MGE detailed information
MGE type: Conjugative plasmid MGE length: 195834 bp
Accession: NZ_CP083375 Location: 1..195834 Organism: Ensifer canadensis strain T173 Replicon: plasmid pT173a
Accession: NZ_CP083375 Location: 1..195834 Organism: Ensifer canadensis strain T173 Replicon: plasmid pT173a
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| J3R84_RS37770 (J3R84_37495) | 1..10515 | + | 10515 | WP_239637615.1 | Polyketide synthase PksM | VF |
| J3R84_RS37775 | 10437..11714 | + | 1278 | WP_239637616.1 | Polyketide synthase PksL | VF |
| J3R84_RS37780 (J3R84_37500) | 11633..14434 | + | 2802 | WP_239637622.1 | Polyketide synthase PksN | VF |
| J3R84_RS37785 (J3R84_37505) | 14445..23999 | + | 9555 | WP_203528972.1 | Polyketide synthase PksJ | VF |
| J3R84_RS37790 (J3R84_37510) | 24850..26262 | + | 1413 | WP_203528971.1 | cytochrome P450 | - |
| J3R84_RS37795 (J3R84_37515) | 26490..27749 | + | 1260 | WP_207932913.1 | hydroxymethylglutaryl-CoA synthase family protein | - |
| J3R84_RS37800 (J3R84_37520) | 27746..28510 | + | 765 | WP_203528968.1 | enoyl-CoA hydratase/isomerase | - |
| J3R84_RS37805 (J3R84_37525) | 28635..28874 | + | 240 | WP_203528966.1 | acyl carrier protein | - |
| J3R84_RS37810 (J3R84_37530) | 28861..30108 | + | 1248 | WP_203528965.1 | beta-ketoacyl synthase N-terminal-like domain-containing protein | - |
| J3R84_RS37815 (J3R84_37535) | 30137..31276 | + | 1140 | WP_203528964.1 | Polyketide biosynthesis malonyl CoA-acyl carrier protein transacylase PksC | VF |
| J3R84_RS37820 (J3R84_37540) | 31288..32151 | + | 864 | WP_203528963.1 | 4'-phosphopantetheinyl transferase Sfp | VF |
| J3R84_RS37825 (J3R84_37545) | 32199..33143 | + | 945 | WP_203528962.1 | acyltransferase domain-containing protein | - |
| J3R84_RS37830 (J3R84_37550) | 33211..34581 | - | 1371 | WP_203528961.1 | dihydrolipoyl dehydrogenase | - |
| J3R84_RS37835 (J3R84_37555) | 34587..35894 | - | 1308 | WP_203528960.1 | dihydrolipoamide acetyltransferase family protein | - |
| J3R84_RS37840 (J3R84_37560) | 35895..36911 | - | 1017 | WP_203528959.1 | alpha-ketoacid dehydrogenase subunit beta | - |
| J3R84_RS37845 (J3R84_37565) | 36913..38148 | - | 1236 | WP_203528957.1 | thiamine pyrophosphate-dependent dehydrogenase E1 component subunit alpha | - |
| J3R84_RS37850 (J3R84_37570) | 38428..39384 | - | 957 | WP_203528955.1 | SAM-dependent methyltransferase | - |
| J3R84_RS37855 (J3R84_37575) | 39451..40194 | - | 744 | WP_225906431.1 | alpha/beta fold hydrolase | - |
| J3R84_RS37860 (J3R84_37580) | 40610..40984 | - | 375 | Protein_18 | IS66 family transposase ISRel8 | Transposase |
| J3R84_RS37865 (J3R84_37590) | 41467..42456 | - | 990 | WP_203528949.1 | IS91 family transposase ISAzo26 | Transposase |
| J3R84_RS37870 (J3R84_37595) | 42453..43367 | - | 915 | WP_203528947.1 | tyrosine-type recombinase/integrase | - |
| J3R84_RS37875 (J3R84_37600) | 43361..44605 | - | 1245 | WP_239637617.1 | tyrosine-type recombinase/integrase | - |
| J3R84_RS37880 (J3R84_37610) | 45412..45861 | - | 450 | WP_203528943.1 | hypothetical protein | - |
| J3R84_RS37885 (J3R84_37615) | 45914..46588 | + | 675 | WP_203528942.1 | Acyl-homoserine-lactone synthase | VF |
