 | IncI1-type conjugal transfer protein TraU | - |
| K9U12_RS26855 (35573) | 35573..36187 | + | 615 | WP_000337399.1 | IncI1-type conjugal transfer protein TraV | - |
| K9U12_RS26860 (36154) | 36154..37356 | + | 1203 | WP_001189160.1 | IncI1-type conjugal transfer protein TraW | - |
| K9U12_RS26865 (37385) | 37385..37969 | + | 585 | WP_001746157.1 | IncI1-type conjugal transfer protein TraX | - |
| K9U12_RS26870 (38066) | 38066..40234 | + | 2169 | WP_023518847.1 | DotA/TraY family protein | - |
| K9U12_RS26875 (40305) | 40305..40967 | + | 663 | WP_000644796.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| K9U12_RS26880 (41039) | 41039..41248 | - | 210 | WP_000062603.1 | HEAT repeat domain-containing protein | - |
| K9U12_RS26885 (41640) | 41640..41816 | + | 177 | WP_001054897.1 | hypothetical protein | - |
| K9U12_RS26890 (41881) | 41881..42177 | - | 297 | WP_011264046.1 | DinQ-like type I toxin DqlB | - |
| K9U12_RS26895 (42477) | 42477..42728 | + | 252 | WP_001291964.1 | hypothetical protein | - |
| K9U12_RS26900 (42800) | 42800..42952 | - | 153 | WP_001387489.1 | Hok/Gef family protein | Toxin Detail |
| - (43004) | 43004..43064 | + | 61 | NuclAT_0 | - | Antitoxin Detail |
| - (43004) | 43004..43064 | + | 61 | NuclAT_0 | - | Antitoxin Detail |
| - (43004) | 43004..43064 | + | 61 | NuclAT_0 | - | Antitoxin Detail |
| - (43004) | 43004..43064 | + | 61 | NuclAT_0 | - | Antitoxin Detail |
| K9U12_RS26905 (43273) | 43273..43613 | + | 341 | Protein_46 | protein finQ | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|