MGE detailed information
MGE type: Genomic_island MGE length: 45944 bp
Accession: NZ_CP083361 Location: 3501434..3547377 Organism: Vibrio parahaemolyticus strain 20-082E4 Replicon: chromosome
Accession: NZ_CP083361 Location: 3501434..3547377 Organism: Vibrio parahaemolyticus strain 20-082E4 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| K9N54_RS16830 (K9N54_16715) | 3497216..3499156 | - | 1941 | WP_025548309.1 | phosphomethylpyrimidine synthase ThiC | - |
| K9N54_RS16835 (K9N54_16720) | 3499485..3499868 | - | 384 | WP_005497358.1 | fluoride efflux transporter CrcB | - |
| K9N54_RS16840 | 3500177..3500296 | + | 120 | Protein_3216 | helix-turn-helix domain-containing protein | - |
| K9N54_RS16845 (K9N54_16725) | 3501119..3501370 | + | 252 | WP_031854775.1 | helix-turn-helix domain-containing protein | - |
| K9N54_RS16850 (K9N54_16730) | 3501434..3502189 | - | 756 | WP_052143263.1 | hypothetical protein | - |
| K9N54_RS16855 (K9N54_16735) | 3502186..3502602 | - | 417 | WP_033931519.1 | hypothetical protein | - |
| K9N54_RS16860 (K9N54_16740) | 3502599..3503723 | - | 1125 | WP_102589961.1 | hypothetical protein | - |
| K9N54_RS16865 (K9N54_16745) | 3504126..3504653 | - | 528 | WP_033931516.1 | hypothetical protein | - |
| K9N54_RS16870 (K9N54_16750) | 3504698..3505714 | - | 1017 | WP_196952895.1 | hypothetical protein | - |
| K9N54_RS16875 (K9N54_16755) | 3505785..3507302 | - | 1518 | WP_156216674.1 | hypothetical protein | - |
| K9N54_RS16880 (K9N54_16760) | 3507400..3508500 | - | 1101 | WP_033931513.1 | Tn3 family transposase TnpR_ISNpu13 | Transposase |
| K9N54_RS16885 (K9N54_16765) | 3508809..3509048 | - | 240 | WP_001084862.1 | helix-turn-helix domain-containing protein | - |
| K9N54_RS16890 (K9N54_16770) | 3509564..3509893 | + | 330 | WP_156216673.1 | hypothetical protein | - |
| K9N54_RS16895 (K9N54_16775) | 3510061..3510354 | + | 294 | WP_033931510.1 | hypothetical protein | - |
| K9N54_RS16900 (K9N54_16780) | 3510483..3513599 | - | 3117 | WP_156216671.1 | HsdR family type I site-specific deoxyribonuclease | - |
| K9N54_RS16905 (K9N54_16785) | 3513717..3514997 | - | 1281 | WP_052143261.1 | restriction endonuclease subunit S | - |
| K9N54_RS16910 (K9N54_16790) | 3514990..3517014 | - | 2025 | WP_224067120.1 | type I restriction-modification system subunit M | - |
| K9N54_RS16915 (K9N54_16795) | 3517198..3517581 | - | 384 | WP_156216644.1 | DUF6262 family protein | - |
| K9N54_RS16920 (K9N54_16800) | 3517578..3519578 | - | 2001 | WP_156216642.1 | hypothetical protein ; Integrase | Integrase |
| K9N54_RS16925 (K9N54_16805) | 3519575..3522184 | - | 2610 | WP_156216640.1 | hypothetical protein | - |
| K9N54_RS16930 (K9N54_16810) | 3522174..3523559 | - | 1386 | WP_156216638.1 | IS91 family transposase ISTha3 | Transposase |
| K9N54_RS16935 (K9N54_16815) | 3523702..3524289 | + | 588 | WP_156216636.1 | restriction endonuclease subunit S | - |
| K9N54_RS16940 (K9N54_16820) | 3524362..3525885 | + | 1524 | WP_156216634.1 | type I restriction-modification system subunit M | - |
| K9N54_RS16945 (K9N54_16825) | 3525875..3527092 | + | 1218 | WP_156216633.1 | restriction endonuclease subunit S | - |
| K9N54_RS16950 (K9N54_16830) | 3527106..3529673 | + | 2568 | WP_156216631.1 | AAA family ATPase | - |
| K9N54_RS16955 (K9N54_16835) | 3529717..3532998 | + | 3282 | WP_156216629.1 | type I restriction endonuclease subunit R | - |
| K9N54_RS16960 (K9N54_16840) | 3533013..3533762 | + | 750 | WP_156216627.1 | SprT family zinc-dependent metalloprotease | - |
| K9N54_RS16965 (K9N54_16845) | 3533788..3534384 | + | 597 | WP_107111805.1 | pancortin-3 | - |
| K9N54_RS16970 (K9N54_16850) | 3534384..3535496 | + | 1113 | WP_156216625.1 | hypothetical protein | - |
| K9N54_RS16975 (K9N54_16855) | 3535535..3535747 | - | 213 | WP_033929743.1 | helix-turn-helix transcriptional regulator | - |
| K9N54_RS16980 (K9N54_16860) | 3536051..3536326 | + | 276 | WP_156216623.1 | hypothetical protein | - |
| K9N54_RS16985 (K9N54_16865) | 3536398..3536964 | - | 567 | Protein_3245 | type I restriction-modification system subunit M N-terminal domain-containing protein | - |
| K9N54_RS16990 (K9N54_16870) | 3536973..3537914 | - | 942 | WP_156216669.1 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | Toxin Detail |
| K9N54_RS16995 (K9N54_16875) | 3537917..3538321 | - | 405 | WP_000127617.1 | DUF6088 family protein | Antitoxin Detail |
| K9N54_RS17000 (K9N54_16880) | 3538583..3538771 | - | 189 | WP_000342585.1 | hypothetical protein | - |
| K9N54_RS17005 (K9N54_16885) | 3538781..3539164 | - | 384 | WP_156216668.1 | hypothetical protein | - |
| K9N54_RS17010 (K9N54_16890) | 3539157..3540500 | - | 1344 | WP_156216666.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| K9N54_RS17050 (K9N54_16930) | 3546558..3547106 | + | 549 | WP_024699628.1 | Carnitine operon protein CaiE | VF |
| K9N54_RS17055 (K9N54_16935) | 3547114..3547377 | - | 264 | WP_005497408.1 | DUF1488 domain-containing protein | - |
| K9N54_RS17060 (K9N54_16940) | 3547381..3548214 | - | 834 | WP_015297507.1 | shikimate dehydrogenase | - |
| K9N54_RS17065 (K9N54_16945) | 3548316..3549233 | - | 918 | WP_024699626.1 | oxygen-dependent coproporphyrinogen oxidase | - |
| K9N54_RS17070 (K9N54_16950) | 3549281..3549838 | - | 558 | WP_005461456.1 | L-threonylcarbamoyladenylate synthase | - |
| K9N54_RS17075 (K9N54_16955) | 3550038..3550523 | + | 486 | WP_005394016.1 | 5-(carboxyamino)imidazole ribonucleotide mutase | - |
| K9N54_RS17080 (K9N54_16960) | 3550528..3551655 | + | 1128 | WP_025793165.1 | 5-(carboxyamino)imidazole ribonucleotide synthase | - |
| K9N54_RS17085 (K9N54_16965) | 3551725..3552294 | - | 570 | WP_025793166.1 | topoisomerase DNA-binding C4 zinc finger domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|