| J3R84_RS37890 (J3R84_37620) | 46721..47503 | - | 783 | WP_203528941.1 | HTH-type quorum sensing-dependent transcriptional regulator RpaR | VF |
| J3R84_RS37895 (J3R84_37625) | 48515..49608 | - | 1094 | Protein_25 | IS3 family transposase ISRel21 | Transposase |
| J3R84_RS37900 (J3R84_37630) | 49687..50439 | - | 753 | WP_203528940.1 | autoinducer binding domain-containing protein | - |
| J3R84_RS37905 (J3R84_37635) | 50569..50787 | - | 219 | WP_203528939.1 | CbtA family protein | - |
| J3R84_RS37910 (J3R84_37640) | 50837..52546 | - | 1710 | Protein_28 | ISL3 family transposase | - |
| J3R84_RS37915 (J3R84_37645) | 53015..54565 | - | 1551 | WP_225906424.1 | succinylglutamate desuccinylase/aspartoacylase family protein | - |
| J3R84_RS37920 (J3R84_37650) | 54683..55300 | - | 618 | WP_203528937.1 | GntR family transcriptional regulator | - |
| J3R84_RS37925 (J3R84_37655) | 55369..55818 | + | 450 | WP_203528935.1 | OsmC family protein | - |
| J3R84_RS37930 (J3R84_37660) | 56072..56755 | - | 684 | WP_207932914.1 | IS6 family transposase ISPpa9 | Transposase |
| J3R84_RS37935 (J3R84_37665) | 57127..59061 | + | 1935 | WP_203529591.1 | Methyl-accepting chemotaxis protein III | VF |
| J3R84_RS37940 | 59328..59789 | - | 462 | WP_225906493.1 | hypothetical protein | - |
| J3R84_RS37945 (J3R84_37670) | 59791..59986 | - | 196 | Protein_35 | IS6 family transposase | - |
| J3R84_RS37950 (J3R84_37675) | 60044..61192 | - | 1149 | WP_203529589.1 | hypothetical protein | - |
| J3R84_RS37955 (J3R84_37680) | 61472..61900 | + | 429 | WP_203529587.1 | SyrB-like regulator | - |
| J3R84_RS37960 (J3R84_37685) | 62049..62651 | + | 603 | WP_203529586.1 | hypothetical protein | - |
| J3R84_RS37965 (J3R84_37690) | 62682..63269 | + | 588 | WP_203529584.1 | hypothetical protein | - |
| J3R84_RS37970 (J3R84_37695) | 63290..63466 | - | 177 | WP_174014689.1 | hypothetical protein | - |
| J3R84_RS37975 (J3R84_37700) | 63931..64911 | + | 981 | WP_203529582.1 | 3'-5' exonuclease | - |
| J3R84_RS37980 (J3R84_37705) | 65082..65228 | + | 147 | WP_164049362.1 | DUF1127 domain-containing protein | - |
| J3R84_RS37985 (J3R84_37710) | 66008..66187 | + | 180 | WP_113552888.1 | hypothetical protein | - |
| J3R84_RS37990 (J3R84_37715) | 66363..67298 | + | 936 | WP_203529595.1 | DUF3991 and toprim domain-containing protein | - |
| J3R84_RS37995 (J3R84_37720) | 67429..68034 | + | 606 | WP_203529580.1 | DUF1419 domain-containing protein | - |
| J3R84_RS38000 (J3R84_37725) | 68140..73230 | + | 5091 | WP_203529578.1 | helicase-related protein | - |
| J3R84_RS38005 (J3R84_37730) | 73382..74836 | - | 1455 | WP_203529576.1 | ATP-binding protein | - |
| J3R84_RS38010 (J3R84_37735) | 75382..77097 | + | 1716 | WP_203529574.1 | ParB/RepB/Spo0J family partition protein | - |
| J3R84_RS38015 (J3R84_37740) | 77180..77830 | + | 651 | WP_203529572.1 | hypothetical protein | - |
| J3R84_RS38020 (J3R84_37745) | 78532..79116 | + | 585 | WP_203529570.1 | hypothetical protein | - |
| J3R84_RS38025 (J3R84_37750) | 79212..80039 | - | 828 | WP_203529568.1 | oxidoreductase | - |
| J3R84_RS38030 (J3R84_37755) | 80115..81047 | + | 933 | WP_203529566.1 | AraC family transcriptional regulator | - |
| J3R84_RS38035 (J3R84_37760) | 81466..81777 | + | 312 | WP_203529565.1 | DUF736 domain-containing protein | - |
| J3R84_RS38040 (J3R84_37765) | 81917..82972 | + | 1056 | WP_203529563.1 | DUF977 family protein | - |
| J3R84_RS38045 (J3R84_37770) | 83333..83644 | + | 312 | WP_125850942.1 | DUF736 domain-containing protein | - |
| J3R84_RS38050 (J3R84_37775) | 83693..83971 | - | 279 | WP_239637618.1 | HU family DNA-binding protein | - |
| J3R84_RS38055 (J3R84_37780) | 84028..84321 | - | 294 | WP_125850946.1 | WGR domain-containing protein | - |
| J3R84_RS38060 (J3R84_37785) | 84465..84686 | + | 222 | WP_125850948.1 | hypothetical protein | - |
| J3R84_RS38065 (J3R84_37790) | 84830..85099 | + | 270 | WP_203529559.1 | hypothetical protein | - |
| J3R84_RS38070 (J3R84_37795) | 85231..85632 | - | 402 | WP_203529557.1 | hypothetical protein | - |
| J3R84_RS38075 (J3R84_37800) | 85646..87616 | - | 1971 | WP_203529556.1 | Conjugal transfer protein TraG | VF |
| J3R84_RS38080 (J3R84_37805) | 87603..87818 | - | 216 | WP_203529554.1 | type IV conjugative transfer system coupling protein TraD | - |
| J3R84_RS38085 (J3R84_37810) | 87823..88119 | - | 297 | WP_203529552.1 | TraC family protein | - |
| J3R84_RS38090 (J3R84_37815) | 88366..91668 | + | 3303 | WP_203529550.1 | ATP-dependent RecD-like DNA helicase | Relaxase |
| J3R84_RS38095 (J3R84_37820) | 91665..92195 | + | 531 | WP_203529548.1 | conjugative transfer signal peptidase TraF | - |
| J3R84_RS38100 (J3R84_37825) | 92212..93360 | + | 1149 | WP_225968625.1 | conjugal transfer protein TraB | - |
| J3R84_RS38105 (J3R84_37830) | 93366..93983 | + | 618 | WP_203529538.1 | TraH family protein | - |
| J3R84_RS38110 (J3R84_37835) | 94113..94850 | + | 738 | WP_203529536.1 | LuxR family transcriptional regulator | - |
| J3R84_RS38115 (J3R84_37840) | 95088..96137 | + | 1050 | WP_203529534.1 | class I SAM-dependent methyltransferase | - |
| J3R84_RS38120 (J3R84_37845) | 96169..97575 | + | 1407 | WP_203529532.1 | hypothetical protein | - |
| J3R84_RS38125 (J3R84_37850) | 97705..98211 | + | 507 | WP_203529530.1 | GNAT family N-acetyltransferase | - |
| J3R84_RS38130 (J3R84_37855) | 98353..98661 | - | 309 | WP_037197787.1 | helix-turn-helix transcriptional regulator | - |
| J3R84_RS38135 (J3R84_37860) | 98683..100005 | - | 1323 | WP_203529529.1 | HipA domain-containing protein | - |
| J3R84_RS38140 (J3R84_37865) | 100248..100652 | - | 405 | WP_203529527.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| J3R84_RS38145 (J3R84_37870) | 100649..100918 | - | 270 | WP_203529525.1 | antitoxin | Antitoxin Detail |
| J3R84_RS38150 (J3R84_37875) | 101064..101309 | - | 246 | WP_037221867.1 | transcriptional regulator | - |
| J3R84_RS38155 (J3R84_37880) | 101434..101973 | + | 540 | WP_203529523.1 | hypothetical protein | - |
| J3R84_RS38160 (J3R84_37885) | 102170..103762 | + | 1593 | WP_203529520.1 | ABC transporter substrate-binding protein | - |
| J3R84_RS38165 (J3R84_37890) | 103769..104746 | + | 978 | WP_203529519.1 | ABC transporter permease | - |
| J3R84_RS38170 (J3R84_37895) | 104758..105633 | + | 876 | WP_203529517.1 | ABC transporter permease | - |
| J3R84_RS38175 (J3R84_37900) | 105630..107300 | + | 1671 | WP_203529515.1 | Glutathione import ATP-binding protein GsiA | VF |
| J3R84_RS38180 (J3R84_37905) | 107393..108637 | + | 1245 | WP_203529513.1 | Capsule biosynthesis protein CapA | VF |
| J3R84_RS38185 (J3R84_37910) | 108729..109976 | + | 1248 | WP_203529593.1 | peptidase T | - |
| J3R84_RS38190 (J3R84_37915) | 110076..110342 | - | 267 | WP_203529511.1 | helix-turn-helix transcriptional regulator | - |
| J3R84_RS38195 (J3R84_37920) | 110595..110903 | + | 309 | WP_203529509.1 | transcriptional repressor TraM | - |
| J3R84_RS38200 (J3R84_37925) | 110907..111611 | - | 705 | WP_203529507.1 | transcriptional regulator TraR | - |
| J3R84_RS38205 (J3R84_37930) | 112188..113156 | + | 969 | WP_203529974.1 | Transcriptional activator FeaR | VF |
| J3R84_RS38210 (J3R84_37935) | 113349..114263 | - | 915 | WP_203529975.1 | Hydrogen peroxide-inducible genes activator | VF |
| J3R84_RS38215 (J3R84_37940) | 114341..115279 | - | 939 | WP_203529976.1 | hydroxymethylbilane synthase | - |
| J3R84_RS38220 (J3R84_37945) | 115413..117581 | - | 2169 | WP_203529977.1 | Catalase-peroxidase 1 | VF |
| J3R84_RS38225 (J3R84_37950) | 117798..118019 | - | 222 | WP_203529978.1 | hypothetical protein | - |
| J3R84_RS38230 (J3R84_37955) | 118145..119197 | - | 1053 | Protein_92 | Methyl-accepting chemotaxis protein II | VF |
| J3R84_RS38235 (J3R84_37960) | 119295..119852 | + | 558 | WP_203529979.1 | hypothetical protein | - |
| J3R84_RS38240 | 120082..120363 | - | 282 | WP_225906554.1 | 3'-5' exonuclease | - |
| J3R84_RS38245 (J3R84_37970) | 120409..120783 | + | 375 | WP_203529980.1 | hypothetical protein | - |
| J3R84_RS38250 (J3R84_37975) | 120927..121025 | - | 99 | Protein_96 | IS21 family transposase ISPve1 | Transposase |
| J3R84_RS38255 (J3R84_37980) | 121074..121785 | + | 712 | Protein_97 | IS6 family transposase | - |
| J3R84_RS38260 (J3R84_37985) | 121930..122898 | - | 969 | WP_203529981.1 | Polyketide biosynthesis acyltransferase PksD | VF |
| J3R84_RS38265 (J3R84_37990) | 122918..123913 | - | 996 | WP_203529982.1 | acyltransferase domain-containing protein | - |
| J3R84_RS38270 (J3R84_37995) | 123949..125250 | - | 1302 | WP_203529983.1 | IncP-type conjugal transfer protein TrbI | - |
| J3R84_RS38275 (J3R84_38000) | 125262..125711 | - | 450 | WP_203529984.1 | conjugal transfer protein TrbH | - |
| J3R84_RS38280 (J3R84_38005) | 125711..126556 | - | 846 | WP_203529985.1 | P-type conjugative transfer protein TrbG | - |
| J3R84_RS38285 (J3R84_38010) | 126574..127239 | - | 666 | WP_203529986.1 | conjugal transfer protein TrbF | - |
| J3R84_RS38290 (J3R84_38015) | 127270..128466 | - | 1197 | WP_203529987.1 | P-type conjugative transfer protein TrbL | - |
| J3R84_RS38295 (J3R84_38025) | 128684..129460 | - | 777 | WP_203529989.1 | P-type conjugative transfer protein TrbJ | - |
| J3R84_RS38300 (J3R84_38030) | 129465..131927 | - | 2463 | WP_203529997.1 | conjugal transfer protein TrbE | - |
| J3R84_RS38305 (J3R84_38035) | 131930..132229 | - | 300 | WP_203529990.1 | conjugal transfer protein TrbD | - |
| J3R84_RS38310 (J3R84_38040) | 132222..132593 | - | 372 | WP_239637621.1 | conjugal transfer pilin TrbC | - |
| J3R84_RS38315 (J3R84_38045) | 132619..133590 | - | 972 | WP_203529992.1 | Type IV secretion system protein VirB11 | VF |
| J3R84_RS38320 (J3R84_38050) | 133587..134222 | - | 636 | WP_203529993.1 | Acyl-homoserine-lactone synthase | VF |
| J3R84_RS38325 (J3R84_38055) | 134583..135797 | + | 1215 | WP_203529994.1 | Cell division protein PomZ | VF |
| J3R84_RS38330 (J3R84_38060) | 135824..136834 | + | 1011 | WP_225906555.1 | plasmid partitioning protein RepB | - |
| J3R84_RS38335 (J3R84_38065) | 137076..138356 | + | 1281 | WP_207932912.1 | plasmid replication protein RepC | - |
| J3R84_RS38340 (J3R84_38070) | 138742..138975 | - | 234 | WP_203529001.1 | hypothetical protein | - |
| J3R84_RS38345 | 139217..139828 | - | 612 | WP_225906429.1 | Adenosine monophosphate-protein transferase SoFic | VF |
| J3R84_RS38350 | 139991..140179 | - | 189 | WP_225906428.1 | Fic/DOC family N-terminal domain-containing protein | - |
| J3R84_RS38355 | 140436..140543 | - | 108 | Protein_117 | recombinase family protein | - |
| J3R84_RS38360 (J3R84_38080) | 140954..141376 | + | 423 | WP_203528998.1 | DUF4168 domain-containing protein | - |
| J3R84_RS38365 (J3R84_38085) | 141699..142376 | - | 678 | WP_203528997.1 | hypothetical protein | - |
| J3R84_RS38370 (J3R84_38090) | 142567..143394 | - | 828 | WP_203528996.1 | signal peptidase I | - |
| J3R84_RS38375 (J3R84_38095) | 143464..144639 | - | 1176 | WP_203528995.1 | tyrosine-type recombinase/integrase | - |
| J3R84_RS38380 (J3R84_38100) | 144636..145040 | - | 405 | WP_203528994.1 | type II toxin-antitoxin system VapC family toxin | - |
| J3R84_RS38385 (J3R84_38105) | 145037..145294 | - | 258 | WP_203528992.1 | type II toxin-antitoxin system VapB family antitoxin | - |
| J3R84_RS38390 (J3R84_38110) | 145618..146757 | + | 1140 | WP_203528990.1 | RHE_PE00001 family protein | - |
| J3R84_RS38395 (J3R84_38115) | 147071..147931 | + | 861 | WP_203528988.1 | hypothetical protein | - |
| J3R84_RS38400 (J3R84_38120) | 147924..151076 | + | 3153 | WP_203528987.1 | DEAD/DEAH box helicase | - |
| J3R84_RS38405 (J3R84_38125) | 151081..151830 | + | 750 | WP_203528985.1 | DCL family protein | - |
| J3R84_RS38410 (J3R84_38130) | 152099..152248 | + | 150 | Protein_128 | IS3 family transposase | - |
| J3R84_RS38415 (J3R84_38135) | 152310..152789 | - | 480 | WP_203528983.1 | hypothetical protein | - |
| J3R84_RS38420 (J3R84_38140) | 152795..152992 | - | 198 | WP_203529000.1 | hypothetical protein | - |
| J3R84_RS38425 (J3R84_38145) | 153028..153822 | - | 795 | WP_203528981.1 | IS21 family transposase ISRsp3 | Transposase |
| J3R84_RS38430 (J3R84_38150) | 153812..155332 | - | 1521 | WP_203528979.1 | IS21 family transposase ISRsp3 | Transposase |
| J3R84_RS38435 (J3R84_38155) | 155432..155665 | + | 234 | WP_203528977.1 | hypothetical protein | - |
| J3R84_RS38440 (J3R84_38160) | 155948..156333 | - | 386 | Protein_134 | IS3 family transposase IS868 | Transposase |
| J3R84_RS38445 (J3R84_38165) | 156700..171774 | + | 15075 | WP_203528975.1 | Polyketide synthase PksM | VF |
| J3R84_RS38450 | 172005..195785 | + | 23781 | WP_203528974.1 | Polyketide synthase PksM | VF |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|